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Moc07g04060 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g04060
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionrRNA N-glycosidase
Genome locationchr7:3515923..3517588
RNA-Seq ExpressionMoc07g04060
SyntenyMoc07g04060
Gene Ontology termsGO:0017148 - negative regulation of translation (biological process)
GO:0030598 - rRNA N-glycosylase activity (molecular function)
InterPro domainsIPR036041 - Ribosome-inactivating protein superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAG12408.1 karasurin-H precursor [Trichosanthes kirilowii var. japonica]5.9e-1035.29Show/hide
Query:  MRLLPFYFVFALYLGARVAEADVSFSMLGSTNETYKQFIKNLR---------------------------------------------------------
        M+L+ FY V ALY+GA+V EADV+FS+LGST+ TYKQFI+NLR                                                         
Subjt:  MRLLPFYFVFALYLGARVAEADVSFSMLGSTNETYKQFIKNLR---------------------------------------------------------

Query:  ----WDHKSSEADKVLFQGIELLKLSYKDNYDGLETTT-KISRENIDPGFLKL
             +  S+EA+ VLF+GI  ++L Y  NYDGLET   +ISRE I  GF ++
Subjt:  ----WDHKSSEADKVLFQGIELLKLSYKDNYDGLETTT-KISRENIDPGFLKL

P98184.1 RecName: Full=Ribosome-inactivating protein bryodin II; AltName: Full=BD2; AltName: Full=rRNA N-glycosidase; Flags: Precursor [Bryonia dioica]6.1e-0733.12Show/hide
Query:  MRLLPFYFVFALYLGARVAE-ADVSFSMLGSTNETYKQFIKNLR----------WD--------------------------------------------
        MR + FY V ALY+GA V E  D++FS++G+T  TYK FI+NLR          +D                                            
Subjt:  MRLLPFYFVFALYLGARVAE-ADVSFSMLGSTNETYKQFIKNLR----------WD--------------------------------------------

Query:  -------HKSSEADKVLFQGIELLKLSYKDNYDGLETTT-KISRENIDPGFLKL
                 S+EA+ VLF GI  ++L Y  NYDGLET   +ISRENI+ GF ++
Subjt:  -------HKSSEADKVLFQGIELLKLSYKDNYDGLETTT-KISRENIDPGFLKL

XP_022158192.1 ribosome-inactivating protein bryodin II-like [Momordica charantia]1.5e-1339.22Show/hide
Query:  MRLLPFYFVFALYLGARVAEADVSFSMLGSTNETYKQFIKNLR---------------------------------------------------------
        MR LPFYFV AL  GA  AEADVSFSMLG+T+ETY+QFI+NLR                                                         
Subjt:  MRLLPFYFVFALYLGARVAEADVSFSMLGSTNETYKQFIKNLR---------------------------------------------------------

Query:  ----WDHKSSEADKVLFQGIELLKLSYKDNYDGLETTT-KISRENIDPGFLKL
             +  S+EA+ VLF+GI+ ++L YK NYDGLET   KISRE ID GF ++
Subjt:  ----WDHKSSEADKVLFQGIELLKLSYKDNYDGLETTT-KISRENIDPGFLKL

XP_022158193.1 ribosome-inactivating protein bryodin II-like [Momordica charantia]6.2e-2045.39Show/hide
Query:  MRLLPFYFVFALYLGARVAEADVSFSMLGSTNETYKQFIKNLR---------------------------------------------------------
        MRLLPFYF  ALYLGAR AEADVSFSMLGST+ETYKQFIKN+R                                                         
Subjt:  MRLLPFYFVFALYLGARVAEADVSFSMLGSTNETYKQFIKNLR---------------------------------------------------------

Query:  ----WDHKSSEADKVLFQGIELLKLSYKDNYDGLETTTKISRENIDPGFLKL
             +  S+EAD+VLFQGI  +KLSYK NYDGLET  KISRE ID GF ++
Subjt:  ----WDHKSSEADKVLFQGIELLKLSYKDNYDGLETTTKISRENIDPGFLKL

TrEMBL top hitse value%identityAlignment
A0A6J1DVE7 rRNA N-glycosidase3.0e-2045.39Show/hide
Query:  MRLLPFYFVFALYLGARVAEADVSFSMLGSTNETYKQFIKNLR---------------------------------------------------------
        MRLLPFYF  ALYLGAR AEADVSFSMLGST+ETYKQFIKN+R                                                         
Subjt:  MRLLPFYFVFALYLGARVAEADVSFSMLGSTNETYKQFIKNLR---------------------------------------------------------

Query:  ----WDHKSSEADKVLFQGIELLKLSYKDNYDGLETTTKISRENIDPGFLKL
             +  S+EAD+VLFQGI  +KLSYK NYDGLET  KISRE ID GF ++
Subjt:  ----WDHKSSEADKVLFQGIELLKLSYKDNYDGLETTTKISRENIDPGFLKL

A0A6J1DWK4 rRNA N-glycosidase7.2e-1439.22Show/hide
Query:  MRLLPFYFVFALYLGARVAEADVSFSMLGSTNETYKQFIKNLR---------------------------------------------------------
        MR LPFYFV AL  GA  AEADVSFSMLG+T+ETY+QFI+NLR                                                         
Subjt:  MRLLPFYFVFALYLGARVAEADVSFSMLGSTNETYKQFIKNLR---------------------------------------------------------

