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Moc07g03430 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g03430
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr7:2976614..2977836
RNA-Seq ExpressionMoc07g03430
SyntenyMoc07g03430
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152233.1 uncharacterized protein LOC111020002 [Momordica charantia]1.2e-4154.36Show/hide
Query:  VKVLNEPSIDQPEMMEVQLTQPTWMDPIKNFLSGITPTDTSEARKVRRQATHYIVQDDKLYKRGFSLPLLQCLGPDEASYVIQEVHEGISRNHVGARCDN
        V++L+ PSI  PE+ME+    P+WMDPI  F+ GI+P D++E +K+ R+A  +I++D  LY+RGFSLPLL C+ P E  Y+++E+HEG ++  V   CDN
Subjt:  VKVLNEPSIDQPEMMEVQLTQPTWMDPIKNFLSGITPTDTSEARKVRRQATHYIVQDDKLYKRGFSLPLLQCLGPDEASYVIQEVHEGISRNHVGARCDN

Query:  CPRFANGLQQSSELLTPISSRWPFAQWGLDLIGPLPTAKGQVKYVVVRV
        C RFAN + Q  ELLTPIS  WPFAQWG+D+IGP P  KGQ K+VVV V
Subjt:  CPRFANGLQQSSELLTPISSRWPFAQWGLDLIGPLPTAKGQVKYVVVRV

XP_022156986.1 uncharacterized protein LOC111023816 [Momordica charantia]2.1e-4653.41Show/hide
Query:  VKVLNEPSIDQPEMMEVQLTQPTWMDPIKNFL-SGITPTDTSEARKVRRQATHYIVQDDKLYKRGFSLPLLQCLGPDEASYVIQEVHEGISRNHVGAR--
        V++L E S+DQPE+ME+   QPTWMDPIK+FL +G  P D S+ARK+RRQA HY++Q+ KL+KRG+SLPLL+CL P+EA YV++E+HEG+  NH GA+  
Subjt:  VKVLNEPSIDQPEMMEVQLTQPTWMDPIKNFL-SGITPTDTSEARKVRRQATHYIVQDDKLYKRGFSLPLLQCLGPDEASYVIQEVHEGISRNHVGAR--

Query:  ------------------------CDNCPRFANGLQQSSELLTPISSRWPFAQWGLDLIGPLPTAKGQVKYVVVRV
                                CD C RFA+ L+Q  E+LT ISS WPFAQWG+DLIGPLP  KGQ+K+ +V V
Subjt:  ------------------------CDNCPRFANGLQQSSELLTPISSRWPFAQWGLDLIGPLPTAKGQVKYVVVRV

XP_022157626.1 uncharacterized protein LOC111024288 [Momordica charantia]4.5e-4147.73Show/hide
Query:  MLVKVLNEPSIDQPEMMEVQLTQPTWMDPIKNFLSGITPTDTSEARKVRRQATHYIVQDDKLYKRGFSLPLLQCLGPDEASYVIQEVHEGISRNHVGAR-
        +LVK+L+ PSI + +MMEV     +WMDPI+NFL G  P +  EA+K+RR+   Y+++D+ +Y+RGFSLPLL+C+  ++ SYV++EVHEG+  NH+GAR 
Subjt:  MLVKVLNEPSIDQPEMMEVQLTQPTWMDPIKNFLSGITPTDTSEARKVRRQATHYIVQDDKLYKRGFSLPLLQCLGPDEASYVIQEVHEGISRNHVGAR-

Query:  -------------------------CDNCPRFANGLQQSSELLTPISSRWPFAQWGLDLIGPLPTAKGQVKYVVVR
                                 CDNC RFAN + Q  ELLTPIS+ WPFAQWG+DLIGP P  KGQ K+ +++
Subjt:  -------------------------CDNCPRFANGLQQSSELLTPISSRWPFAQWGLDLIGPLPTAKGQVKYVVVR

