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Moc07g04030 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g04030
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr7:3495569..3502275
RNA-Seq ExpressionMoc07g04030
SyntenyMoc07g04030
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0043531 - ADP binding (molecular function)
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034014.1 uncharacterized protein E6C27_scaffold400G00820 [Cucumis melo var. makuwa]1.7e-3343.98Show/hide
Query:  NVSTRANALTLSLNQLSPSDNVDEDIDLPVENSFVELRTAIDDEFDQLDFEGHEYNIPSGMFNDLGIDTMNSTTEYDLIVGPLAVEHDLSYKGFRCKDKQ
        NV  R     + +   S +  V  + ++   N + E RT  DDEF+++DF+G EY +PS  F DL ++ +++  E+D I+ P+  ++   Y G  C++K+
Subjt:  NVSTRANALTLSLNQLSPSDNVDEDIDLPVENSFVELRTAIDDEFDQLDFEGHEYNIPSGMFNDLGIDTMNSTTEYDLIVGPLAVEHDLSYKGFRCKDKQ

Query:  TIQHIVKRFAVKSHHPYEVVESIPSKWVIRCKKWEDGCKWQLRAILNKRYNLWEITKYQDLIMSFY
         +QH+VK FA+KSH PYEVVES P+KWVIRCKK  +GCKW+LRAI+ K + L+EITK  D    FY
Subjt:  TIQHIVKRFAVKSHHPYEVVESIPSKWVIRCKKWEDGCKWQLRAILNKRYNLWEITKYQDLIMSFY

TYK27427.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.0e-3350.37Show/hide
Query:  NSFVELRTAIDDEFDQLDFEGHEYNIPSGMFNDLGIDTMNSTTEYDLIVGPLAVEHDLSYKGFRCKDKQTIQHIVKRFAVKSHHPYEVVESIPSKWVIRC
        N + E RT  DDEF+++DF+G EY +PS  F DL ++ ++   E+D I+ P+  ++   Y G  C++K+ +QH+VK FA+KSH PYEVVES P+KWVIRC
Subjt:  NSFVELRTAIDDEFDQLDFEGHEYNIPSGMFNDLGIDTMNSTTEYDLIVGPLAVEHDLSYKGFRCKDKQTIQHIVKRFAVKSHHPYEVVESIPSKWVIRC

Query:  KKWEDGCKWQLRAILNKRYNLWEITKYQDLIMSFY
        KK  +GCKW+LRAI+ K + L+EITK  D    FY
Subjt:  KKWEDGCKWQLRAILNKRYNLWEITKYQDLIMSFY

XP_008456454.1 PREDICTED: uncharacterized protein LOC103496397 [Cucumis melo]1.3e-3343.98Show/hide
Query:  NVSTRANALTLSLNQLSPSDNVDEDIDLPVENSFVELRTAIDDEFDQLDFEGHEYNIPSGMFNDLGIDTMNSTTEYDLIVGPLAVEHDLSYKGFRCKDKQ
        NV  R     + ++  S +  V  + ++   N + E RT  DDEF+++DF+G EY +PS  F +L +D ++   E+D I+ P+ +++   Y G  C++K+
Subjt:  NVSTRANALTLSLNQLSPSDNVDEDIDLPVENSFVELRTAIDDEFDQLDFEGHEYNIPSGMFNDLGIDTMNSTTEYDLIVGPLAVEHDLSYKGFRCKDKQ

Query:  TIQHIVKRFAVKSHHPYEVVESIPSKWVIRCKKWEDGCKWQLRAILNKRYNLWEITKYQDLIMSFY
         +QH+VK FA+KSH PYEVVES P+KWVIRCKK   GCKW+LRAI+ K + L+EITK  D    FY
Subjt:  TIQHIVKRFAVKSHHPYEVVESIPSKWVIRCKKWEDGCKWQLRAILNKRYNLWEITKYQDLIMSFY

XP_022143566.1 uncharacterized protein LOC111013435 [Momordica charantia]6.8e-4656.29Show/hide
Query:  PSDNVDEDIDLPVENSFVELRTAIDDEFDQLDFEGHEYNIPSGMFNDLGIDTMNSTTEYDLIVGPLAVEHDLSYKGFRCKDKQTIQHIVKRFAVKSHHPY
        P  ++DED+DL  ++ F+ELRT  DDEFD+LD EG E++IPS  FND+  D +N   E+D I+ PL  E+D+ YK F C DK+T+QHIVK FA++SHHPY
Subjt:  PSDNVDEDIDLPVENSFVELRTAIDDEFDQLDFEGHEYNIPSGMFNDLGIDTMNSTTEYDLIVGPLAVEHDLSYKGFRCKDKQTIQHIVKRFAVKSHHPY

