; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc07g06510 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g06510
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr7:5362338..5363651
RNA-Seq ExpressionMoc07g06510
SyntenyMoc07g06510
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143495.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]1.1e-12890.73Show/hide
Query:  GGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNYKLLIHCFQDSLY
        GGLPAKTDPVGQNAPSNEK EVL+ERLRAIEGTDVFGNIDASQLCLVS LVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQN KLLIHCFQDSL 
Subjt:  GGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNYKLLIHCFQDSLY

Query:  GPASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTDKELSAMFINTLKHPFYDRMIGSASTNF
         PASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEK STESFKEYAQRWRDTAAQVQPPLTDKELS MFINTLKHPFYDRM+GSASTNF
Subjt:  GPASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTDKELSAMFINTLKHPFYDRMIGSASTNF

Query:  SDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGEVQMVGADRHSWKQQPYSR
        SDIM IGERIEYGVRH RITSTADEPLAAKK SHSKKKEGE+  V  D     Q PY R
Subjt:  SDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGEVQMVGADRHSWKQQPYSR

XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]7.6e-19690.96Show/hide
Query:  MPQYTTYNPLYDVPIGQYPHTFVKGAQQIPTNIIFREPEQMMSPPTVLNLGGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGL
        MPQYTTYNPLYDVP+GQY H FVKGAQQIPTNIIFREPEQMMSPPTVLNLG L AKTDPVGQNAPSNEK EVL+ERLRAIE TDVFGNIDASQLC VSGL
Subjt:  MPQYTTYNPLYDVPIGQYPHTFVKGAQQIPTNIIFREPEQMMSPPTVLNLGGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGL

Query:  VIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNYKLLIHCFQDSLYGPASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNST
        VIPPK KVPEFEKY+GSSCPKNHL MYCRKMAAYVQN KLLIHCFQDSL GPASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEK ST
Subjt:  VIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNYKLLIHCFQDSLYGPASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNST

Query:  ESFKEYAQRWRDTAAQVQPPLTDKELSAMFINTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGEVQMVGADRH
        +SFKEYAQRWRDTAAQVQPPL DKELSAMFINTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRH RITST DEPLAAKKASHSKKKEGEVQMVGADRH
Subjt:  ESFKEYAQRWRDTAAQVQPPLTDKELSAMFINTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGEVQMVGADRH

Query:  SWKQQPYSRTPRYTPYYYPTPYGYNQPFMNNATSHYSLYASQNFRPPA---------SQNFQPRGQQHNTFYTQGQ
        SWKQQPY RTP+Y+PYYYPTPYGYNQPF+NNATSHY  YASQNFRPPA         SQNFQPRGQQHNTFYTQGQ
Subjt:  SWKQQPYSRTPRYTPYYYPTPYGYNQPFMNNATSHYSLYASQNFRPPA---------SQNFQPRGQQHNTFYTQGQ

XP_022155098.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia]2.5e-18675.23Show/hide
Query:  MMEDQKAEQEKTRKDIEELREKLDAILLVLEKGKATADPATSSNPIHEPQETPPYPPGY-------GPPLRPVAEGFMPQYTTYNPLYDVPIGQYPHTFV
        M +D+K+EQEKTRKDIEELREKLDAILL LEKGK  A+   +SNPIHEP  TP +PPG+       GP  RP+ EGFM QYTTYNPLYD+P GQ+P   V
Subjt:  MMEDQKAEQEKTRKDIEELREKLDAILLVLEKGKATADPATSSNPIHEPQETPPYPPGY-------GPPLRPVAEGFMPQYTTYNPLYDVPIGQYPHTFV

Query:  KGAQQIPTNIIFREPEQMMSPPTVLNLGGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCPKNH
        +G  Q P  IIF+EPEQ+++PPTVLNLGG  A  DP  Q APS+EKLEVLEERLRA+EGTDVFGNIDASQLCL SGLVIPPKFK+PEFEKY+GSSCPKNH
Subjt:  KGAQQIPTNIIFREPEQMMSPPTVLNLGGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCPKNH

Query:  LIMYCRKMAAYVQNYKLLIHCFQDSLYGPASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTD
        LIMYCRKMAAY+QN KLLIHCFQDSL GP S WYM LDS HV SWKNLADSFLKQYKHNIDM  DRLDLQ MEK + ESFKEY QRWRDTAAQ QPP TD
Subjt:  LIMYCRKMAAYVQNYKLLIHCFQDSLYGPASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTD

