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Moc07g06150 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g06150
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationchr7:5066535..5073392
RNA-Seq ExpressionMoc07g06150
SyntenyMoc07g06150
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059666.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]8.2e-1165.67Show/hide
Query:  KSKAKKIQEAFILHLQRLANAHEETKISETKILYNVNLMSQEENEAKIAWEKLSILKDGTEYKKSVQ
        K KAKKIQEAF LH+Q+LANA  ETK  E K LYNV+  SQEE+E K+A EKL  L+DGT  +KSVQ
Subjt:  KSKAKKIQEAFILHLQRLANAHEETKISETKILYNVNLMSQEENEAKIAWEKLSILKDGTEYKKSVQ

KAA0065364.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]1.3e-1159.49Show/hide
Query:  KSKAKKIQEAFILHLQRLANAHEETKISETKILYNVNLMSQEENEAKIAWEKLSILKDGTEYKKSVQIGGQVPLQIAPL
        K KAKKIQEAF LH+Q+LANA  ETK  E K LYNV+  SQEE+  K+A EKL  L+DGT  +KSVQ   +V +Q+A L
Subjt:  KSKAKKIQEAFILHLQRLANAHEETKISETKILYNVNLMSQEENEAKIAWEKLSILKDGTEYKKSVQIGGQVPLQIAPL

KAA0067206.1 hypothetical protein E6C27_scaffold418G00080 [Cucumis melo var. makuwa]4.8e-1164.18Show/hide
Query:  KSKAKKIQEAFILHLQRLANAHEETKISETKILYNVNLMSQEENEAKIAWEKLSILKDGTEYKKSVQ
        K KAKKIQEAF LH+Q+L NA  E K  E K LYNV+  SQEE+E K+AWEKL  L+DGT  +KSVQ
Subjt:  KSKAKKIQEAFILHLQRLANAHEETKISETKILYNVNLMSQEENEAKIAWEKLSILKDGTEYKKSVQ

TYK20861.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]1.3e-1159.49Show/hide
Query:  KSKAKKIQEAFILHLQRLANAHEETKISETKILYNVNLMSQEENEAKIAWEKLSILKDGTEYKKSVQIGGQVPLQIAPL
        K KAKKIQEAF LH+Q+LANA  ETK  E K LYNV+  SQEE+  K+A EKL  L+DGT  +KSVQ   +V +Q+A L
Subjt:  KSKAKKIQEAFILHLQRLANAHEETKISETKILYNVNLMSQEENEAKIAWEKLSILKDGTEYKKSVQIGGQVPLQIAPL

TYK26105.1 F15O4.13 [Cucumis melo var. makuwa]8.2e-1165.67Show/hide
Query:  KSKAKKIQEAFILHLQRLANAHEETKISETKILYNVNLMSQEENEAKIAWEKLSILKDGTEYKKSVQ
        K KAKKIQEAF LH+Q+LANA  ETK  E K LYNV+  SQEE+E K+A EKL  L+DGT  +KSVQ
Subjt:  KSKAKKIQEAFILHLQRLANAHEETKISETKILYNVNLMSQEENEAKIAWEKLSILKDGTEYKKSVQ

TrEMBL top hitse value%identityAlignment
A0A5A7UZP1 Transposon Ty3-I Gag-Pol polyprotein4.0e-1165.67Show/hide
Query:  KSKAKKIQEAFILHLQRLANAHEETKISETKILYNVNLMSQEENEAKIAWEKLSILKDGTEYKKSVQ
        K KAKKIQEAF LH+Q+LANA  ETK  E K LYNV+  SQEE+E K+A EKL  L+DGT  +KSVQ
Subjt:  KSKAKKIQEAFILHLQRLANAHEETKISETKILYNVNLMSQEENEAKIAWEKLSILKDGTEYKKSVQ

A0A5A7VDK8 Transposon Ty3-I Gag-Pol polyprotein6.2e-1259.49Show/hide
Query:  KSKAKKIQEAFILHLQRLANAHEETKISETKILYNVNLMSQEENEAKIAWEKLSILKDGTEYKKSVQIGGQVPLQIAPL
        K KAKKIQEAF LH+Q+LANA  ETK  E K LYNV+  SQEE+  K+A EKL  L+DGT  +KSVQ   +V +Q+A L
Subjt:  KSKAKKIQEAFILHLQRLANAHEETKISETKILYNVNLMSQEENEAKIAWEKLSILKDGTEYKKSVQIGGQVPLQIAPL

