; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc07g04150 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g04150
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr7:3590482..3591741
RNA-Seq ExpressionMoc07g04150
SyntenyMoc07g04150
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056771.1 putative mitochondrial protein [Cucumis melo var. makuwa]4.4e-2445.4Show/hide
Query:  RVSSILRAHSFSGHVDGSSPSPEQFVRSATSTITTKVNTAFLQWSSRDQGLITLINATLSPSALAHIV---------------------------DDEEI
        +VSSIL+AHS  GH+D + P P + + S+T    +++N  +LQW SRDQ LITLINATLS SAL H+V                            DEEI
Subjt:  RVSSILRAHSFSGHVDGSSPSPEQFVRSATSTITTKVNTAFLQWSSRDQGLITLINATLSPSALAHIV---------------------------DDEEI

Query:  LVHILNGLTSNFNAFRTSIRTRNDTISVNELSVLLEAEEKTLAAHSSSTDPVPTAMVSIKGAQ
        LVH LNGL++ FNAF TSIRTR+  IS+ EL  LL  EE T+   +S+ + +PTAM +    Q
Subjt:  LVHILNGLTSNFNAFRTSIRTRNDTISVNELSVLLEAEEKTLAAHSSSTDPVPTAMVSIKGAQ

KAA0057164.1 beta-glucosidase 18-like [Cucumis melo var. makuwa]2.4e-2239.68Show/hide
Query:  VSSILRAHSFSGHVDGSSPSPEQFVRSATSTITTKVNTAFLQWSSRDQGLITLINATLSPSALAHIV---------------------------------
        VSSIL+AHS  GH+D + P P + + S+T    +++N  +LQW SRDQ LITLIN TLS S+LAH+V                                 
Subjt:  VSSILRAHSFSGHVDGSSPSPEQFVRSATSTITTKVNTAFLQWSSRDQGLITLINATLSPSALAHIV---------------------------------

Query:  -----------------DDEEILVHILNGLTSNFNAFRTSIRTRNDTISVNELSVLLEAEEKTLAAHSSSTDPVPTAMVSIKGAQFPNS
                         +DEEILVH  NGL + FNAFRTSIRTR+D IS+ EL  LL +EE T+ A +S+ + +PT M +    Q  +S
Subjt:  -----------------DDEEILVHILNGLTSNFNAFRTSIRTRNDTISVNELSVLLEAEEKTLAAHSSSTDPVPTAMVSIKGAQFPNS

KAA0067173.1 retrotransposon protein [Cucumis melo var. makuwa]1.6e-2644.32Show/hide
Query:  RVSSILRAHSFSGHVDGSSPSPEQFVRSATSTITTKVNTAFLQWSSRDQGLITLINATLSPSALAHIV---------------------------DDEEI
        +VSSIL+AHSF GH+D + P P + + S+T    +++N  +LQW SR Q LITLINATLS SALAH+V                           +DEEI
Subjt:  RVSSILRAHSFSGHVDGSSPSPEQFVRSATSTITTKVNTAFLQWSSRDQGLITLINATLSPSALAHIV---------------------------DDEEI

Query:  LVHILNGLTSNFNAFRTSIRTRNDTISVNELSVLLEAEEKTLAAHSSSTDPVPTAMVSI----------KGAQFPNSGN--FNNN
        LVH LNGL  +FNAFRTSIRTR+  IS+ EL  LL +EE T+ A +S+ + +PTAM +           +G +F ++GN  FN++
Subjt:  LVHILNGLTSNFNAFRTSIRTRNDTISVNELSVLLEAEEKTLAAHSSSTDPVPTAMVSI----------KGAQFPNSGN--FNNN

TYJ97594.1 putative mitochondrial protein [Cucumis melo var. makuwa]4.4e-2445.4Show/hide
Query:  RVSSILRAHSFSGHVDGSSPSPEQFVRSATSTITTKVNTAFLQWSSRDQGLITLINATLSPSALAHIV---------------------------DDEEI
        +VSSIL+AHS  GH+D + P P + + S+T    +++N  +LQW SRDQ LITLINATLS SAL H+V                            DEEI
Subjt:  RVSSILRAHSFSGHVDGSSPSPEQFVRSATSTITTKVNTAFLQWSSRDQGLITLINATLSPSALAHIV---------------------------DDEEI

Query:  LVHILNGLTSNFNAFRTSIRTRNDTISVNELSVLLEAEEKTLAAHSSSTDPVPTAMVSIKGAQ
        LVH LNGL++ FNAF TSIRTR+  IS+ EL  LL  EE T+   +S+ + +PTAM +    Q
Subjt:  LVHILNGLTSNFNAFRTSIRTRNDTISVNELSVLLEAEEKTLAAHSSSTDPVPTAMVSIKGAQ