Query:  KELSAMFINTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGEVQMVGADRHSWKQQPYSRTPRYTPYYYPTPYG
        KELS+MFINTLKHPFYDRMIGSAST+FSDI+TIGERIEYGV H RITST  E    K  + SKKKEGEVQMVGADRH W+Q PY +T  Y PYYYP+PYG
Subjt:  KELSAMFINTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGEVQMVGADRHSWKQQPYSRTPRYTPYYYPTPYG

Query:  YNQPFMNNATSHYSLYASQNFRPPASQNFQPRGQQHNTFYTQGQ
        YNQP++N AT  Y+  ASQNFRPPASQ FQPRG Q NT YTQGQ
Subjt:  YNQPFMNNATSHYSLYASQNFRPPASQNFQPRGQQHNTFYTQGQ

XP_022157796.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]4.8e-19895.1Show/hide
Query:  MEDQKAEQEKTRKDIEELREKLDAILLVLEKGKATADPATSSNPIHEPQETPPYPPGYGPPLRPVAEGFMPQYTTYNPLYDVPIGQYPHTFVKGAQQIPT
        MEDQKAEQEKTRKDIEELREKLD I L LEKGKATADPATSSNPIHEPQETPPYPPGYGPPLRPVAEGFMPQYTTYNPLYDVPIGQYPHTFVKGAQQIPT
Subjt:  MEDQKAEQEKTRKDIEELREKLDAILLVLEKGKATADPATSSNPIHEPQETPPYPPGYGPPLRPVAEGFMPQYTTYNPLYDVPIGQYPHTFVKGAQQIPT

Query:  NIIFREPEQMMSPPTVLNLGGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKM
        NIIFREPEQMMSPPTV NLGG PAKTDPV QNA S EK EVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKM
Subjt:  NIIFREPEQMMSPPTVLNLGGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKM

Query:  AAYVQNYKLLIHCFQDSLYGPASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTDKELSAMFI
         AYVQN KLLIHCFQDSL G ASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTDKELSAMFI
Subjt:  AAYVQNYKLLIHCFQDSLYGPASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTDKELSAMFI

Query:  NTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGEVQMVGAD
        NTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGE+  V  D
Subjt:  NTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGEVQMVGAD

XP_022158986.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]3.3e-17592.56Show/hide
Query:  MMSPPTVLNLGGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNYKL
        MMSPPTVLNLGGLPAKTD VGQNAPSNEK EVLEERLRAIEGT VFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQN KL
Subjt:  MMSPPTVLNLGGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNYKL

Query:  LIHCFQDSLYGPASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTDKELSAMFINTLKHPFYD
        LIHCFQDSL GPASRWYMQLDSS+VGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEK STESFKEYAQRWRDTAAQVQPPLTDKELSAMFINTLKHPFYD
Subjt:  LIHCFQDSLYGPASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTDKELSAMFINTLKHPFYD

Query:  RMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGEVQMVGADRHSWKQQPYSRTPRYTPYYYPTPYGYNQPFMNNATSHYSLYA
        RMIG+ASTNFSDIMTIGERIEYGVRH RITST DEPLAAKKASHSKKKEGEVQMVGADRHSWKQQPYSRTPRYTPYYYPTPYGYNQPF+NNATSHYS Y 
Subjt:  RMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGEVQMVGADRHSWKQQPYSRTPRYTPYYYPTPYGYNQPFMNNATSHYSLYA

Query:  SQNFRP---------PASQNFQPRGQQHNTFYTQGQ
         QNFRP         PASQNFQPRGQQHNT YTQ Q
Subjt:  SQNFRP---------PASQNFQPRGQQHNTFYTQGQ

TrEMBL top hitse value%identityAlignment
A0A6J1CNY7 Ribonuclease H5.1e-12990.73Show/hide
Query:  GGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNYKLLIHCFQDSLY
        GGLPAKTDPVGQNAPSNEK EVL+ERLRAIEGTDVFGNIDASQLCLVS LVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQN KLLIHCFQDSL 
Subjt:  GGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNYKLLIHCFQDSLY

Query:  GPASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTDKELSAMFINTLKHPFYDRMIGSASTNF
         PASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEK STESFKEYAQRWRDTAAQVQPPLTDKELS MFINTLKHPFYDRM+GSASTNF
Subjt:  GPASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTDKELSAMFINTLKHPFYDRMIGSASTNF

Query:  SDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGEVQMVGADRHSWKQQPYSR
        SDIM IGERIEYGVRH RITSTADEPLAAKK SHSKKKEGE+  V  D     Q PY R
Subjt:  SDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGEVQMVGADRHSWKQQPYSR

A0A6J1D099 Ribonuclease H3.7e-19690.96Show/hide
Query:  MPQYTTYNPLYDVPIGQYPHTFVKGAQQIPTNIIFREPEQMMSPPTVLNLGGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGL
        MPQYTTYNPLYDVP+GQY H FVKGAQQIPTNIIFREPEQMMSPPTVLNLG L AKTDPVGQNAPSNEK EVL+ERLRAIE TDVFGNIDASQLC VSGL
Subjt:  MPQYTTYNPLYDVPIGQYPHTFVKGAQQIPTNIIFREPEQMMSPPTVLNLGGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGL

Query:  VIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNYKLLIHCFQDSLYGPASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNST
        VIPPK KVPEFEKY+GSSCPKNHL MYCRKMAAYVQN KLLIHCFQDSL GPASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEK ST
Subjt:  VIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNYKLLIHCFQDSLYGPASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNST

Query:  ESFKEYAQRWRDTAAQVQPPLTDKELSAMFINTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGEVQMVGADRH
        +SFKEYAQRWRDTAAQVQPPL DKELSAMFINTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRH RITST DEPLAAKKASHSKKKEGEVQMVGADRH
Subjt:  ESFKEYAQRWRDTAAQVQPPLTDKELSAMFINTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGEVQMVGADRH

Query:  SWKQQPYSRTPRYTPYYYPTPYGYNQPFMNNATSHYSLYASQNFRPPA---------SQNFQPRGQQHNTFYTQGQ
        SWKQQPY RTP+Y+PYYYPTPYGYNQPF+NNATSHY  YASQNFRPPA         SQNFQPRGQQHNTFYTQGQ
Subjt:  SWKQQPYSRTPRYTPYYYPTPYGYNQPFMNNATSHYSLYASQNFRPPA---------SQNFQPRGQQHNTFYTQGQ

A0A6J1DM29 LOW QUALITY PROTEIN: uncharacterized protein LOC1110222317.0e-18775.45Show/hide
Query:  MMEDQKAEQEKTRKDIEELREKLDAILLVLEKGKATADPATSSNPIHEPQETPPYPPGY-------GPPLRPVAEGFMPQYTTYNPLYDVPIGQYPHTFV
        M +D+K+EQEKTRKDIEELREKLDAILL LEKGK  A+   +SNPIHEP  TP +PPG+       GP  RP+ EGFM QYTTYNPLYD+P GQ+P   V
Subjt:  MMEDQKAEQEKTRKDIEELREKLDAILLVLEKGKATADPATSSNPIHEPQETPPYPPGY-------GPPLRPVAEGFMPQYTTYNPLYDVPIGQYPHTFV

Query:  KGAQQIPTNIIFREPEQMMSPPTVLNLGGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCPKNH
        +G  Q P  IIF+EPEQ+++PPTVLNLGG  A  DP  Q APS+EKLEVLEERLRA+EGTDVFGNIDASQLCL SGLVIPPKFK+PEFEKYDGSSCPKNH
Subjt:  KGAQQIPTNIIFREPEQMMSPPTVLNLGGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCPKNH

Query:  LIMYCRKMAAYVQNYKLLIHCFQDSLYGPASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTD
        LIMYCRKMAAY+QN KLLIHCFQDSL GP S WYM LDS HV SWKNLADSFLKQYKHNIDM  DRLDLQ MEK + ESFKEY QRWRDTAAQ QPP TD
Subjt:  LIMYCRKMAAYVQNYKLLIHCFQDSLYGPASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTD

Query:  KELSAMFINTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGEVQMVGADRHSWKQQPYSRTPRYTPYYYPTPYG
        KELS+MFINTLKHPFYDRMIGSAST+FSDI+TIGERIEYGV H RITST  E    K  + SKKKEGEVQMVGADRH W+Q PY +T  Y PYYYP+PYG
Subjt:  KELSAMFINTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGEVQMVGADRHSWKQQPYSRTPRYTPYYYPTPYG

Query:  YNQPFMNNATSHYSLYASQNFRPPASQNFQPRGQQHNTFYTQGQ
        YNQP++N AT  Y+  ASQNFRPPASQ FQPRG Q NT YTQGQ
Subjt:  YNQPFMNNATSHYSLYASQNFRPPASQNFQPRGQQHNTFYTQGQ

