; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc07g05660 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g05660
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionphotosystem II CP47 reaction center protein
Genome locationchr7:4738921..4742340
RNA-Seq ExpressionMoc07g05660
SyntenyMoc07g05660
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0022904 - respiratory electron transport chain (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0009521 - photosystem (cellular component)
GO:0043229 - intracellular organelle (cellular component)
GO:0009055 - electron transfer activity (molecular function)
GO:0016168 - chlorophyll binding (molecular function)
InterPro domainsIPR000932 - Photosystem antenna protein-like
IPR005797 - Cytochrome b/b6, N-terminal
IPR016174 - Di-haem cytochrome, transmembrane
IPR027387 - Cytochrome b/b6-like domain superfamily
IPR036001 - Photosystem antenna protein-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3449784.1 hypothetical protein FNV43_RR05862 [Rhamnella rubrinervis]2.9e-8135.73Show/hide
Query:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------
        M LPW RVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELA+FDP DPVLDPMWRQ                                          
Subjt:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------

Query:  ----------AIWHWVRLLWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGI
                  AIWHWV   W   I C+                                        IWVSDPYGLTGRVQ VNP WGV+GFDPFVPGGI
Subjt:  ----------AIWHWVRLLWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGI

Query:  TSHHMAA---------------------------------------------------------------------------------------------
         SHH+AA                                                                                             
Subjt:  TSHHMAA---------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDA----------
                                          DRATLKS+GVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA IDPDLDA          
Subjt:  ----------------------------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDA----------

Query:  ------------------------------------------------LIHRWSASMMVLMMILHIFRVYLTGGFKKPHELTWVTGVVLAVLTASFGVTG
                                                        ++HRWSASMMVLMMILH+FRVYLTGGFKKP ELTWVTGVVLAVLTASFGVTG
Subjt:  ------------------------------------------------LIHRWSASMMVLMMILHIFRVYLTGGFKKPHELTWVTGVVLAVLTASFGVTG

Query:  YSLPRDQIGYWAVKIVTAVPEAIPVIG
        YSLP DQIGYWAVKIVT VPEAIP IG
Subjt:  YSLPRDQIGYWAVKIVTAVPEAIPVIG

KVI04368.1 cytochrome b/b6, partial [Cynara cardunculus var. scolymus]1.5e-6931.4Show/hide
Query:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------
        M LPW RVHTVVLNDPGRLL VHIMHTALVA WAGSMALYELA+F P DPVLDPMWRQ                                          
Subjt:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------

Query:  ----------AIWHWVRLLWFWRISCNRIV-----------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGITSHHMAA-------------
                  AIWHWV   W   I C+  V                 IWVSDPYGLTG+VQ+VNP+WGV+GFDPFVPGGI SHH+AA             
Subjt:  ----------AIWHWVRLLWFWRISCNRIV-----------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGITSHHMAA-------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------------------------DRATLKSNGVFRSSPRGWFTFGH
                                                                                     D ATLKS+GVFRSSPRGWFTFGH
Subjt:  -----------------------------------------------------------------------------DRATLKSNGVFRSSPRGWFTFGH

Query:  ASFALLFFFGHIWHGARTLFRDVFARIDPDLDA-------------------------------------------------------------------
        ASFALLFFFGHIWHGARTLFRDVFA IDPDLDA                                                                   
Subjt:  ASFALLFFFGHIWHGARTLFRDVFARIDPDLDA-------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------LIHRWSASMMVLMMILHIFRVYLTGGFKKPHELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTAVPEAIPVI
                      +HRWSASMMVLMMILH+F VYLTGGFKKP ELTWVTGVVL VLT SFGVTGYSLPRDQIGYW VKIVT VPEAIPVI
Subjt:  -------------LIHRWSASMMVLMMILHIFRVYLTGGFKKPHELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTAVPEAIPVI

RZC73968.1 hypothetical protein C5167_049453 [Papaver somniferum]5.5e-7232.81Show/hide
Query:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ----------------------------------AIWHWVRL
        M   W RVHTVVLNDPGRLLSVHIMHTALV+GWAGSMALYELA+FDP DPVLDPMWRQ                                  AIW+WV  
Subjt:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ----------------------------------AIWHWVRL