TYK11141.1 putative mitochondrial protein [Cucumis melo var. makuwa]5.7e-2441.24Show/hide
Query:  RVSSILRAHSFSGHVDGSSPSPEQFVRSATSTITTKVNTAFLQWSSRDQGLITLINATLSPSALAHIV--------------------------------
        +VSSIL+AHS  GH+D + P P +   S+T    +++N  ++QW SRDQ LITLINATLS SALAH+V                                
Subjt:  RVSSILRAHSFSGHVDGSSPSPEQFVRSATSTITTKVNTAFLQWSSRDQGLITLINATLSPSALAHIV--------------------------------

Query:  ----DDEEILVHILNGLTSNFNAFRTSIRTRNDTISVNELSVLLEAEEKTLAAHSSSTDPVPTAMVS----------IKGAQFPNSGNFNNNKA
            + EEILVH LNGL + FNAFRTSIRTRN  IS+ EL  LL  EE T+ A++S+ + + TAM +          ++G  F ++GN N N +
Subjt:  ----DDEEILVHILNGLTSNFNAFRTSIRTRNDTISVNELSVLLEAEEKTLAAHSSSTDPVPTAMVS----------IKGAQFPNSGNFNNNKA

TrEMBL top hitse value%identityAlignment
A0A5A7UPN3 Beta-glucosidase 18-like1.2e-2239.68Show/hide
Query:  VSSILRAHSFSGHVDGSSPSPEQFVRSATSTITTKVNTAFLQWSSRDQGLITLINATLSPSALAHIV---------------------------------
        VSSIL+AHS  GH+D + P P + + S+T    +++N  +LQW SRDQ LITLIN TLS S+LAH+V                                 
Subjt:  VSSILRAHSFSGHVDGSSPSPEQFVRSATSTITTKVNTAFLQWSSRDQGLITLINATLSPSALAHIV---------------------------------

Query:  -----------------DDEEILVHILNGLTSNFNAFRTSIRTRNDTISVNELSVLLEAEEKTLAAHSSSTDPVPTAMVSIKGAQFPNS
                         +DEEILVH  NGL + FNAFRTSIRTR+D IS+ EL  LL +EE T+ A +S+ + +PT M +    Q  +S
Subjt:  -----------------DDEEILVHILNGLTSNFNAFRTSIRTRNDTISVNELSVLLEAEEKTLAAHSSSTDPVPTAMVSIKGAQFPNS

A0A5A7UTE5 Putative mitochondrial protein2.1e-2445.4Show/hide
Query:  RVSSILRAHSFSGHVDGSSPSPEQFVRSATSTITTKVNTAFLQWSSRDQGLITLINATLSPSALAHIV---------------------------DDEEI
        +VSSIL+AHS  GH+D + P P + + S+T    +++N  +LQW SRDQ LITLINATLS SAL H+V                            DEEI
Subjt:  RVSSILRAHSFSGHVDGSSPSPEQFVRSATSTITTKVNTAFLQWSSRDQGLITLINATLSPSALAHIV---------------------------DDEEI

Query:  LVHILNGLTSNFNAFRTSIRTRNDTISVNELSVLLEAEEKTLAAHSSSTDPVPTAMVSIKGAQ
        LVH LNGL++ FNAF TSIRTR+  IS+ EL  LL  EE T+   +S+ + +PTAM +    Q
Subjt:  LVHILNGLTSNFNAFRTSIRTRNDTISVNELSVLLEAEEKTLAAHSSSTDPVPTAMVSIKGAQ

A0A5A7VGG0 Retrotransposon protein7.8e-2744.32Show/hide
Query:  RVSSILRAHSFSGHVDGSSPSPEQFVRSATSTITTKVNTAFLQWSSRDQGLITLINATLSPSALAHIV---------------------------DDEEI
        +VSSIL+AHSF GH+D + P P + + S+T    +++N  +LQW SR Q LITLINATLS SALAH+V                           +DEEI
Subjt:  RVSSILRAHSFSGHVDGSSPSPEQFVRSATSTITTKVNTAFLQWSSRDQGLITLINATLSPSALAHIV---------------------------DDEEI

Query:  LVHILNGLTSNFNAFRTSIRTRNDTISVNELSVLLEAEEKTLAAHSSSTDPVPTAMVSI----------KGAQFPNSGN--FNNN
        LVH LNGL  +FNAFRTSIRTR+  IS+ EL  LL +EE T+ A +S+ + +PTAM +           +G +F ++GN  FN++
Subjt:  LVHILNGLTSNFNAFRTSIRTRNDTISVNELSVLLEAEEKTLAAHSSSTDPVPTAMVSI----------KGAQFPNSGN--FNNN

A0A5D3BEU0 Putative mitochondrial protein2.1e-2445.4Show/hide
Query:  RVSSILRAHSFSGHVDGSSPSPEQFVRSATSTITTKVNTAFLQWSSRDQGLITLINATLSPSALAHIV---------------------------DDEEI
        +VSSIL+AHS  GH+D + P P + + S+T    +++N  +LQW SRDQ LITLINATLS SAL H+V                            DEEI
Subjt:  RVSSILRAHSFSGHVDGSSPSPEQFVRSATSTITTKVNTAFLQWSSRDQGLITLINATLSPSALAHIV---------------------------DDEEI

