; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc07g06540 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g06540
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr7:5377117..5383031
RNA-Seq ExpressionMoc07g06540
SyntenyMoc07g06540
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]1.7e-4756.74Show/hide
Query:  KQHKPPTPNVGKSDHDDRNSEPTSLDKGKPADRPESSEKRHNHKKEGIRPRRTTGSSRLTIHGGDHEREGPSKIQATHGETIRRDDRPSIPSRCLSGMDG
        +QHK P PN GKSDH+DR+SEP SLDKGKPADRPESSEKRHN KK+G                 D E            E + + D P            
Subjt:  KQHKPPTPNVGKSDHDDRNSEPTSLDKGKPADRPESSEKRHNHKKEGIRPRRTTGSSRLTIHGGDHEREGPSKIQATHGETIRRDDRPSIPSRCLSGMDG

Query:  YLRSVGSGQVPGGQCQSRPVAYLLTIKQRTTESLHDYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKKTPSTFSKALSRAQRYMSAGEFFYS
                               +  ++RTTESLHDYV RFN+EKLQVEGLTDAVSLLAF+ GVRDEHLSFSFGK+TPSTFS+ALSRAQRYMSAGEFFYS
Subjt:  YLRSVGSGQVPGGQCQSRPVAYLLTIKQRTTESLHDYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKKTPSTFSKALSRAQRYMSAGEFFYS

Query:  KREPDGKRTDQKRER
        KRE +GKRTDQKRER
Subjt:  KREPDGKRTDQKRER

XP_022145129.1 uncharacterized protein LOC111014646 [Momordica charantia]2.0e-6980.33Show/hide
Query:  EEENRRTEIHASTIGAICGDDLKHPVGGPEDGTSQPSLERQEGLPEAHALTTPDPLQKQFAVLEDKVEGMLQLMTQVLRQFERQESDEVPLVRNPRKGKG
        E   RR++ + S    +  DD +  VGGPEDGTSQP+LERQEGLPEAHALTTP+PLQKQFAVLEDKVEGMLQ MTQVLRQ+ERQESDEVPLVR+PRKGKG
Subjt:  EEENRRTEIHASTIGAICGDDLKHPVGGPEDGTSQPSLERQEGLPEAHALTTPDPLQKQFAVLEDKVEGMLQLMTQVLRQFERQESDEVPLVRNPRKGKG

Query:  PAQSETEESTNSAGSKLRIGGNIRQRTQIFDSQKMKKQHKPPTPNVGKSDHDDRNSEPTSLDKGKPADRPESSEKRHNHKKEG
        PAQSETEESTNSAGSKLRIGGN R+RTQIFDSQKMKKQHK   PN G+SDHDDRNSEP SLDKGKPAD+PESSEKRHN K++G
Subjt:  PAQSETEESTNSAGSKLRIGGNIRQRTQIFDSQKMKKQHKPPTPNVGKSDHDDRNSEPTSLDKGKPADRPESSEKRHNHKKEG

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]4.5e-10161.2Show/hide
Query:  VGGPEDGTSQPSLERQEGLPEAHALTTPDPLQKQFAVLEDKVEGMLQLMTQVLRQFERQESDEVPLVRNPRKGKGPAQSETEESTNSAGSKLRIGGNIRQ
        VGGPEDGTSQP+ ERQEGL E  ALTTP+P QKQFAVLEDK                  ESDEVPLVR+P+KGKGP +S+TEESTNS GSKLRIGGN RQ
Subjt:  VGGPEDGTSQPSLERQEGLPEAHALTTPDPLQKQFAVLEDKVEGMLQLMTQVLRQFERQESDEVPLVRNPRKGKGPAQSETEESTNSAGSKLRIGGNIRQ

Query:  RTQIFDSQKMKKQHKPPTPNVGKSDHDDRNSEPTSLDKGKPADRPESSEKRHNHKKEGIRPRRTTGSSRLTIHGGDHEREGPSKIQATHGETIRRDDRPS
        RT+IFD +K KKQHK P PN GKSDHDDRNSEP SLDKGKPADRPESSEKRH+HK++G         +           + P K +     T+++ D  +
Subjt:  RTQIFDSQKMKKQHKPPTPNVGKSDHDDRNSEPTSLDKGKPADRPESSEKRHNHKKEGIRPRRTTGSSRLTIHGGDHEREGPSKIQATHGETIRRDDRPS