Query:  EVVESIPSKWVIRCKKWEDGCKWQLRAILNKRYNLWEITKYQDLIMSFYVPSFGHSVVVLEHFKKGH
        ++VES PSKWVIRCKKW+DGCKW+LRAILNK Y++WE  KY D           HS V  E F K H
Subjt:  EVVESIPSKWVIRCKKWEDGCKWQLRAILNKRYNLWEITKYQDLIMSFYVPSFGHSVVVLEHFKKGH

XP_022156564.1 uncharacterized protein LOC111023439 [Momordica charantia]3.1e-4649.75Show/hide
Query:  PSDNVDEDIDLPVENSFVELRTAIDDEFDQLDFEGHEYNIPSGMFNDLGIDTMNSTTEYDLIVGPLAVEHDLSYKGFRCKDKQTIQHIVKRFAVKSHHPY
        P  N+DED+DL  +N F++L+T IDDEFD+LD EG E++I S  FND+    +N+  E+D I  P+A ++++ YKGFRC DK+T+QHIVK F V +HH Y
Subjt:  PSDNVDEDIDLPVENSFVELRTAIDDEFDQLDFEGHEYNIPSGMFNDLGIDTMNSTTEYDLIVGPLAVEHDLSYKGFRCKDKQTIQHIVKRFAVKSHHPY

Query:  EVVESIPSKWVIRCKKWEDGCKWQLRAILNKRYNLWEITKYQDLIMSFYVPSFGHSVVVLEHFKKGHSLVAGRTNINDHLVPPPRNNDPADVANKEE
        EV+ES+PSKWVIRCKKW+DGCKW+LRAILNK Y++WEITKY D           HS V  E F + HS +     I+  L    R+N    ++  ++
Subjt:  EVVESIPSKWVIRCKKWEDGCKWQLRAILNKRYNLWEITKYQDLIMSFYVPSFGHSVVVLEHFKKGHSLVAGRTNINDHLVPPPRNNDPADVANKEE

TrEMBL top hitse value%identityAlignment
A0A1S3C4J7 uncharacterized protein LOC1034963976.5e-3443.98Show/hide
Query:  NVSTRANALTLSLNQLSPSDNVDEDIDLPVENSFVELRTAIDDEFDQLDFEGHEYNIPSGMFNDLGIDTMNSTTEYDLIVGPLAVEHDLSYKGFRCKDKQ
        NV  R     + ++  S +  V  + ++   N + E RT  DDEF+++DF+G EY +PS  F +L +D ++   E+D I+ P+ +++   Y G  C++K+
Subjt:  NVSTRANALTLSLNQLSPSDNVDEDIDLPVENSFVELRTAIDDEFDQLDFEGHEYNIPSGMFNDLGIDTMNSTTEYDLIVGPLAVEHDLSYKGFRCKDKQ

Query:  TIQHIVKRFAVKSHHPYEVVESIPSKWVIRCKKWEDGCKWQLRAILNKRYNLWEITKYQDLIMSFY
         +QH+VK FA+KSH PYEVVES P+KWVIRCKK   GCKW+LRAI+ K + L+EITK  D    FY
Subjt:  TIQHIVKRFAVKSHHPYEVVESIPSKWVIRCKKWEDGCKWQLRAILNKRYNLWEITKYQDLIMSFY

A0A5A7SS31 DBD_Tnp_Mut domain-containing protein8.5e-3443.98Show/hide
Query:  NVSTRANALTLSLNQLSPSDNVDEDIDLPVENSFVELRTAIDDEFDQLDFEGHEYNIPSGMFNDLGIDTMNSTTEYDLIVGPLAVEHDLSYKGFRCKDKQ
        NV  R     + +   S +  V  + ++   N + E RT  DDEF+++DF+G EY +PS  F DL ++ +++  E+D I+ P+  ++   Y G  C++K+
Subjt:  NVSTRANALTLSLNQLSPSDNVDEDIDLPVENSFVELRTAIDDEFDQLDFEGHEYNIPSGMFNDLGIDTMNSTTEYDLIVGPLAVEHDLSYKGFRCKDKQ

Query:  TIQHIVKRFAVKSHHPYEVVESIPSKWVIRCKKWEDGCKWQLRAILNKRYNLWEITKYQDLIMSFY
         +QH+VK FA+KSH PYEVVES P+KWVIRCKK  +GCKW+LRAI+ K + L+EITK  D    FY
Subjt:  TIQHIVKRFAVKSHHPYEVVESIPSKWVIRCKKWEDGCKWQLRAILNKRYNLWEITKYQDLIMSFY