XP_022157896.1 uncharacterized protein LOC111024502 [Momordica charantia]1.2e-4154.36Show/hide
Query:  VKVLNEPSIDQPEMMEVQLTQPTWMDPIKNFLSGITPTDTSEARKVRRQATHYIVQDDKLYKRGFSLPLLQCLGPDEASYVIQEVHEGISRNHVGARCDN
        V++L+ PSI  PE+ME+    P+WMDPI  F+ GI+P D++E +K+ R+A  +I++D  LY+RGFSLPLL C+ P E  Y+++E+HEG ++  V   CDN
Subjt:  VKVLNEPSIDQPEMMEVQLTQPTWMDPIKNFLSGITPTDTSEARKVRRQATHYIVQDDKLYKRGFSLPLLQCLGPDEASYVIQEVHEGISRNHVGARCDN

Query:  CPRFANGLQQSSELLTPISSRWPFAQWGLDLIGPLPTAKGQVKYVVVRV
        C RFAN + Q  ELLTPIS  WPFAQWG+D+IGP P  KGQ K+VVV V
Subjt:  CPRFANGLQQSSELLTPISSRWPFAQWGLDLIGPLPTAKGQVKYVVVRV

XP_022158215.1 uncharacterized protein LOC111024751 [Momordica charantia]7.9e-4653.41Show/hide
Query:  VKVLNEPSIDQPEMMEVQLTQPTWMDPIKNFL-SGITPTDTSEARKVRRQATHYIVQDDKLYKRGFSLPLLQCLGPDEASYVIQEVHEGISRNHVGAR--
        V++L E SIDQPE+M++   +PTWMDPIK+FL +G  P D S+ARK+RRQA HY++Q+ KL+KRG+SLPLL+CL P+EA YV++E+HEG+  NH GAR  
Subjt:  VKVLNEPSIDQPEMMEVQLTQPTWMDPIKNFL-SGITPTDTSEARKVRRQATHYIVQDDKLYKRGFSLPLLQCLGPDEASYVIQEVHEGISRNHVGAR--

Query:  ------------------------CDNCPRFANGLQQSSELLTPISSRWPFAQWGLDLIGPLPTAKGQVKYVVVRV
                                CD C RFA+ L+Q  E+LTPISS WPFAQWG+DLI PLP  KGQ+K+ +V V
Subjt:  ------------------------CDNCPRFANGLQQSSELLTPISSRWPFAQWGLDLIGPLPTAKGQVKYVVVRV

TrEMBL top hitse value%identityAlignment
A0A6J1DEB3 uncharacterized protein LOC1110200025.8e-4254.36Show/hide
Query:  VKVLNEPSIDQPEMMEVQLTQPTWMDPIKNFLSGITPTDTSEARKVRRQATHYIVQDDKLYKRGFSLPLLQCLGPDEASYVIQEVHEGISRNHVGARCDN
        V++L+ PSI  PE+ME+    P+WMDPI  F+ GI+P D++E +K+ R+A  +I++D  LY+RGFSLPLL C+ P E  Y+++E+HEG ++  V   CDN
Subjt:  VKVLNEPSIDQPEMMEVQLTQPTWMDPIKNFLSGITPTDTSEARKVRRQATHYIVQDDKLYKRGFSLPLLQCLGPDEASYVIQEVHEGISRNHVGARCDN

Query:  CPRFANGLQQSSELLTPISSRWPFAQWGLDLIGPLPTAKGQVKYVVVRV
        C RFAN + Q  ELLTPIS  WPFAQWG+D+IGP P  KGQ K+VVV V
Subjt:  CPRFANGLQQSSELLTPISSRWPFAQWGLDLIGPLPTAKGQVKYVVVRV

A0A6J1DV78 Ribonuclease H3.8e-4653.41Show/hide
Query:  VKVLNEPSIDQPEMMEVQLTQPTWMDPIKNFL-SGITPTDTSEARKVRRQATHYIVQDDKLYKRGFSLPLLQCLGPDEASYVIQEVHEGISRNHVGAR--
        V++L E SIDQPE+M++   +PTWMDPIK+FL +G  P D S+ARK+RRQA HY++Q+ KL+KRG+SLPLL+CL P+EA YV++E+HEG+  NH GAR  
Subjt:  VKVLNEPSIDQPEMMEVQLTQPTWMDPIKNFL-SGITPTDTSEARKVRRQATHYIVQDDKLYKRGFSLPLLQCLGPDEASYVIQEVHEGISRNHVGAR--