A0A5A7VL78 RT_RNaseH_2 domain-containing protein2.3e-1164.18Show/hide
Query:  KSKAKKIQEAFILHLQRLANAHEETKISETKILYNVNLMSQEENEAKIAWEKLSILKDGTEYKKSVQ
        K KAKKIQEAF LH+Q+L NA  E K  E K LYNV+  SQEE+E K+AWEKL  L+DGT  +KSVQ
Subjt:  KSKAKKIQEAFILHLQRLANAHEETKISETKILYNVNLMSQEENEAKIAWEKLSILKDGTEYKKSVQ

A0A5D3DB73 Transposon Ty3-I Gag-Pol polyprotein6.2e-1259.49Show/hide
Query:  KSKAKKIQEAFILHLQRLANAHEETKISETKILYNVNLMSQEENEAKIAWEKLSILKDGTEYKKSVQIGGQVPLQIAPL
        K KAKKIQEAF LH+Q+LANA  ETK  E K LYNV+  SQEE+  K+A EKL  L+DGT  +KSVQ   +V +Q+A L
Subjt:  KSKAKKIQEAFILHLQRLANAHEETKISETKILYNVNLMSQEENEAKIAWEKLSILKDGTEYKKSVQIGGQVPLQIAPL

A0A5D3DRJ1 F15O4.134.0e-1165.67Show/hide
Query:  KSKAKKIQEAFILHLQRLANAHEETKISETKILYNVNLMSQEENEAKIAWEKLSILKDGTEYKKSVQ
        K KAKKIQEAF LH+Q+LANA  ETK  E K LYNV+  SQEE+E K+A EKL  L+DGT  +KSVQ
Subjt:  KSKAKKIQEAFILHLQRLANAHEETKISETKILYNVNLMSQEENEAKIAWEKLSILKDGTEYKKSVQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGTGTGTTGTGATACGAATCAATTTGTGACCAATTACAAAAGCAAAGCAAAGAAGATTCAAGAGGCTTTCATATTACATCTTCAAAGGCTAGCTAATGCA
CACGAGGAGACAAAGATTTCTGAGACCAAAATTCTTTACAATGTTAATTTAATGAGTCAAGAAGAGAATGAAGCAAAGATAGCATGGGAAAAGTTGTCTATTTTG
AAAGATGGCACGGAGTACAAAAAAAGTGTGCAGATTGGTGGACAGGTGCCTTTGCAAATTGCACCTCTTAGAAGCGTAATCCTAGCTTTTCTTGGGAAACTGAGT
TCTACTCTTTCACTACTGCTTTTGGATGCTGTAGAGACTAGGAGGGCCACGTGGTACCTGGACAAACAGCCCGGCTTGGGATCCACTCGACTTGAAACGAAAGAA
CTCGATGCCAGTGCGCCTCAGTTGTCCGACCAGGAAGGACGACGGTTAGAGGTGGTAGGGACGTTGCTCACAGTATGGCTGAACAGAAAGGAGCGCAGTTCCGAC
AATAGCAGGGTGGCTCCACCACCTGTGCCTTCTGGGTGTGTTGCCCAAAGCTATGGAATGCGCTTGTCGTATCAACAGAGTGTGTTGCTAGCTGCAACCCTGTTG
ACTGCTTCCATGGCTCGCCGCCCGTTTGTCAAGCATGTTCCGTCACTGGCCACTAAACAAGACCTTTCAGAGCTTCACACCATTTACCACATCCCTGACTATGTG
TCGATGCGCCTCCCATTTGCGGACGAAAGGATAAATACCCCTCTGCCTGGCTGGGTAAGTTTCTACCCGCAGATGTTCTGGAACAGGGTCAGGCTTCCCCTCTCT
CTTTTTGCCCAGGCGTTCCTGGTTTTCACTAGTGTGGCTCCGACACAACCGGCTCCCAACACATGTGGAGCTTTAATGGCACTGGCCATCCTTTGGCCAGAGTTG
GGAGGAGGTGAAGAGATGACTCTCCCGCTGCTGTCTACTATAACCCTGATGAAGTCTATCAGAGACTTTCCCAGAGTCTCCACGCTTATTACGACGGATGAGAGG