Query:  LWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGITSHHMAA-----------
         W   I C+                                        IWVSDPYGLTG VQ+VNP WGV+GFDPF PGGI SHH+AA           
Subjt:  LWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGITSHHMAA-----------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDA----------------------------
                        D ATLKS+GVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA I PDLD+                            
Subjt:  ----------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDA----------------------------

Query:  ----------------------------------------------------------------LIHRWSASMMVLMMILHIFRVYLTGGFKKPHELTWV
                                                                         +HRWSASMMVLMMILH+FRVYLTG FKKP ELTWV
Subjt:  ----------------------------------------------------------------LIHRWSASMMVLMMILHIFRVYLTGGFKKPHELTWV

Query:  TGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTAVPEAIPVIG
        TGV+L +LTASFGVTGYSLPRDQI YWAVKIVT VP+AIPVIG
Subjt:  TGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTAVPEAIPVIG

XP_017644167.1 PREDICTED: photosystem II CP47 reaction center protein [Gossypium arboreum]3.1e-6729.79Show/hide
Query:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------
        M LPW RVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELA+FDP DPVLDPMWRQ                                          
Subjt:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------

Query:  ----------AIWHWVRLLWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGI
                  AIWHWV   W   I C+                                        IWVSDPYGLTG+VQ VNP WGV+GFDPFVPGGI
Subjt:  ----------AIWHWVRLLWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGI

Query:  TSHHMAA---------------------------------------------------------------------------------------------
         SHH+AA                                                                                             
Subjt:  TSHHMAA---------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDA----------
                                          DRATLKS+GVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA IDPDLDA          
Subjt:  ----------------------------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDA----------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------LIHRWSASMMVLMMILHIFRVYLTGGF
                                                                                  +HRWSASMMVLMMILH+FRVYLTGGF
Subjt:  -------------------------------------------------------------------------LIHRWSASMMVLMMILHIFRVYLTGGF

Query:  KKPHELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTAVPEAIPVIG
        KKP ELTWVTGVVL VLTASFGVTGYSLPRDQIGYWAVKIVT VPEAIPVIG
Subjt:  KKPHELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTAVPEAIPVIG

XP_027331156.1 uncharacterized protein LOC113846730 [Abrus precatorius]3.1e-6729.79Show/hide
Query:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------
        M LPW RVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELA+FDP DPVLDPMWRQ                                          
Subjt:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------

Query:  ----------AIWHWVRLLWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGI
                  AIWHWV   W   I C+                                        IWVSDPYGLTGRVQ++NP WGV+GFDPFVPGGI
Subjt:  ----------AIWHWVRLLWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGI

Query:  TSHHMAA---------------------------------------------------------------------------------------------
         SHH+AA                                                                                             
Subjt:  TSHHMAA---------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDA----------
                                          DRATLKS+GVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA IDPDLDA          
Subjt:  ----------------------------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDA----------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------LIHRWSASMMVLMMILHIFRVYLTGGF
                                                                                  +HRWSASMMVLMMILH+FRVYLTGGF
Subjt:  -------------------------------------------------------------------------LIHRWSASMMVLMMILHIFRVYLTGGF

Query:  KKPHELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTAVPEAIPVIG
        KKP ELTWVTGVVLAVLTASFGVTGYSLP DQIGYWAVKIVT VPEAIPVIG
Subjt:  KKPHELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTAVPEAIPVIG

TrEMBL top hitse value%identityAlignment
A0A118K2H4 Cytochrome b/b6 (Fragment)7.2e-7031.4Show/hide
Query:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------
        M LPW RVHTVVLNDPGRLL VHIMHTALVA WAGSMALYELA+F P DPVLDPMWRQ                                          
Subjt:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------