A0A6J1DZ90 Ribonuclease H2.3e-19895.1Show/hide
Query:  MEDQKAEQEKTRKDIEELREKLDAILLVLEKGKATADPATSSNPIHEPQETPPYPPGYGPPLRPVAEGFMPQYTTYNPLYDVPIGQYPHTFVKGAQQIPT
        MEDQKAEQEKTRKDIEELREKLD I L LEKGKATADPATSSNPIHEPQETPPYPPGYGPPLRPVAEGFMPQYTTYNPLYDVPIGQYPHTFVKGAQQIPT
Subjt:  MEDQKAEQEKTRKDIEELREKLDAILLVLEKGKATADPATSSNPIHEPQETPPYPPGYGPPLRPVAEGFMPQYTTYNPLYDVPIGQYPHTFVKGAQQIPT

Query:  NIIFREPEQMMSPPTVLNLGGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKM
        NIIFREPEQMMSPPTV NLGG PAKTDPV QNA S EK EVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKM
Subjt:  NIIFREPEQMMSPPTVLNLGGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKM

Query:  AAYVQNYKLLIHCFQDSLYGPASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTDKELSAMFI
         AYVQN KLLIHCFQDSL G ASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTDKELSAMFI
Subjt:  AAYVQNYKLLIHCFQDSLYGPASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTDKELSAMFI

Query:  NTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGEVQMVGAD
        NTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGE+  V  D
Subjt:  NTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGEVQMVGAD

A0A6J1E2J7 Ribonuclease H1.6e-17592.56Show/hide
Query:  MMSPPTVLNLGGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNYKL
        MMSPPTVLNLGGLPAKTD VGQNAPSNEK EVLEERLRAIEGT VFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQN KL
Subjt:  MMSPPTVLNLGGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNYKL

Query:  LIHCFQDSLYGPASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTDKELSAMFINTLKHPFYD
        LIHCFQDSL GPASRWYMQLDSS+VGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEK STESFKEYAQRWRDTAAQVQPPLTDKELSAMFINTLKHPFYD
Subjt:  LIHCFQDSLYGPASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTDKELSAMFINTLKHPFYD

Query:  RMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGEVQMVGADRHSWKQQPYSRTPRYTPYYYPTPYGYNQPFMNNATSHYSLYA
        RMIG+ASTNFSDIMTIGERIEYGVRH RITST DEPLAAKKASHSKKKEGEVQMVGADRHSWKQQPYSRTPRYTPYYYPTPYGYNQPF+NNATSHYS Y 
Subjt:  RMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGEVQMVGADRHSWKQQPYSRTPRYTPYYYPTPYGYNQPFMNNATSHYSLYA