Query:  LVHILNGLTSNFNAFRTSIRTRNDTISVNELSVLLEAEEKTLAAHSSSTDPVPTAMVSIKGAQ
        LVH LNGL++ FNAF TSIRTR+  IS+ EL  LL  EE T+   +S+ + +PTAM +    Q
Subjt:  LVHILNGLTSNFNAFRTSIRTRNDTISVNELSVLLEAEEKTLAAHSSSTDPVPTAMVSIKGAQ

A0A5D3CH60 Putative mitochondrial protein2.8e-2441.24Show/hide
Query:  RVSSILRAHSFSGHVDGSSPSPEQFVRSATSTITTKVNTAFLQWSSRDQGLITLINATLSPSALAHIV--------------------------------
        +VSSIL+AHS  GH+D + P P +   S+T    +++N  ++QW SRDQ LITLINATLS SALAH+V                                
Subjt:  RVSSILRAHSFSGHVDGSSPSPEQFVRSATSTITTKVNTAFLQWSSRDQGLITLINATLSPSALAHIV--------------------------------

Query:  ----DDEEILVHILNGLTSNFNAFRTSIRTRNDTISVNELSVLLEAEEKTLAAHSSSTDPVPTAMVS----------IKGAQFPNSGNFNNNKA
            + EEILVH LNGL + FNAFRTSIRTRN  IS+ EL  LL  EE T+ A++S+ + + TAM +          ++G  F ++GN N N +
Subjt:  ----DDEEILVHILNGLTSNFNAFRTSIRTRNDTISVNELSVLLEAEEKTLAAHSSSTDPVPTAMVS----------IKGAQFPNSGNFNNNKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCCTGCACGGGAACCGAAATTCCACGAAGGTCACACTACTCGATCTCCGATCTAATCATAACGACAAAGCCTGTTTGGGGAAGGAAACCAGAGTGTCCTCAATTCT
ACGAGCACATTCCTTTTCTGGCCATGTTGATGGTTCTTCTCCTTCTCCTGAGCAGTTTGTTCGATCTGCCACTAGTACGATAACCACCAAAGTCAATACTGCATTCCTTC
AATGGAGTTCTCGTGATCAGGGTCTTATCACACTAATTAATGCTACACTTTCACCCTCTGCCTTAGCACATATTGTCGATGATGAGGAAATTCTTGTTCATATTCTTAAT
GGTCTAACTTCAAACTTTAATGCCTTCCGCACTTCTATTAGAACACGGAATGACACTATTTCTGTAAATGAACTTTCTGTTTTGCTTGAGGCAGAGGAGAAAACATTGGC
GGCACATTCTTCTTCCACTGATCCTGTACCAACTGCAATGGTATCTATCAAGGGCGCTCAATTTCCTAATTCTGGAAATTTCAATAATAATAAAGCAGTGGCAATCGTGG
CAATTTTGGCAGAGGCAATCGTGGCAATAATGGTGGCGGAAATTTTAGCAAAAGTAGTGGTGGTGGCCTTCTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGCCTGCACGGGAACCGAAATTCCACGAAGGTCACACTACTCGATCTCCGATCTAATCATAACGACAAAGCCTGTTTGGGGAAGGAAACCAGAGTGTCCTCAATTCT
ACGAGCACATTCCTTTTCTGGCCATGTTGATGGTTCTTCTCCTTCTCCTGAGCAGTTTGTTCGATCTGCCACTAGTACGATAACCACCAAAGTCAATACTGCATTCCTTC
AATGGAGTTCTCGTGATCAGGGTCTTATCACACTAATTAATGCTACACTTTCACCCTCTGCCTTAGCACATATTGTCGATGATGAGGAAATTCTTGTTCATATTCTTAAT
GGTCTAACTTCAAACTTTAATGCCTTCCGCACTTCTATTAGAACACGGAATGACACTATTTCTGTAAATGAACTTTCTGTTTTGCTTGAGGCAGAGGAGAAAACATTGGC
GGCACATTCTTCTTCCACTGATCCTGTACCAACTGCAATGGTATCTATCAAGGGCGCTCAATTTCCTAATTCTGGAAATTTCAATAATAATAAAGCAGTGGCAATCGTGG
CAATTTTGGCAGAGGCAATCGTGGCAATAATGGTGGCGGAAATTTTAGCAAAAGTAGTGGTGGTGGCCTTCTACTAA
Protein sequenceShow/hide protein sequence
MCLHGNRNSTKVTLLDLRSNHNDKACLGKETRVSSILRAHSFSGHVDGSSPSPEQFVRSATSTITTKVNTAFLQWSSRDQGLITLINATLSPSALAHIVDDEEILVHILN
GLTSNFNAFRTSIRTRNDTISVNELSVLLEAEEKTLAAHSSSTDPVPTAMVSIKGAQFPNSGNFNNNKAVAIVAILAEAIVAIMVAEILAKVVVVAFY