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Moc07g03650 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g03650
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDNA-directed DNA polymerase
Genome locationchr7:3178883..3182160
RNA-Seq ExpressionMoc07g03650
SyntenyMoc07g03650
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143639.1 uncharacterized protein LOC111013500 [Momordica charantia]1.3e-1972.15Show/hide
Query:  MKVNDEQVIINVLDAMRLPDEVEECSTIGAIMEELQQMIVEDLEAYLEAAKKEAKIVPGSSFPQFERFEFLQPTIADLK
        MKVNDEQ+  NVLD  RLPDEVE+CS IGAIMEELQ+MIVEDLEA LEAA+KEA ++     P FE FE  QPTIADLK
Subjt:  MKVNDEQVIINVLDAMRLPDEVEECSTIGAIMEELQQMIVEDLEAYLEAAKKEAKIVPGSSFPQFERFEFLQPTIADLK

XP_030479560.1 uncharacterized protein LOC115696816 [Cannabis sativa]1.9e-1845.83Show/hide
Query:  MKVNDEQVIINVLDAMRLPDEVEECSTIGAI-------------MEELQQMIVEDLEAYLEAAK-KEAKIVPGSSFPQFER-FEFLQPTIADLKAMQPSI
        M+VND+++  NV +AMR PDE+++CS +  I              +E     +EDLEA  E  + + A + P   FP+F+R FE L+   ++ K  +PSI
Subjt:  MKVNDEQVIINVLDAMRLPDEVEECSTIGAI-------------MEELQQMIVEDLEAYLEAAK-KEAKIVPGSSFPQFER-FEFLQPTIADLKAMQPSI

Query:  IEPPKLEKKPLPSHLKYAYLVLNDTLPVIISSYLSNEHEYLLLQ
         EPP+LE KPLPSHLKYAYL  N+TLPVIIS+ L  E E LLL+
Subjt:  IEPPKLEKKPLPSHLKYAYLVLNDTLPVIISSYLSNEHEYLLLQ

XP_030485610.1 uncharacterized protein LOC115702304 [Cannabis sativa]1.6e-1745.83Show/hide
Query:  MKVNDEQVIINVLDAMRLPDEVEECSTIGAI-------------MEELQQMIVEDLEAYLEAAKKE-AKIVPGSSFPQFER-FEFLQPTIADLKAMQPSI
        M+VND++V  NV +AMR  DE+EECS +  I              +E     +EDLEA  E  + + A + P    P+F+R FE L+   ++ K  +PSI
Subjt:  MKVNDEQVIINVLDAMRLPDEVEECSTIGAI-------------MEELQQMIVEDLEAYLEAAKKE-AKIVPGSSFPQFER-FEFLQPTIADLKAMQPSI

Query:  IEPPKLEKKPLPSHLKYAYLVLNDTLPVIISSYLSNEHEYLLLQ
         EPPKLE KPLPSHLKYAYL  N+ LP+IIS+ L  E E LLL+
Subjt:  IEPPKLEKKPLPSHLKYAYLVLNDTLPVIISSYLSNEHEYLLLQ

XP_030502183.1 uncharacterized protein LOC115717351 [Cannabis sativa]1.8e-1645.14Show/hide
Query:  MKVNDEQVIINVLDAMRLPDEVEECSTIGAI-------------MEELQQMIVEDLEAYLEAAKKE-AKIVPGSSFPQFER-FEFLQPTIADLKAMQPSI
        M+VND++V  NV +AMR PDE+EECS I  I              +E      ++LE   E    + A + P    P+F++ FE L+   ++ K  +PS 
Subjt:  MKVNDEQVIINVLDAMRLPDEVEECSTIGAI-------------MEELQQMIVEDLEAYLEAAKKE-AKIVPGSSFPQFER-FEFLQPTIADLKAMQPSI