A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X15.0e-3450.37Show/hide
Query:  NSFVELRTAIDDEFDQLDFEGHEYNIPSGMFNDLGIDTMNSTTEYDLIVGPLAVEHDLSYKGFRCKDKQTIQHIVKRFAVKSHHPYEVVESIPSKWVIRC
        N + E RT  DDEF+++DF+G EY +PS  F DL ++ ++   E+D I+ P+  ++   Y G  C++K+ +QH+VK FA+KSH PYEVVES P+KWVIRC
Subjt:  NSFVELRTAIDDEFDQLDFEGHEYNIPSGMFNDLGIDTMNSTTEYDLIVGPLAVEHDLSYKGFRCKDKQTIQHIVKRFAVKSHHPYEVVESIPSKWVIRC

Query:  KKWEDGCKWQLRAILNKRYNLWEITKYQDLIMSFY
        KK  +GCKW+LRAI+ K + L+EITK  D    FY
Subjt:  KKWEDGCKWQLRAILNKRYNLWEITKYQDLIMSFY

A0A6J1CQN0 uncharacterized protein LOC1110134353.3e-4656.29Show/hide
Query:  PSDNVDEDIDLPVENSFVELRTAIDDEFDQLDFEGHEYNIPSGMFNDLGIDTMNSTTEYDLIVGPLAVEHDLSYKGFRCKDKQTIQHIVKRFAVKSHHPY
        P  ++DED+DL  ++ F+ELRT  DDEFD+LD EG E++IPS  FND+  D +N   E+D I+ PL  E+D+ YK F C DK+T+QHIVK FA++SHHPY
Subjt:  PSDNVDEDIDLPVENSFVELRTAIDDEFDQLDFEGHEYNIPSGMFNDLGIDTMNSTTEYDLIVGPLAVEHDLSYKGFRCKDKQTIQHIVKRFAVKSHHPY

Query:  EVVESIPSKWVIRCKKWEDGCKWQLRAILNKRYNLWEITKYQDLIMSFYVPSFGHSVVVLEHFKKGH
        ++VES PSKWVIRCKKW+DGCKW+LRAILNK Y++WE  KY D           HS V  E F K H
Subjt:  EVVESIPSKWVIRCKKWEDGCKWQLRAILNKRYNLWEITKYQDLIMSFYVPSFGHSVVVLEHFKKGH

A0A6J1DTV0 uncharacterized protein LOC1110234391.5e-4649.75Show/hide
Query:  PSDNVDEDIDLPVENSFVELRTAIDDEFDQLDFEGHEYNIPSGMFNDLGIDTMNSTTEYDLIVGPLAVEHDLSYKGFRCKDKQTIQHIVKRFAVKSHHPY
        P  N+DED+DL  +N F++L+T IDDEFD+LD EG E++I S  FND+    +N+  E+D I  P+A ++++ YKGFRC DK+T+QHIVK F V +HH Y
Subjt:  PSDNVDEDIDLPVENSFVELRTAIDDEFDQLDFEGHEYNIPSGMFNDLGIDTMNSTTEYDLIVGPLAVEHDLSYKGFRCKDKQTIQHIVKRFAVKSHHPY