Query:  ----------AIWHWVRLLWFWRISCNRIV-----------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGITSHHMAA-------------
                  AIWHWV   W   I C+  V                 IWVSDPYGLTG+VQ+VNP+WGV+GFDPFVPGGI SHH+AA             
Subjt:  ----------AIWHWVRLLWFWRISCNRIV-----------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGITSHHMAA-------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------------------------DRATLKSNGVFRSSPRGWFTFGH
                                                                                     D ATLKS+GVFRSSPRGWFTFGH
Subjt:  -----------------------------------------------------------------------------DRATLKSNGVFRSSPRGWFTFGH

Query:  ASFALLFFFGHIWHGARTLFRDVFARIDPDLDA-------------------------------------------------------------------
        ASFALLFFFGHIWHGARTLFRDVFA IDPDLDA                                                                   
Subjt:  ASFALLFFFGHIWHGARTLFRDVFARIDPDLDA-------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------LIHRWSASMMVLMMILHIFRVYLTGGFKKPHELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTAVPEAIPVI
                      +HRWSASMMVLMMILH+F VYLTGGFKKP ELTWVTGVVL VLT SFGVTGYSLPRDQIGYW VKIVT VPEAIPVI
Subjt:  -------------LIHRWSASMMVLMMILHIFRVYLTGGFKKPHELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTAVPEAIPVI

A0A1U8LXQ6 Cytochrome b1.5e-6729.79Show/hide
Query:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------
        M LPW RVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELA+FDP DPVLDPMWRQ                                          
Subjt:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------

Query:  ----------AIWHWVRLLWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGI
                  AIWHWV   W   I C+                                        IWVSDPYGLTG+VQ VNP WGV+GFDPFVPGGI
Subjt:  ----------AIWHWVRLLWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGI

Query:  TSHHMAA---------------------------------------------------------------------------------------------
         SHH+AA                                                                                             
Subjt:  TSHHMAA---------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDA----------
                                          DRATLKS+GVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA IDPDLDA          
Subjt:  ----------------------------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDA----------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------LIHRWSASMMVLMMILHIFRVYLTGGF
                                                                                  +HRWSASMMVLMMILH+FRVYLTGGF
Subjt:  -------------------------------------------------------------------------LIHRWSASMMVLMMILHIFRVYLTGGF

Query:  KKPHELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTAVPEAIPVIG
        KKP ELTWVTGVVL VLTASFGVTGYSLPRDQIGYWAVKIVT VPEAIPVIG
Subjt:  KKPHELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTAVPEAIPVIG

A0A4Y7KPD4 CYTB_NTER domain-containing protein2.6e-7232.81Show/hide
Query:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ----------------------------------AIWHWVRL
        M   W RVHTVVLNDPGRLLSVHIMHTALV+GWAGSMALYELA+FDP DPVLDPMWRQ                                  AIW+WV  
Subjt:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ----------------------------------AIWHWVRL

Query:  LWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGITSHHMAA-----------
         W   I C+                                        IWVSDPYGLTG VQ+VNP WGV+GFDPF PGGI SHH+AA           
Subjt:  LWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGITSHHMAA-----------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDA----------------------------
                        D ATLKS+GVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA I PDLD+                            
Subjt:  ----------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDA----------------------------

Query:  ----------------------------------------------------------------LIHRWSASMMVLMMILHIFRVYLTGGFKKPHELTWV
                                                                         +HRWSASMMVLMMILH+FRVYLTG FKKP ELTWV
Subjt:  ----------------------------------------------------------------LIHRWSASMMVLMMILHIFRVYLTGGFKKPHELTWV

Query:  TGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTAVPEAIPVIG
        TGV+L +LTASFGVTGYSLPRDQI YWAVKIVT VP+AIPVIG
Subjt:  TGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTAVPEAIPVIG

A0A6P4Q204 photosystem II CP47 reaction center protein1.5e-6729.79Show/hide
Query:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------
        M LPW RVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELA+FDP DPVLDPMWRQ                                          
Subjt:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------

Query:  ----------AIWHWVRLLWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGI
                  AIWHWV   W   I C+                                        IWVSDPYGLTG+VQ VNP WGV+GFDPFVPGGI
Subjt:  ----------AIWHWVRLLWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGI

Query:  TSHHMAA---------------------------------------------------------------------------------------------
         SHH+AA                                                                                             
Subjt:  TSHHMAA---------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDA----------
                                          DRATLKS+GVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA IDPDLDA          
Subjt:  ----------------------------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDA----------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------LIHRWSASMMVLMMILHIFRVYLTGGF
                                                                                  +HRWSASMMVLMMILH+FRVYLTGGF
Subjt:  -------------------------------------------------------------------------LIHRWSASMMVLMMILHIFRVYLTGGF

Query:  KKPHELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTAVPEAIPVIG
        KKP ELTWVTGVVL VLTASFGVTGYSLPRDQIGYWAVKIVT VPEAIPVIG
Subjt:  KKPHELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTAVPEAIPVIG

A0A6P5Y5R8 Cytochrome b4.4e-6729.79Show/hide
Query:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------
        M LPW RVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELA+FDP DPVLDPMWRQ                                          
Subjt:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------

Query:  ----------AIWHWVRLLWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGI
                  AIWHWV   W   I C+                                        IWVSDPYGLTG+VQ VNP WGV+GFDPFVPGGI
Subjt:  ----------AIWHWVRLLWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGI

Query:  TSHHMAA---------------------------------------------------------------------------------------------
         SHH+AA                                                                                             
Subjt:  TSHHMAA---------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDA----------
                                          DRATLKS+GVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA IDPDLDA          
Subjt:  ----------------------------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDA----------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------LIHRWSASMMVLMMILHIFRVYLTGGF
                                                                                  +HRWSASMMVLMMILH+FRVYLTGGF
Subjt:  -------------------------------------------------------------------------LIHRWSASMMVLMMILHIFRVYLTGGF

Query:  KKPHELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTAVPEAIPVIG
        KKP ELTWVTGVVLAVLTASFGVTGYSLP DQIGYWAVKIVT VPEAIPVIG
Subjt:  KKPHELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTAVPEAIPVIG

SwissProt top hitse value%identityAlignment
A4GGD1 Photosystem II CP47 reaction center protein2.0e-4830.49Show/hide
Query:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------
        M LPW RVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELA+FDP DPVLDPMWRQ                                          
Subjt:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------

Query:  ----------AIWHWVRLLWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGI
                  AIWHWV   W   I C+                                        IWVSDPYGLTGR+Q+VNP WGV+GFDPFVPGG+
Subjt:  ----------AIWHWVRLLWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGI

Query:  TSHHMAA---------------------------------------------------------------------------------------------
         SHH+AA                                                                                             
Subjt:  TSHHMAA---------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDALI
                                          DRATLKS+GVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA IDPDLDA +
Subjt:  ----------------------------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDALI

A4QJE1 Photosystem II CP47 reaction center protein4.4e-4830.69Show/hide
Query:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------
        M LPW RVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELA+FDP DPVLDPMWRQ                                          
Subjt:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------

Query:  ----------AIWHWVRLLWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGI
                  AIWHWV   W   I C+                                        IWVSDPYGLTG+VQ VNP WGV+GFDPFVPGGI
Subjt:  ----------AIWHWVRLLWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGI

Query:  TSHHMAA---------------------------------------------------------------------------------------------
         SHH+AA                                                                                             
Subjt:  TSHHMAA---------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDALI
                                          DRATLKS+GVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA IDPDLDA +
Subjt:  ----------------------------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDALI

B2LML9 Photosystem II CP47 reaction center protein2.0e-4830.69Show/hide
Query:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------
        M LPW RVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELA+FDP DPVLDPMWRQ                                          
Subjt:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------

Query:  ----------AIWHWVRLLWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGI
                  AIWHWV   W   I C+                                        IWVSDPYGLTG+VQ+VNP+WGV+GFDPFVPGGI
Subjt:  ----------AIWHWVRLLWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGI

Query:  TSHHMAA---------------------------------------------------------------------------------------------
         SHH+AA                                                                                             
Subjt:  TSHHMAA---------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDALI
                                          DRATLKS+GVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA IDPDLDA +
Subjt:  ----------------------------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDALI

Q09WZ1 Photosystem II CP47 reaction center protein8.8e-4930.89Show/hide
Query:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------
        M LPW RVHTVVLNDPGRL+SVHIMHTALVAGWAGSMALYELA+FDP DPVLDPMWRQ                                          
Subjt:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------

Query:  ----------AIWHWVRLLWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGI
                  AIWHWV   W   I C+                                        IWVSDPYGLTGRVQAVNP WGV+GFDPFVPGGI
Subjt:  ----------AIWHWVRLLWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGI

Query:  TSHHMAA---------------------------------------------------------------------------------------------
         SHH+AA                                                                                             
Subjt:  TSHHMAA---------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDALI
                                          DRATLKS+GVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA IDPDLDA +
Subjt:  ----------------------------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDALI

Q2PMQ9 Photosystem II CP47 reaction center protein2.0e-4830.49Show/hide
Query:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------
        M LPW RVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELA+FDP DPVLDPMWRQ                                          
Subjt:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------

Query:  ----------AIWHWVRLLWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGI
                  AIWHWV   W   I C+                                        IWVSDPYGLTGR+Q+VNP WGV+GFDPFVPGG+
Subjt:  ----------AIWHWVRLLWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGI

Query:  TSHHMAA---------------------------------------------------------------------------------------------
         SHH+AA                                                                                             
Subjt:  TSHHMAA---------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDALI
                                          DRATLKS+GVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA IDPDLDA +
Subjt:  ----------------------------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDALI

Arabidopsis top hitse value%identityAlignment
AT2G07727.1 Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal4.9e-1035.9Show/hide
Query:  IHRWSASMMVLMMILHIFRVYLTGGFKKPHELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTAVPEAIPVIG
        +H   ASM ++++ LHIFR      +  P E  W  GVV+ +L       GY LP  Q+ +W   ++T++  AIPV+G
Subjt:  IHRWSASMMVLMMILHIFRVYLTGGFKKPHELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTAVPEAIPVIG

ATCG00280.1 photosystem II reaction center protein C1.8e-0436.73Show/hide
Query:  WCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLD
        W   +  ++N  G+LL  H+ H  L+  WAG+M L+E+A F P  P+ +
Subjt:  WCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLD

ATCG00680.1 photosystem II reaction center protein B6.9e-4930.49Show/hide
Query:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------
        M LPW RVHTVVLNDPGRLL+VHIMHTALVAGWAGSMALYELA+FDP DPVLDPMWRQ                                          
Subjt:  MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQ------------------------------------------

Query:  ----------AIWHWVRLLWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGI
                  AIWHWV   W   I C+                                        IWVSDPYGLTG+VQ VNP WGV+GFDPFVPGGI
Subjt:  ----------AIWHWVRLLWFWRISCNRIV-------------------------------------IWVSDPYGLTGRVQAVNPTWGVKGFDPFVPGGI

Query:  TSHHMAA---------------------------------------------------------------------------------------------
         SHH+AA                                                                                             
Subjt:  TSHHMAA---------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDALI
                                          DRATLKS+GVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA IDPDLDA +
Subjt:  ----------------------------------DRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDALI

ATCG00720.1 photosynthetic electron transfer B3.9e-3691.03Show/hide
Query:  IHRWSASMMVLMMILHIFRVYLTGGFKKPHELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTAVPEAIPVIG
        +HRWSASMMVLMMILH+FRVYLTGGFKKP ELTWVTGVVL VLTASFGVTGYSLP DQIGYWAVKIVT VP+AIPVIG
Subjt:  IHRWSASMMVLMMILHIFRVYLTGGFKKPHELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTAVPEAIPVIG

ATMG00220.1 apocytochrome b4.9e-1035.9Show/hide
Query:  IHRWSASMMVLMMILHIFRVYLTGGFKKPHELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTAVPEAIPVIG
        +H   ASM ++++ LHIFR      +  P E  W  GVV+ +L       GY LP  Q+ +W   ++T++  AIPV+G
Subjt:  IHRWSASMMVLMMILHIFRVYLTGGFKKPHELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTAVPEAIPVIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGCCTTGGTGTCGTGTTCATACCGTTGTATTGAATGATCCCGGTCGTTTGCTTTCTGTTCATATAATGCATACAGCTCTAGTTGCTGGTTGGGCCGGT
TCAATGGCCCTATACGAATTAGCAATTTTTGATCCCTTCGATCCTGTTCTTGATCCAATGTGGAGACAAGCTATTTGGCATTGGGTGAGGTTGCTTTGGTTTTGG
CGCATTTCATGTAATAGGATTGTAATATGGGTATCCGATCCTTATGGATTAACCGGAAGGGTACAAGCTGTAAATCCTACGTGGGGTGTCAAAGGGTTTGATCCT
TTTGTTCCGGGCGGAATAACCTCTCATCATATGGCAGCAGATCGTGCTACTTTGAAATCCAATGGGGTTTTTCGTAGCAGTCCAAGGGGTTGGTTTACTTTTGGG
CATGCTTCGTTTGCTTTGCTCTTCTTCTTTGGACACATTTGGCATGGTGCTAGAACCTTGTTCAGAGATGTCTTTGCTAGGATTGACCCAGATTTGGATGCTCTA
ATTCATAGATGGTCGGCAAGTATGATGGTCTTAATGATGATTCTGCACATATTTCGCGTGTATCTTACTGGTGGCTTTAAAAAACCTCATGAATTGACTTGGGTT
ACTGGTGTGGTTCTGGCTGTATTGACTGCATCCTTTGGTGTAACTGGTTATTCCTTACCTCGGGACCAAATTGGTTATTGGGCAGTCAAAATTGTAACAGCCGTA
CCGGAAGCTATTCCAGTAATAGGGGTCGCCTTTGGTAGAGTTATTATGCGGAAGTGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTTGCCTTGGTGTCGTGTTCATACCGTTGTATTGAATGATCCCGGTCGTTTGCTTTCTGTTCATATAATGCATACAGCTCTAGTTGCTGGTTGGGCCGGT
TCAATGGCCCTATACGAATTAGCAATTTTTGATCCCTTCGATCCTGTTCTTGATCCAATGTGGAGACAAGCTATTTGGCATTGGGTGAGGTTGCTTTGGTTTTGG
CGCATTTCATGTAATAGGATTGTAATATGGGTATCCGATCCTTATGGATTAACCGGAAGGGTACAAGCTGTAAATCCTACGTGGGGTGTCAAAGGGTTTGATCCT
TTTGTTCCGGGCGGAATAACCTCTCATCATATGGCAGCAGATCGTGCTACTTTGAAATCCAATGGGGTTTTTCGTAGCAGTCCAAGGGGTTGGTTTACTTTTGGG
CATGCTTCGTTTGCTTTGCTCTTCTTCTTTGGACACATTTGGCATGGTGCTAGAACCTTGTTCAGAGATGTCTTTGCTAGGATTGACCCAGATTTGGATGCTCTA
ATTCATAGATGGTCGGCAAGTATGATGGTCTTAATGATGATTCTGCACATATTTCGCGTGTATCTTACTGGTGGCTTTAAAAAACCTCATGAATTGACTTGGGTT
ACTGGTGTGGTTCTGGCTGTATTGACTGCATCCTTTGGTGTAACTGGTTATTCCTTACCTCGGGACCAAATTGGTTATTGGGCAGTCAAAATTGTAACAGCCGTA
CCGGAAGCTATTCCAGTAATAGGGGTCGCCTTTGGTAGAGTTATTATGCGGAAGTGCTAG
Protein sequenceShow/hide protein sequence
MDLPWCRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAIFDPFDPVLDPMWRQAIWHWVRLLWFWRISCNRIVIWVSDPYGLTGRVQAVNPTWGVKGFDP
FVPGGITSHHMAADRATLKSNGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFARIDPDLDALIHRWSASMMVLMMILHIFRVYLTGGFKKPHELTWV
TGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTAVPEAIPVIGVAFGRVIMRKC