Query:  SQNFRP---------PASQNFQPRGQQHNTFYTQGQ
         QNFRP         PASQNFQPRGQQHNT YTQ Q
Subjt:  SQNFRP---------PASQNFQPRGQQHNTFYTQGQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAAGATCAAAAAGCCGAGCAGGAGAAAACAAGGAAAGATATTGAGGAGTTGCGAGAAAAGCTAGATGCCATCCTCCTCGTGTTGGAAAAAGGCAAAGCGACTGC
AGATCCTGCTACATCTAGCAACCCTATCCATGAGCCGCAAGAAACCCCGCCTTATCCACCTGGGTACGGTCCACCTCTTAGGCCAGTGGCAGAGGGTTTCATGCCACAAT
ATACAACGTACAACCCTCTGTATGACGTCCCGATTGGTCAGTATCCGCATACCTTTGTTAAGGGAGCTCAGCAAATCCCAACCAACATCATTTTTCGAGAGCCCGAGCAA
ATGATGTCACCCCCTACAGTCCTTAACCTAGGTGGTCTCCCAGCCAAGACAGACCCAGTCGGACAAAATGCTCCCAGTAACGAGAAGTTAGAAGTTCTGGAGGAAAGATT
AAGAGCAATAGAGGGGACAGACGTTTTTGGCAACATCGATGCCTCACAATTATGCTTGGTGTCTGGATTAGTCATCCCTCCAAAATTCAAGGTGCCAGAGTTTGAGAAGT
ACGATGGTTCTTCTTGTCCTAAGAATCATCTTATAATGTACTGTAGGAAGATGGCAGCGTACGTCCAAAATTACAAATTGTTGATACACTGCTTTCAAGATAGTTTATAT
GGTCCGGCCTCTCGTTGGTACATGCAGTTAGATAGCTCTCATGTTGGCTCGTGGAAGAATCTGGCCGACTCCTTCCTAAAACAATATAAGCATAACATAGACATGGCTCC
AGATCGCTTAGATTTACAGAGGATGGAGAAGAATAGTACAGAGAGCTTTAAGGAGTATGCTCAAAGGTGGAGGGACACGGCAGCTCAAGTCCAACCTCCTTTAACAGATA
AGGAGCTATCTGCCATGTTCATCAATACCCTAAAACATCCTTTCTATGATCGGATGATAGGAAGTGCTTCCACAAATTTCTCTGATATTATGACCATCGGAGAAAGGATC
GAATACGGGGTTAGACATAAGCGAATAACCAGTACTGCCGATGAGCCATTAGCTGCAAAGAAGGCAAGTCATTCCAAGAAGAAGGAAGGTGAGGTGCAAATGGTGGGAGC
AGACCGACATTCTTGGAAGCAACAACCATACAGTCGGACACCGCGATACACTCCGTATTATTACCCAACGCCATACGGGTATAATCAACCATTTATGAATAATGCAACTT
CACATTACTCCCTTTATGCTTCCCAAAATTTTCGACCCCCAGCCAGTCAAAATTTCCAACCTAGGGGTCAGCAGCATAATACATTCTATACTCAAGGACAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGGAAGATCAAAAAGCCGAGCAGGAGAAAACAAGGAAAGATATTGAGGAGTTGCGAGAAAAGCTAGATGCCATCCTCCTCGTGTTGGAAAAAGGCAAAGCGACTGC
AGATCCTGCTACATCTAGCAACCCTATCCATGAGCCGCAAGAAACCCCGCCTTATCCACCTGGGTACGGTCCACCTCTTAGGCCAGTGGCAGAGGGTTTCATGCCACAAT
ATACAACGTACAACCCTCTGTATGACGTCCCGATTGGTCAGTATCCGCATACCTTTGTTAAGGGAGCTCAGCAAATCCCAACCAACATCATTTTTCGAGAGCCCGAGCAA
ATGATGTCACCCCCTACAGTCCTTAACCTAGGTGGTCTCCCAGCCAAGACAGACCCAGTCGGACAAAATGCTCCCAGTAACGAGAAGTTAGAAGTTCTGGAGGAAAGATT
AAGAGCAATAGAGGGGACAGACGTTTTTGGCAACATCGATGCCTCACAATTATGCTTGGTGTCTGGATTAGTCATCCCTCCAAAATTCAAGGTGCCAGAGTTTGAGAAGT
ACGATGGTTCTTCTTGTCCTAAGAATCATCTTATAATGTACTGTAGGAAGATGGCAGCGTACGTCCAAAATTACAAATTGTTGATACACTGCTTTCAAGATAGTTTATAT
GGTCCGGCCTCTCGTTGGTACATGCAGTTAGATAGCTCTCATGTTGGCTCGTGGAAGAATCTGGCCGACTCCTTCCTAAAACAATATAAGCATAACATAGACATGGCTCC
AGATCGCTTAGATTTACAGAGGATGGAGAAGAATAGTACAGAGAGCTTTAAGGAGTATGCTCAAAGGTGGAGGGACACGGCAGCTCAAGTCCAACCTCCTTTAACAGATA
AGGAGCTATCTGCCATGTTCATCAATACCCTAAAACATCCTTTCTATGATCGGATGATAGGAAGTGCTTCCACAAATTTCTCTGATATTATGACCATCGGAGAAAGGATC
GAATACGGGGTTAGACATAAGCGAATAACCAGTACTGCCGATGAGCCATTAGCTGCAAAGAAGGCAAGTCATTCCAAGAAGAAGGAAGGTGAGGTGCAAATGGTGGGAGC
AGACCGACATTCTTGGAAGCAACAACCATACAGTCGGACACCGCGATACACTCCGTATTATTACCCAACGCCATACGGGTATAATCAACCATTTATGAATAATGCAACTT
CACATTACTCCCTTTATGCTTCCCAAAATTTTCGACCCCCAGCCAGTCAAAATTTCCAACCTAGGGGTCAGCAGCATAATACATTCTATACTCAAGGACAGTAG
Protein sequenceShow/hide protein sequence
MMEDQKAEQEKTRKDIEELREKLDAILLVLEKGKATADPATSSNPIHEPQETPPYPPGYGPPLRPVAEGFMPQYTTYNPLYDVPIGQYPHTFVKGAQQIPTNIIFREPEQ
MMSPPTVLNLGGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNYKLLIHCFQDSLY
GPASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTDKELSAMFINTLKHPFYDRMIGSASTNFSDIMTIGERI
EYGVRHKRITSTADEPLAAKKASHSKKKEGEVQMVGADRHSWKQQPYSRTPRYTPYYYPTPYGYNQPFMNNATSHYSLYASQNFRPPASQNFQPRGQQHNTFYTQGQ