Query:  EVVESIPSKWVIRCKKWEDGCKWQLRAILNKRYNLWEITKYQDLIMSFYVPSFGHSVVVLEHFKKGHSLVAGRTNINDHLVPPPRNNDPADVANKEE
        EV+ES+PSKWVIRCKKW+DGCKW+LRAILNK Y++WEITKY D           HS V  E F + HS +     I+  L    R+N    ++  ++
Subjt:  EVVESIPSKWVIRCKKWEDGCKWQLRAILNKRYNLWEITKYQDLIMSFYVPSFGHSVVVLEHFKKGHSLVAGRTNINDHLVPPPRNNDPADVANKEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACACCTATCCAATGTCTCAACGAGAGCCAATGCCTTGACCCTGAGCCTGAACCAATTGTCCCCAAGTGATAATGTGGACGAGGATATAGACTTACCTGTT
GAAAATAGTTTTGTAGAATTGAGAACTGCAATAGATGATGAGTTTGATCAATTGGATTTCGAGGGTCATGAATATAATATCCCTTCAGGCATGTTCAACGACTTG
GGAATAGACACCATGAATAGTACTACAGAATATGATCTGATCGTTGGACCATTGGCTGTAGAACATGATTTGTCGTACAAGGGGTTCAGATGCAAAGATAAACAA
ACAATACAACATATTGTGAAACGGTTTGCAGTTAAAAGTCACCACCCATATGAAGTTGTAGAGTCGATACCATCAAAGTGGGTAATTAGATGCAAGAAGTGGGAA
GATGGATGCAAATGGCAACTCCGTGCAATTCTAAACAAACGTTATAACCTTTGGGAAATCACAAAGTACCAAGATCTAATCATGTCATTCTACGTTCCGTCTTTT
GGTCATTCGGTCGTTGTATTGGAGCATTTCAAAAAGGGCCACTCTTTAGTTGCTGGACGAACTAATATTAATGATCACCTGGTTCCTCCACCTCGAAACAATGAC
CCTGCTGATGTTGCCAACAAGGAGGAGCGCACTTTAATGTTCGGATTCGATGACGTGGTGAAAACGTGGCAGTCCAGAATCAACAAGTTTGGTGGGTGCAAGGAG
GAGAACTGGAGGACCAAAATCCACGCATCAACAATTGGCGCCGTCTGTGGGGACGATTTAAAGCACCAGTTGAGCAACATGACACCAGAAAGGAGTCCACGACGC
TCTGATGATAACTGCTCCGCCAAGAGGAGGCTGAAATTGGACGGCCCCCAGGTTGGAAGACCCGAGGATGGGACCAGCCAGTCAAACCCGGAACGTCAGGAGGGG
TTTCCCGAGGCGCACGCACTAACGATCCCTGAGCCACTCCAAAAGCAGTTCGCGGTCTTGGAAGACAAGGTAGGGGGCATGCTGCAACGCATGACCCAAGTCCTT
CGATAA
mRNA sequenceShow/hide mRNA sequence
ATGACACACCTATCCAATGTCTCAACGAGAGCCAATGCCTTGACCCTGAGCCTGAACCAATTGTCCCCAAGTGATAATGTGGACGAGGATATAGACTTACCTGTT
GAAAATAGTTTTGTAGAATTGAGAACTGCAATAGATGATGAGTTTGATCAATTGGATTTCGAGGGTCATGAATATAATATCCCTTCAGGCATGTTCAACGACTTG
GGAATAGACACCATGAATAGTACTACAGAATATGATCTGATCGTTGGACCATTGGCTGTAGAACATGATTTGTCGTACAAGGGGTTCAGATGCAAAGATAAACAA
ACAATACAACATATTGTGAAACGGTTTGCAGTTAAAAGTCACCACCCATATGAAGTTGTAGAGTCGATACCATCAAAGTGGGTAATTAGATGCAAGAAGTGGGAA
GATGGATGCAAATGGCAACTCCGTGCAATTCTAAACAAACGTTATAACCTTTGGGAAATCACAAAGTACCAAGATCTAATCATGTCATTCTACGTTCCGTCTTTT
GGTCATTCGGTCGTTGTATTGGAGCATTTCAAAAAGGGCCACTCTTTAGTTGCTGGACGAACTAATATTAATGATCACCTGGTTCCTCCACCTCGAAACAATGAC
CCTGCTGATGTTGCCAACAAGGAGGAGCGCACTTTAATGTTCGGATTCGATGACGTGGTGAAAACGTGGCAGTCCAGAATCAACAAGTTTGGTGGGTGCAAGGAG
GAGAACTGGAGGACCAAAATCCACGCATCAACAATTGGCGCCGTCTGTGGGGACGATTTAAAGCACCAGTTGAGCAACATGACACCAGAAAGGAGTCCACGACGC
TCTGATGATAACTGCTCCGCCAAGAGGAGGCTGAAATTGGACGGCCCCCAGGTTGGAAGACCCGAGGATGGGACCAGCCAGTCAAACCCGGAACGTCAGGAGGGG
TTTCCCGAGGCGCACGCACTAACGATCCCTGAGCCACTCCAAAAGCAGTTCGCGGTCTTGGAAGACAAGGTAGGGGGCATGCTGCAACGCATGACCCAAGTCCTT
CGATAA
Protein sequenceShow/hide protein sequence
MTHLSNVSTRANALTLSLNQLSPSDNVDEDIDLPVENSFVELRTAIDDEFDQLDFEGHEYNIPSGMFNDLGIDTMNSTTEYDLIVGPLAVEHDLSYKGFRCKDKQ
TIQHIVKRFAVKSHHPYEVVESIPSKWVIRCKKWEDGCKWQLRAILNKRYNLWEITKYQDLIMSFYVPSFGHSVVVLEHFKKGHSLVAGRTNINDHLVPPPRNND
PADVANKEERTLMFGFDDVVKTWQSRINKFGGCKEENWRTKIHASTIGAVCGDDLKHQLSNMTPERSPRRSDDNCSAKRRLKLDGPQVGRPEDGTSQSNPERQEG
FPEAHALTIPEPLQKQFAVLEDKVGGMLQRMTQVLR