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Moc07g04340 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g04340
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDNA-directed DNA polymerase
Genome locationchr7:3744063..3745397
RNA-Seq ExpressionMoc07g04340
SyntenyMoc07g04340
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143639.1 uncharacterized protein LOC111013500 [Momordica charantia]6.4e-1967.5Show/hide
Query:  TPQVHDEQVTFNVLNAMRLPDEVEECSTIGAMMEELQQMMVDDLKADLEVAEKESKIAPGAILPEFERFEFLQPTIVDLK
        T +V+DEQ+TFNVL+  RLPDEVE+CS IGA+MEELQ+M+V+DL+ADLE AEKE+    G ILP FE FE  QPTI DLK
Subjt:  TPQVHDEQVTFNVLNAMRLPDEVEECSTIGAMMEELQQMMVDDLKADLEVAEKESKIAPGAILPEFERFEFLQPTIVDLK

XP_030479560.1 uncharacterized protein LOC115696816 [Cannabis sativa]6.4e-1946.53Show/hide
Query:  TPQVHDEQVTFNVLNAMRLPDEVEECSTIGAM---------MEELQQMMVDDLKADLEVAEKESKI-----APGAILPEFER-FEFLQPTIVDLKALQPS
        T +V+D+++TFNV NAMR PDE+++CS +  +          E  +   V +   DLE   ++ +I     AP    P+F+R FE L+    + K  +PS
Subjt:  TPQVHDEQVTFNVLNAMRLPDEVEECSTIGAM---------MEELQQMMVDDLKADLEVAEKESKI-----APGAILPEFER-FEFLQPTIVDLKALQPS

Query:  IMEPPELEKKPLPSHLKYAYLGLNDTLPVIISSYLSNEHEYLLL
        I EPPELE KPLPSHLKYAYLG N+TLPVIIS+ L  E E LLL
Subjt:  IMEPPELEKKPLPSHLKYAYLGLNDTLPVIISSYLSNEHEYLLL

XP_030485610.1 uncharacterized protein LOC115702304 [Cannabis sativa]4.6e-1745.14Show/hide
Query:  TPQVHDEQVTFNVLNAMRLPDEVEECSTIGAM-------------MEELQQMMVDDLKADLEVAEKE-SKIAPGAILPEFER-FEFLQPTIVDLKALQPS
        T +V+D++VTFNV NAMR  DE+EECS +  +              +E     ++DL+A  E  E + + + P    P+F+R FE L+    + K  +PS
Subjt:  TPQVHDEQVTFNVLNAMRLPDEVEECSTIGAM-------------MEELQQMMVDDLKADLEVAEKE-SKIAPGAILPEFER-FEFLQPTIVDLKALQPS

Query:  IMEPPELEKKPLPSHLKYAYLGLNDTLPVIISSYLSNEHEYLLL
        I EPP+LE KPLPSHLKYAYLG N+ LP+IIS+ L  E E LLL
Subjt:  IMEPPELEKKPLPSHLKYAYLGLNDTLPVIISSYLSNEHEYLLL

XP_030502183.1 uncharacterized protein LOC115717351 [Cannabis sativa]2.1e-1747.22Show/hide
Query:  TPQVHDEQVTFNVLNAMRLPDEVEECSTIGA----MMEELQQMMVDDLK-----ADLE-VAEKESK----IAPGAILPEFER-FEFLQPTIVDLKALQPS
        T +V+D++VTFNV NAMR PDE+EECS I      + E+  +    D K      +LE ++E E      + P   +P+F++ FE L+    + K  +PS
Subjt:  TPQVHDEQVTFNVLNAMRLPDEVEECSTIGA----MMEELQQMMVDDLK-----ADLE-VAEKESK----IAPGAILPEFER-FEFLQPTIVDLKALQPS

Query:  IMEPPELEKKPLPSHLKYAYLGLNDTLPVIISSYLSNEHEYLLL
          EPP+LE KPLPSHLKYAYLG NDTLPVII+S L  E E  LL
Subjt:  IMEPPELEKKPLPSHLKYAYLGLNDTLPVIISSYLSNEHEYLLL

XP_030504461.1 uncharacterized protein LOC115719521 [Cannabis sativa]9.0e-2148.61Show/hide
Query:  TPQVHDEQVTFNVLNAMRLPDEVEECSTIGAM-------------MEELQQMMVDDLKADLEVAEKE-SKIAPGAILPEFER-FEFLQPTIVDLKALQPS
        T +V+D++VTFNV NAMR PDE+EECS +  +              +E     ++DL+A  E  E + S + P    P+F+R FE L+    + K L+PS
Subjt:  TPQVHDEQVTFNVLNAMRLPDEVEECSTIGAM-------------MEELQQMMVDDLKADLEVAEKE-SKIAPGAILPEFER-FEFLQPTIVDLKALQPS