Query:  ------------------------CDNCPRFANGLQQSSELLTPISSRWPFAQWGLDLIGPLPTAKGQVKYVVVRV
                                CD C RFA+ L+Q  E+LTPISS WPFAQWG+DLI PLP  KGQ+K+ +V V
Subjt:  ------------------------CDNCPRFANGLQQSSELLTPISSRWPFAQWGLDLIGPLPTAKGQVKYVVVRV

A0A6J1DWM2 Ribonuclease H1.0e-4653.41Show/hide
Query:  VKVLNEPSIDQPEMMEVQLTQPTWMDPIKNFL-SGITPTDTSEARKVRRQATHYIVQDDKLYKRGFSLPLLQCLGPDEASYVIQEVHEGISRNHVGAR--
        V++L E S+DQPE+ME+   QPTWMDPIK+FL +G  P D S+ARK+RRQA HY++Q+ KL+KRG+SLPLL+CL P+EA YV++E+HEG+  NH GA+  
Subjt:  VKVLNEPSIDQPEMMEVQLTQPTWMDPIKNFL-SGITPTDTSEARKVRRQATHYIVQDDKLYKRGFSLPLLQCLGPDEASYVIQEVHEGISRNHVGAR--

Query:  ------------------------CDNCPRFANGLQQSSELLTPISSRWPFAQWGLDLIGPLPTAKGQVKYVVVRV
                                CD C RFA+ L+Q  E+LT ISS WPFAQWG+DLIGPLP  KGQ+K+ +V V
Subjt:  ------------------------CDNCPRFANGLQQSSELLTPISSRWPFAQWGLDLIGPLPTAKGQVKYVVVRV

A0A6J1DYR5 uncharacterized protein LOC1110242882.2e-4147.73Show/hide
Query:  MLVKVLNEPSIDQPEMMEVQLTQPTWMDPIKNFLSGITPTDTSEARKVRRQATHYIVQDDKLYKRGFSLPLLQCLGPDEASYVIQEVHEGISRNHVGAR-
        +LVK+L+ PSI + +MMEV     +WMDPI+NFL G  P +  EA+K+RR+   Y+++D+ +Y+RGFSLPLL+C+  ++ SYV++EVHEG+  NH+GAR 
Subjt:  MLVKVLNEPSIDQPEMMEVQLTQPTWMDPIKNFLSGITPTDTSEARKVRRQATHYIVQDDKLYKRGFSLPLLQCLGPDEASYVIQEVHEGISRNHVGAR-

Query:  -------------------------CDNCPRFANGLQQSSELLTPISSRWPFAQWGLDLIGPLPTAKGQVKYVVVR
                                 CDNC RFAN + Q  ELLTPIS+ WPFAQWG+DLIGP P  KGQ K+ +++
Subjt:  -------------------------CDNCPRFANGLQQSSELLTPISSRWPFAQWGLDLIGPLPTAKGQVKYVVVR

A0A6J1DZH2 uncharacterized protein LOC1110245025.8e-4254.36Show/hide
Query:  VKVLNEPSIDQPEMMEVQLTQPTWMDPIKNFLSGITPTDTSEARKVRRQATHYIVQDDKLYKRGFSLPLLQCLGPDEASYVIQEVHEGISRNHVGARCDN
        V++L+ PSI  PE+ME+    P+WMDPI  F+ GI+P D++E +K+ R+A  +I++D  LY+RGFSLPLL C+ P E  Y+++E+HEG ++  V   CDN
Subjt:  VKVLNEPSIDQPEMMEVQLTQPTWMDPIKNFLSGITPTDTSEARKVRRQATHYIVQDDKLYKRGFSLPLLQCLGPDEASYVIQEVHEGISRNHVGARCDN