Query:  IEPPKLEKKPLPSHLKYAYLVLNDTLPVIISSYLSNEHEYLLLQ
         EPPKLE KPLPSHLKYAYL  NDTLPVII+S L  E E  LL+
Subjt:  IEPPKLEKKPLPSHLKYAYLVLNDTLPVIISSYLSNEHEYLLLQ

XP_030504461.1 uncharacterized protein LOC115719521 [Cannabis sativa]4.1e-2147.92Show/hide
Query:  MKVNDEQVIINVLDAMRLPDEVEECSTIGAI-------------MEELQQMIVEDLEAYLEAAKKEAK-IVPGSSFPQFER-FEFLQPTIADLKAMQPSI
        M+VND++V  NV +AMR PDE+EECS +  I              +E     +EDLEA  E  + +   + P   FP+F+R FE L+   ++ K ++PSI
Subjt:  MKVNDEQVIINVLDAMRLPDEVEECSTIGAI-------------MEELQQMIVEDLEAYLEAAKKEAK-IVPGSSFPQFER-FEFLQPTIADLKAMQPSI

Query:  IEPPKLEKKPLPSHLKYAYLVLNDTLPVIISSYLSNEHEYLLLQ
         EPPKLE KPLPSHLKYAYL  N+TLPVIIS++L  E E LLL+
Subjt:  IEPPKLEKKPLPSHLKYAYLVLNDTLPVIISSYLSNEHEYLLLQ

TrEMBL top hitse value%identityAlignment
A0A2G9HW58 DNA-directed DNA polymerase5.7e-1339.55Show/hide
Query:  MKVNDEQVIINVLDAMRLPDEVEEC-------------STIGAIMEELQQMIVEDLEAYLEAAKKEAKIVPGSSFPQFERFEFLQPTIADLKAMQPSIIE
        M+V D+Q+I NV +AM+ P+E +EC             S +   ++ L++ +++ L+   +   +  K +  S + +  R E L+ T    K ++PSI E
Subjt:  MKVNDEQVIINVLDAMRLPDEVEEC-------------STIGAIMEELQQMIVEDLEAYLEAAKKEAKIVPGSSFPQFERFEFLQPTIADLKAMQPSIIE

Query:  PPKLEKKPLPSHLKYAYLVLNDTLPVIISSYLSN
        PP LE KPLPSHL YAYL  +DTLPVIISS LS+
Subjt:  PPKLEKKPLPSHLKYAYLVLNDTLPVIISSYLSN

A0A2G9HYA0 Reverse transcriptase1.7e-1238.81Show/hide
Query:  MKVNDEQVIINVLDAMRLPDEVEECSTIGAI-------------MEELQQMIVEDLEAYLEAAKKEAKIVPGSSFPQFERFEFLQPTIADLKAMQPSIIE
        M+V D+Q+  NV  AM+ P+E +EC  +                ++ L++ +++ L+   E   +  K +  S F +  R E L+ T    K ++PSI +
Subjt:  MKVNDEQVIINVLDAMRLPDEVEECSTIGAI-------------MEELQQMIVEDLEAYLEAAKKEAKIVPGSSFPQFERFEFLQPTIADLKAMQPSIIE

Query:  PPKLEKKPLPSHLKYAYLVLNDTLPVIISSYLSN
        PP LE KPLPSHL YAYL  +DTLPVIISS LS+
Subjt:  PPKLEKKPLPSHLKYAYLVLNDTLPVIISSYLSN

A0A2G9IA86 DNA-directed DNA polymerase5.7e-1340.77Show/hide
Query:  MKVNDEQVIINVLDAMRLPDEVEECSTIG---------AIMEELQQMIVEDLEAYLEAAKKEAKIVPGSSFPQFERFEFLQPTIADLKAMQPSIIEPPKL
        M+V D+Q+  NV  AM+ P+E +EC T+          +I + L++ +++ L+   E  ++  K + GS + +    E L+ T A  K ++PSI E P L
Subjt:  MKVNDEQVIINVLDAMRLPDEVEECSTIG---------AIMEELQQMIVEDLEAYLEAAKKEAKIVPGSSFPQFERFEFLQPTIADLKAMQPSIIEPPKL