TTTACCGCACATCGTTTGATCGAGAATCCGAATGTCCCGACTAGAGGCAATGATGAGCGTCCCGCCCCCCGTGTGGCTCCAGTAGGTCTTGCGAGGCCACCATCA
ATTTCACCCACAAGACACGAACTCGTAACTTGGCCTCTCTTTCAGATCGGGCAAGCTTCCCCAAGCGGCATGGTCAATAGTGGGAGTGCTACATCGACTAGTGAT
ATAACGTTGACGGTGAGAGAAATTTTGGGTCCGAGCAGAAGAGCGAAAGATTCTGAGGATGCAGTACCGGATGGGGATGAGACCTTCGATGGTCCCGCCTTTGAG
AACACTCGATCGGTGGTCCATTCTCCTCTACATGAGGAGGACGTCACGTGGGCTTGCTTCAACGCCCCGCTAGCCGGTCATTCTCATGCCCTATCCCTGGCCCTG
CGGGATGAGCTTGCGGCTAAGGGGGTTCGGGAGCAGGAGTATCTAGTGAAGGGGAAGCGCATTGCTCGGGAGGATGCATCACGGGTAGAGGAGAAAGCCGCTCGC
CTACGTATAGAGCTAGACTACATCCAGCACGGAGCAGCTTCTGTTGAGGCCTGCATTAATGACTTCAAAGCGGCACATGAGAAGGCCGAGGAGGACCTTGAGATG
ACACGGGTAGAAGTGACTTCTCGGAATAGTCAGATCTCGAGCCTGGAGCAGTGCCTGAAGGAAACTGAAGATAAGTTGCTTAAAGCCGAAGAGGGGCAAGCAATG
GCGGCGGTTGCTTGTTTCGAAGTGGCTCTAGTTGAGGCCAAGGCCATCTTGGATGACCCAGAGCTTCTAGAGTCCTATTTTTGCGGCTTGGATAGCTTCCGTGCT
TTTGAGCAAGAACTTCAACGCACAGGGCTCGACTTTGTGCAGGTTCGCCTGCAAGTTCGGTGTCCTGAAGAATGGGGATGCGTTCTTGATGCCTTCGAGCACTTC
TGGCTGATGCCCGATAGTCGGAGTCTGAGGAACATATCCAGCACCTTCTTTCTCAAGGGTTCAGCTACCCTGATGCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATGTGTGTTGTGATACGAATCAATTTGTGACCAATTACAAAAGCAAAGCAAAGAAGATTCAAGAGGCTTTCATATTACATCTTCAAAGGCTAGCTAATGCA
CACGAGGAGACAAAGATTTCTGAGACCAAAATTCTTTACAATGTTAATTTAATGAGTCAAGAAGAGAATGAAGCAAAGATAGCATGGGAAAAGTTGTCTATTTTG
AAAGATGGCACGGAGTACAAAAAAAGTGTGCAGATTGGTGGACAGGTGCCTTTGCAAATTGCACCTCTTAGAAGCGTAATCCTAGCTTTTCTTGGGAAACTGAGT
TCTACTCTTTCACTACTGCTTTTGGATGCTGTAGAGACTAGGAGGGCCACGTGGTACCTGGACAAACAGCCCGGCTTGGGATCCACTCGACTTGAAACGAAAGAA
CTCGATGCCAGTGCGCCTCAGTTGTCCGACCAGGAAGGACGACGGTTAGAGGTGGTAGGGACGTTGCTCACAGTATGGCTGAACAGAAAGGAGCGCAGTTCCGAC
AATAGCAGGGTGGCTCCACCACCTGTGCCTTCTGGGTGTGTTGCCCAAAGCTATGGAATGCGCTTGTCGTATCAACAGAGTGTGTTGCTAGCTGCAACCCTGTTG
ACTGCTTCCATGGCTCGCCGCCCGTTTGTCAAGCATGTTCCGTCACTGGCCACTAAACAAGACCTTTCAGAGCTTCACACCATTTACCACATCCCTGACTATGTG
TCGATGCGCCTCCCATTTGCGGACGAAAGGATAAATACCCCTCTGCCTGGCTGGGTAAGTTTCTACCCGCAGATGTTCTGGAACAGGGTCAGGCTTCCCCTCTCT