Query:  ----WDHKSSEADKVLFQGIELLKLSYKDNYDGLETTT-KISRENIDPGFLKL
             +  S+EA+ VLF+GI+ ++L YK NYDGLET   KISRE ID GF ++
Subjt:  ----WDHKSSEADKVLFQGIELLKLSYKDNYDGLETTT-KISRENIDPGFLKL

B1B626 rRNA N-glycosidase2.8e-1035.29Show/hide
Query:  MRLLPFYFVFALYLGARVAEADVSFSMLGSTNETYKQFIKNLR---------------------------------------------------------
        M+L+ FY V ALY+GA+V EADV+FS+LGST+ TYKQFI+NLR                                                         
Subjt:  MRLLPFYFVFALYLGARVAEADVSFSMLGSTNETYKQFIKNLR---------------------------------------------------------

Query:  ----WDHKSSEADKVLFQGIELLKLSYKDNYDGLETTT-KISRENIDPGFLKL
             +  S+EA+ VLF+GI  ++L Y  NYDGLET   +ISRE I  GF ++
Subjt:  ----WDHKSSEADKVLFQGIELLKLSYKDNYDGLETTT-KISRENIDPGFLKL

SwissProt top hitse value%identityAlignment
P98184 Ribosome-inactivating protein bryodin II7.9e-1033.12Show/hide
Query:  MRLLPFYFVFALYLGARVAE-ADVSFSMLGSTNETYKQFIKNLR----------WD--------------------------------------------
        MR + FY V ALY+GA V E  D++FS++G+T  TYK FI+NLR          +D                                            
Subjt:  MRLLPFYFVFALYLGARVAE-ADVSFSMLGSTNETYKQFIKNLR----------WD--------------------------------------------

Query:  -------HKSSEADKVLFQGIELLKLSYKDNYDGLETTT-KISRENIDPGFLKL
                 S+EA+ VLF GI  ++L Y  NYDGLET   +ISRENI+ GF ++
Subjt:  -------HKSSEADKVLFQGIELLKLSYKDNYDGLETTT-KISRENIDPGFLKL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATTGCTACCATTTTACTTTGTTTTTGCTCTCTATCTCGGGGCTCGTGTTGCCGAGGCTGATGTCTCTTTCTCTATGTTGGGCTCCACCAACGAAACCTATAAACA
ATTCATAAAGAACCTGCGGTGGGATCACAAATCGTCTGAAGCAGACAAAGTGTTATTTCAAGGCATCGAGCTCCTGAAACTTTCCTATAAAGACAACTACGATGGTCTTG
AGACAACAACGAAGATTTCAAGAGAGAATATTGATCCTGGGTTTCTTAAATTAGTAGTTCTATCGACAACATGTTCTATCATAACGCTGGTACTTCTGTCCCTCGAGCAT
TCATTGTTATCATCCAACCAGTCTCGGAAGTTGCAAGATTTAAGTACATTGAGCAGAGGGTTTATGAGGGGGATTCGAACTCACAACCTCTTGGTTGAAGAGGACGAGAT
GACCTTCAAGAACATTTGTAGGTGCTTACCTCAAACTGAAATTCAGATAACATGCAATGATTCACGGTACTGTCGGAAGGTTATCGTAACGGAACAAGAGGCTCTGTCTG
AAGGTCCCTTCGTTCGTCGGTCACATCAGTCAAAGCTTTGCGATCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGATTGCTACCATTTTACTTTGTTTTTGCTCTCTATCTCGGGGCTCGTGTTGCCGAGGCTGATGTCTCTTTCTCTATGTTGGGCTCCACCAACGAAACCTATAAACA
ATTCATAAAGAACCTGCGGTGGGATCACAAATCGTCTGAAGCAGACAAAGTGTTATTTCAAGGCATCGAGCTCCTGAAACTTTCCTATAAAGACAACTACGATGGTCTTG
AGACAACAACGAAGATTTCAAGAGAGAATATTGATCCTGGGTTTCTTAAATTAGTAGTTCTATCGACAACATGTTCTATCATAACGCTGGTACTTCTGTCCCTCGAGCAT
TCATTGTTATCATCCAACCAGTCTCGGAAGTTGCAAGATTTAAGTACATTGAGCAGAGGGTTTATGAGGGGGATTCGAACTCACAACCTCTTGGTTGAAGAGGACGAGAT
GACCTTCAAGAACATTTGTAGGTGCTTACCTCAAACTGAAATTCAGATAACATGCAATGATTCACGGTACTGTCGGAAGGTTATCGTAACGGAACAAGAGGCTCTGTCTG
AAGGTCCCTTCGTTCGTCGGTCACATCAGTCAAAGCTTTGCGATCCCTAG
Protein sequenceShow/hide protein sequence
MRLLPFYFVFALYLGARVAEADVSFSMLGSTNETYKQFIKNLRWDHKSSEADKVLFQGIELLKLSYKDNYDGLETTTKISRENIDPGFLKLVVLSTTCSIITLVLLSLEH
SLLSSNQSRKLQDLSTLSRGFMRGIRTHNLLVEEDEMTFKNICRCLPQTEIQITCNDSRYCRKVIVTEQEALSEGPFVRRSHQSKLCDP