Query:  EKKPLPSHLKYAYLVLNDTLPVIISSYLSN
        E KPLPSHL Y YL  +DTLPVIISS LS+
Subjt:  EKKPLPSHLKYAYLVLNDTLPVIISSYLSN

A0A6J1CPX1 uncharacterized protein LOC1110135006.3e-2072.15Show/hide
Query:  MKVNDEQVIINVLDAMRLPDEVEECSTIGAIMEELQQMIVEDLEAYLEAAKKEAKIVPGSSFPQFERFEFLQPTIADLK
        MKVNDEQ+  NVLD  RLPDEVE+CS IGAIMEELQ+MIVEDLEA LEAA+KEA ++     P FE FE  QPTIADLK
Subjt:  MKVNDEQVIINVLDAMRLPDEVEECSTIGAIMEELQQMIVEDLEAYLEAAKKEAKIVPGSSFPQFERFEFLQPTIADLK

A0A6J1DBX0 uncharacterized protein LOC1110189013.2e-1674.29Show/hide
Query:  MKVNDEQVIINVLDAMRLPDEVEECSTIGAIMEELQQMIVEDLEAYLEAAKKEAKIVPGSSFPQFERFEF
        MKVNDEQV  NVLDAMRLPD+VEECSTIGAIMEELQQMIVEDLEA LE A+KE+  +     PQFE   F
Subjt:  MKVNDEQVIINVLDAMRLPDEVEECSTIGAIMEELQQMIVEDLEAYLEAAKKEAKIVPGSSFPQFERFEF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTCAATGATGAACAGGTAATCATCAATGTCCTTGATGCGATGCGTCTACCGGATGAAGTTGAGGAGTGCTCTACAATAGGGGCAATCATGGAGGAACTCCAGCA
AATGATAGTGGAAGACTTAGAAGCATATTTGGAGGCCGCAAAAAAAGAAGCAAAAATTGTGCCTGGCTCAAGTTTCCCACAATTTGAGCGTTTTGAGTTTTTGCAGCCAA
CTATAGCGGATTTGAAAGCCATGCAACCTTCCATCATTGAACCTCCAAAACTGGAGAAGAAACCCCTACCTTCTCATTTGAAATATGCTTATTTGGTTTTAAACGATACT
TTGCCAGTTATCATTTCTTCATATTTGTCTAATGAACATGAATATTTGCTTTTGCAGGATCAAGATTTGACCCACGTCAAAATTGCGCCAGACGCAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTCAATGATGAACAGGTAATCATCAATGTCCTTGATGCGATGCGTCTACCGGATGAAGTTGAGGAGTGCTCTACAATAGGGGCAATCATGGAGGAACTCCAGCA
AATGATAGTGGAAGACTTAGAAGCATATTTGGAGGCCGCAAAAAAAGAAGCAAAAATTGTGCCTGGCTCAAGTTTCCCACAATTTGAGCGTTTTGAGTTTTTGCAGCCAA
CTATAGCGGATTTGAAAGCCATGCAACCTTCCATCATTGAACCTCCAAAACTGGAGAAGAAACCCCTACCTTCTCATTTGAAATATGCTTATTTGGTTTTAAACGATACT
TTGCCAGTTATCATTTCTTCATATTTGTCTAATGAACATGAATATTTGCTTTTGCAGGATCAAGATTTGACCCACGTCAAAATTGCGCCAGACGCAATTTAA
Protein sequenceShow/hide protein sequence
MKVNDEQVIINVLDAMRLPDEVEECSTIGAIMEELQQMIVEDLEAYLEAAKKEAKIVPGSSFPQFERFEFLQPTIADLKAMQPSIIEPPKLEKKPLPSHLKYAYLVLNDT
LPVIISSYLSNEHEYLLLQDQDLTHVKIAPDAI