CTTTTTGCCCAGGCGTTCCTGGTTTTCACTAGTGTGGCTCCGACACAACCGGCTCCCAACACATGTGGAGCTTTAATGGCACTGGCCATCCTTTGGCCAGAGTTG
GGAGGAGGTGAAGAGATGACTCTCCCGCTGCTGTCTACTATAACCCTGATGAAGTCTATCAGAGACTTTCCCAGAGTCTCCACGCTTATTACGACGGATGAGAGG
TTTACCGCACATCGTTTGATCGAGAATCCGAATGTCCCGACTAGAGGCAATGATGAGCGTCCCGCCCCCCGTGTGGCTCCAGTAGGTCTTGCGAGGCCACCATCA
ATTTCACCCACAAGACACGAACTCGTAACTTGGCCTCTCTTTCAGATCGGGCAAGCTTCCCCAAGCGGCATGGTCAATAGTGGGAGTGCTACATCGACTAGTGAT
ATAACGTTGACGGTGAGAGAAATTTTGGGTCCGAGCAGAAGAGCGAAAGATTCTGAGGATGCAGTACCGGATGGGGATGAGACCTTCGATGGTCCCGCCTTTGAG
AACACTCGATCGGTGGTCCATTCTCCTCTACATGAGGAGGACGTCACGTGGGCTTGCTTCAACGCCCCGCTAGCCGGTCATTCTCATGCCCTATCCCTGGCCCTG
CGGGATGAGCTTGCGGCTAAGGGGGTTCGGGAGCAGGAGTATCTAGTGAAGGGGAAGCGCATTGCTCGGGAGGATGCATCACGGGTAGAGGAGAAAGCCGCTCGC
CTACGTATAGAGCTAGACTACATCCAGCACGGAGCAGCTTCTGTTGAGGCCTGCATTAATGACTTCAAAGCGGCACATGAGAAGGCCGAGGAGGACCTTGAGATG
ACACGGGTAGAAGTGACTTCTCGGAATAGTCAGATCTCGAGCCTGGAGCAGTGCCTGAAGGAAACTGAAGATAAGTTGCTTAAAGCCGAAGAGGGGCAAGCAATG
GCGGCGGTTGCTTGTTTCGAAGTGGCTCTAGTTGAGGCCAAGGCCATCTTGGATGACCCAGAGCTTCTAGAGTCCTATTTTTGCGGCTTGGATAGCTTCCGTGCT
TTTGAGCAAGAACTTCAACGCACAGGGCTCGACTTTGTGCAGGTTCGCCTGCAAGTTCGGTGTCCTGAAGAATGGGGATGCGTTCTTGATGCCTTCGAGCACTTC
TGGCTGATGCCCGATAGTCGGAGTCTGAGGAACATATCCAGCACCTTCTTTCTCAAGGGTTCAGCTACCCTGATGCTCTAG
Protein sequenceShow/hide protein sequence
MNVCCDTNQFVTNYKSKAKKIQEAFILHLQRLANAHEETKISETKILYNVNLMSQEENEAKIAWEKLSILKDGTEYKKSVQIGGQVPLQIAPLRSVILAFLGKLS
STLSLLLLDAVETRRATWYLDKQPGLGSTRLETKELDASAPQLSDQEGRRLEVVGTLLTVWLNRKERSSDNSRVAPPPVPSGCVAQSYGMRLSYQQSVLLAATLL
TASMARRPFVKHVPSLATKQDLSELHTIYHIPDYVSMRLPFADERINTPLPGWVSFYPQMFWNRVRLPLSLFAQAFLVFTSVAPTQPAPNTCGALMALAILWPEL
GGGEEMTLPLLSTITLMKSIRDFPRVSTLITTDERFTAHRLIENPNVPTRGNDERPAPRVAPVGLARPPSISPTRHELVTWPLFQIGQASPSGMVNSGSATSTSD
ITLTVREILGPSRRAKDSEDAVPDGDETFDGPAFENTRSVVHSPLHEEDVTWACFNAPLAGHSHALSLALRDELAAKGVREQEYLVKGKRIAREDASRVEEKAAR
LRIELDYIQHGAASVEACINDFKAAHEKAEEDLEMTRVEVTSRNSQISSLEQCLKETEDKLLKAEEGQAMAAVACFEVALVEAKAILDDPELLESYFCGLDSFRA
FEQELQRTGLDFVQVRLQVRCPEEWGCVLDAFEHFWLMPDSRSLRNISSTFFLKGSATLML