Query:  CPRFANGLQQSSELLTPISSRWPFAQWGLDLIGPLPTAKGQVKYVVVRV
        C RFAN + Q  ELLTPIS  WPFAQWG+D+IGP P  KGQ K+VVV V
Subjt:  CPRFANGLQQSSELLTPISSRWPFAQWGLDLIGPLPTAKGQVKYVVVRV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGTCAAGGTGCTCAACGAACCTTCCATCGATCAACCAGAGATGATGGAAGTTCAGTTAACCCAGCCCACGTGGATGGATCCAATCAAGAATTTTCTAAGTGGCAT
AACTCCGACGGACACGTCCGAGGCCAGGAAAGTCCGCCGTCAGGCAACTCATTACATCGTGCAGGACGATAAGCTGTACAAAAGGGGATTTTCTCTACCACTATTGCAGT
GCCTCGGTCCTGATGAGGCGAGCTACGTCATTCAGGAAGTCCATGAGGGGATTTCCAGAAATCACGTTGGAGCTAGGTGTGACAATTGTCCGCGCTTCGCAAATGGGCTA
CAACAATCTTCGGAGCTGCTGACCCCGATCTCGAGTCGTTGGCCGTTCGCTCAATGGGGGTTAGATCTGATCGGCCCGCTACCGACAGCGAAAGGACAGGTAAAGTATGT
TGTGGTAAGAGTCTCTCCTTTGGTTATTAACACTCACTATGGGTTCCCGGATGTGTTTGATGCAGTAGAGGTGGAGGCTGATGATGAGGTTGTAGTGACACTTAAGAATC
CCAAGACCCATGGTGTGGTTGCTAGAGAACAATACAATGAGTTAAGTCGCAAATATGATCTTGTCTTGGCTACTCAACATGCCACGTGTGAGTTTCTCATGGAGCTTTAT
AGAGATGGTGCACCTTCTCTCCCCGACGAGCTCAAGGCCGACTTGCCTTCTTCTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGGTCAAGGTGCTCAACGAACCTTCCATCGATCAACCAGAGATGATGGAAGTTCAGTTAACCCAGCCCACGTGGATGGATCCAATCAAGAATTTTCTAAGTGGCAT
AACTCCGACGGACACGTCCGAGGCCAGGAAAGTCCGCCGTCAGGCAACTCATTACATCGTGCAGGACGATAAGCTGTACAAAAGGGGATTTTCTCTACCACTATTGCAGT
GCCTCGGTCCTGATGAGGCGAGCTACGTCATTCAGGAAGTCCATGAGGGGATTTCCAGAAATCACGTTGGAGCTAGGTGTGACAATTGTCCGCGCTTCGCAAATGGGCTA
CAACAATCTTCGGAGCTGCTGACCCCGATCTCGAGTCGTTGGCCGTTCGCTCAATGGGGGTTAGATCTGATCGGCCCGCTACCGACAGCGAAAGGACAGGTAAAGTATGT
TGTGGTAAGAGTCTCTCCTTTGGTTATTAACACTCACTATGGGTTCCCGGATGTGTTTGATGCAGTAGAGGTGGAGGCTGATGATGAGGTTGTAGTGACACTTAAGAATC
CCAAGACCCATGGTGTGGTTGCTAGAGAACAATACAATGAGTTAAGTCGCAAATATGATCTTGTCTTGGCTACTCAACATGCCACGTGTGAGTTTCTCATGGAGCTTTAT
AGAGATGGTGCACCTTCTCTCCCCGACGAGCTCAAGGCCGACTTGCCTTCTTCTTCATGA
Protein sequenceShow/hide protein sequence
MLVKVLNEPSIDQPEMMEVQLTQPTWMDPIKNFLSGITPTDTSEARKVRRQATHYIVQDDKLYKRGFSLPLLQCLGPDEASYVIQEVHEGISRNHVGARCDNCPRFANGL
QQSSELLTPISSRWPFAQWGLDLIGPLPTAKGQVKYVVVRVSPLVINTHYGFPDVFDAVEVEADDEVVVTLKNPKTHGVVAREQYNELSRKYDLVLATQHATCEFLMELY
RDGAPSLPDELKADLPSSS