Query:  IMEPPELEKKPLPSHLKYAYLGLNDTLPVIISSYLSNEHEYLLL
        I EPP+LE KPLPSHLKYAYLG N+TLPVIIS++L  E E LLL
Subjt:  IMEPPELEKKPLPSHLKYAYLGLNDTLPVIISSYLSNEHEYLLL

TrEMBL top hitse value%identityAlignment
A0A2G9FWP6 DNA-directed DNA polymerase4.7e-1531.88Show/hide
Query:  EFMTRTDDAVRSLEMQVGQIANDQKSRPQSTLPGHTENPKRDREGKEYCKAVITRSGLSYDGPSLPDERTNA-VKPVSASISNPQQEEKAEPVSSE----
        +FM  T    ++++ Q+GQ+ N   SRPQ +LP +TE P   +EGK  C+A+    G  + G +L D   +  + P S   +    E K++ ++ +    
Subjt:  EFMTRTDDAVRSLEMQVGQIANDQKSRPQSTLPGHTENPKRDREGKEYCKAVITRSGLSYDGPSLPDERTNA-VKPVSASISNPQQEEKAEPVSSE----

Query:  ----EKG------KKADK------------------GKQVV----SSTTPQVHDEQVTFNVLNAMRLPDEVEECSTIGAMMEELQQMMVDDLKADLEVAE
             KG       K DK                  G+ ++       T  V D+Q+TFNV  AM+  ++ +EC  I          + D+L  +  +A+
Subjt:  ----EKG------KKADK------------------GKQVV----SSTTPQVHDEQVTFNVLNAMRLPDEVEECSTIGAMMEELQQMMVDDLKADLEVAE

Query:  KESKIAPGAILP--EFERFEFLQ--PTIVDLKALQ---PSIMEPPELEKKPLPSHLKYAYLGLNDTLPVIISSYLS
        +   +   A+L   + E  E L+   T+   K+     PSI EPP LE KPLPSHL+YAYLG ++TLPVIISS LS
Subjt:  KESKIAPGAILP--EFERFEFLQ--PTIVDLKALQ---PSIMEPPELEKKPLPSHLKYAYLGLNDTLPVIISSYLS

A0A2G9IA86 DNA-directed DNA polymerase6.7e-1442.75Show/hide
Query:  TPQVHDEQVTFNVLNAMRLPDEVEECSTIG---------AMMEELQQMMVDDLKADLEVAEKESKIAPGAILPEFERFEFLQPTIVDLKALQPSIMEPPE
        T +V D+Q+TFNV  AM+ P+E +EC T+          ++ + L++ ++D L  D E   +  K   G+   +    E L+ T    K L+PSI E P 
Subjt:  TPQVHDEQVTFNVLNAMRLPDEVEECSTIG---------AMMEELQQMMVDDLKADLEVAEKESKIAPGAILPEFERFEFLQPTIVDLKALQPSIMEPPE

Query:  LEKKPLPSHLKYAYLGLNDTLPVIISSYLSN
        LE KPLPSHL Y YLG +DTLPVIISS LS+
Subjt:  LEKKPLPSHLKYAYLGLNDTLPVIISSYLSN

A0A6J1CPX1 uncharacterized protein LOC1110135003.1e-1967.5Show/hide
Query:  TPQVHDEQVTFNVLNAMRLPDEVEECSTIGAMMEELQQMMVDDLKADLEVAEKESKIAPGAILPEFERFEFLQPTIVDLK
        T +V+DEQ+TFNVL+  RLPDEVE+CS IGA+MEELQ+M+V+DL+ADLE AEKE+    G ILP FE FE  QPTI DLK
Subjt:  TPQVHDEQVTFNVLNAMRLPDEVEECSTIGAMMEELQQMMVDDLKADLEVAEKESKIAPGAILPEFERFEFLQPTIVDLK

A0A6J1DBX0 uncharacterized protein LOC1110189012.9e-1774.65Show/hide
Query:  TPQVHDEQVTFNVLNAMRLPDEVEECSTIGAMMEELQQMMVDDLKADLEVAEKESKIAPGAILPEFERFEF
        T +V+DEQVTFNVL+AMRLPD+VEECSTIGA+MEELQQM+V+DL+ADLEVAEKES     AILP+FE   F
Subjt:  TPQVHDEQVTFNVLNAMRLPDEVEECSTIGAMMEELQQMMVDDLKADLEVAEKESKIAPGAILPEFERFEF

A0A6J1E110 uncharacterized protein LOC1110254242.1e-1530.52Show/hide
Query:  MKEFMTRTDDAV-------RSLEMQVGQIANDQKSRPQSTLPGHTENPKRDREGKEYCKAVITRSGLSYDGPSLPDERTNAVKPVSASISNPQQEEKAEP
        MKE+M RTD  +       R+ E Q+G +AN  K+RPQ +  GHTE PK   EGKE CKAV  RSGL YD P++P                         
Subjt:  MKEFMTRTDDAV-------RSLEMQVGQIANDQKSRPQSTLPGHTENPKRDREGKEYCKAVITRSGLSYDGPSLPDERTNAVKPVSASISNPQQEEKAEP

Query:  VSSEEKGKKADKGKQVVSSTTPQVHDEQVTFNVLNAMRLPDEVEECSTIGAMMEELQQMMVDDLKADLEVAEKESKIAPGAILPEFERFEFLQPTIVDLK
                                                                                                      T V + 
Subjt:  VSSEEKGKKADKGKQVVSSTTPQVHDEQVTFNVLNAMRLPDEVEECSTIGAMMEELQQMMVDDLKADLEVAEKESKIAPGAILPEFERFEFLQPTIVDLK

Query:  ALQPSIMEPPELEKKPLPSHLKYAYLGLNDTLPVIISSYLSNEHEYLLL
        + +P+I+EPP LE+KPLPSHLKYAYLG NDTLPVII+S LS  +EY LL
Subjt:  ALQPSIMEPPELEKKPLPSHLKYAYLGLNDTLPVIISSYLSNEHEYLLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAAGAGTTCATGACAAGAACTGATGATGCGGTAAGAAGCTTGGAGATGCAAGTGGGGCAGATAGCTAATGATCAAAAATCTAGACCCCAAAGTACATTGCCTGG
ACACACAGAAAATCCGAAGCGAGATCGTGAGGGAAAGGAGTACTGTAAGGCGGTTATCACGAGAAGCGGATTAAGTTATGATGGACCCTCACTTCCAGATGAAAGAACTA
ATGCAGTTAAACCTGTTTCTGCATCCATCTCCAATCCACAACAAGAAGAGAAAGCAGAACCCGTAAGTTCAGAAGAAAAAGGTAAGAAGGCAGATAAAGGTAAGCAAGTA
GTGTCTAGTACTACTCCACAGGTCCATGATGAGCAAGTAACTTTCAATGTCCTCAATGCGATGCGTCTCCCGGATGAAGTCGAGGAGTGCTCTACAATAGGGGCAATGAT
GGAGGAACTCCAGCAAATGATGGTGGACGACTTAAAAGCAGATTTGGAGGTCGCAGAAAAAGAATCCAAAATTGCGCCTGGTGCAATTTTGCCCGAATTTGAGCGTTTTG
AGTTTTTGCAGCCAACAATAGTGGATTTGAAGGCATTACAACCTTCCATCATGGAACCTCCAGAATTGGAGAAGAAACCTCTACCTTCTCATTTAAAATATGCTTATTTG
GGTTTAAACGATACTTTGCCCGTTATCATTTCTTCATATTTATCTAATGAACATGAATATTTGCTTTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGAAAGAGTTCATGACAAGAACTGATGATGCGGTAAGAAGCTTGGAGATGCAAGTGGGGCAGATAGCTAATGATCAAAAATCTAGACCCCAAAGTACATTGCCTGG
ACACACAGAAAATCCGAAGCGAGATCGTGAGGGAAAGGAGTACTGTAAGGCGGTTATCACGAGAAGCGGATTAAGTTATGATGGACCCTCACTTCCAGATGAAAGAACTA
ATGCAGTTAAACCTGTTTCTGCATCCATCTCCAATCCACAACAAGAAGAGAAAGCAGAACCCGTAAGTTCAGAAGAAAAAGGTAAGAAGGCAGATAAAGGTAAGCAAGTA
GTGTCTAGTACTACTCCACAGGTCCATGATGAGCAAGTAACTTTCAATGTCCTCAATGCGATGCGTCTCCCGGATGAAGTCGAGGAGTGCTCTACAATAGGGGCAATGAT
GGAGGAACTCCAGCAAATGATGGTGGACGACTTAAAAGCAGATTTGGAGGTCGCAGAAAAAGAATCCAAAATTGCGCCTGGTGCAATTTTGCCCGAATTTGAGCGTTTTG
AGTTTTTGCAGCCAACAATAGTGGATTTGAAGGCATTACAACCTTCCATCATGGAACCTCCAGAATTGGAGAAGAAACCTCTACCTTCTCATTTAAAATATGCTTATTTG
GGTTTAAACGATACTTTGCCCGTTATCATTTCTTCATATTTATCTAATGAACATGAATATTTGCTTTTGTAG
Protein sequenceShow/hide protein sequence
MMKEFMTRTDDAVRSLEMQVGQIANDQKSRPQSTLPGHTENPKRDREGKEYCKAVITRSGLSYDGPSLPDERTNAVKPVSASISNPQQEEKAEPVSSEEKGKKADKGKQV
VSSTTPQVHDEQVTFNVLNAMRLPDEVEECSTIGAMMEELQQMMVDDLKADLEVAEKESKIAPGAILPEFERFEFLQPTIVDLKALQPSIMEPPELEKKPLPSHLKYAYL
GLNDTLPVIISSYLSNEHEYLLL