Query:  IPSRCLSG----MDGY----------------------LRSVGSG--------------QVPGGQCQSRPVAYLLTIKQRTTESLHDYVARFNEEKLQVE
         P   L      MD Y                       R +  G              Q  GG+C+SRPVAYLLTIKQRTTESL DYVARFNEEKLQVE
Subjt:  IPSRCLSG----MDGY----------------------LRSVGSG--------------QVPGGQCQSRPVAYLLTIKQRTTESLHDYVARFNEEKLQVE

Query:  GLTDAVSLLAFMSGVRDEHLSFSFGKKTPSTFSKALSRAQRYMSAGEFFYSKREPDGKRTDQKRER
        GLTDAVSLLAFMSGVRDEHLSFSFGK+TP+TFS+ALSRAQRYMSAGEFFYSKREPDGKRTD KRER
Subjt:  GLTDAVSLLAFMSGVRDEHLSFSFGKKTPSTFSKALSRAQRYMSAGEFFYSKREPDGKRTDQKRER

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]6.0e-6157.36Show/hide
Query:  RQRTQIFDSQKMKKQHKPPTPNVGKSDHDDRNSEPTSLDKGKPADRPESSEKRHNHKKEGIRPRRTTGSSRLTIHGGDHEREGPSK-----IQATHGETI
        R+RT+IFDSQK+KKQHK   PN  K+DHD+RNSEP SL+KGKP DRPESSEKRHN K++G       G +           + P K     ++   G T 
Subjt:  RQRTQIFDSQKMKKQHKPPTPNVGKSDHDDRNSEPTSLDKGKPADRPESSEKRHNHKKEGIRPRRTTGSSRLTIHGGDHEREGPSK-----IQATHGETI

Query:  RRDD-----------------RPSIPSRCLSGMDG-YLRSVGSG--------------QVPGGQCQSRPVAYLLTIKQRTTESLHDYVARFNEEKLQVEG
          D                  R  + S  L+G    + R +  G              Q  GG+C+SRPVAYLLTIKQRT ESLHDYVARFNEEKLQ+EG
Subjt:  RRDD-----------------RPSIPSRCLSGMDG-YLRSVGSG--------------QVPGGQCQSRPVAYLLTIKQRTTESLHDYVARFNEEKLQVEG

Query:  LTDAVSLLAFMSGVRDEHLSFSFGKKTPSTFSKALSRAQRYMSAGEFFYSKREPDGKRTDQKRER
        LTDAVSLLAFMSGVRDEHLSFSF K+TPSTFS+ALSRAQRYMSA EF YSKREPDGKRTDQKRER
Subjt:  LTDAVSLLAFMSGVRDEHLSFSFGKKTPSTFSKALSRAQRYMSAGEFFYSKREPDGKRTDQKRER

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]1.2e-4870.97Show/hide
Query:  MDGYLRSVGSGQVP-------------------------------------GGQCQSRPVAYLLTIKQRTTESLHDYVARFNEEKLQVEGLTDAVSLLAF
        MDGYLRSVGSGQVP                                     GG+C+SRPVAYLLTIKQRTTESLHDYVARFN+EKLQ+E LTD VSLLAF
Subjt:  MDGYLRSVGSGQVP-------------------------------------GGQCQSRPVAYLLTIKQRTTESLHDYVARFNEEKLQVEGLTDAVSLLAF

Query:  MSGVRDEHLSFSFGKKTPSTFSKALSRAQRYMSAGEFFYSKREPDGKRTDQKRER
        MSGVRDEHLSFSFGKKTPSTFS+ LSRAQRYMSAGEFFYSKREPDGKRTDQKRER
Subjt:  MSGVRDEHLSFSFGKKTPSTFSKALSRAQRYMSAGEFFYSKREPDGKRTDQKRER

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128058.2e-4856.74Show/hide
Query:  KQHKPPTPNVGKSDHDDRNSEPTSLDKGKPADRPESSEKRHNHKKEGIRPRRTTGSSRLTIHGGDHEREGPSKIQATHGETIRRDDRPSIPSRCLSGMDG
        +QHK P PN GKSDH+DR+SEP SLDKGKPADRPESSEKRHN KK+G                 D E            E + + D P            
Subjt:  KQHKPPTPNVGKSDHDDRNSEPTSLDKGKPADRPESSEKRHNHKKEGIRPRRTTGSSRLTIHGGDHEREGPSKIQATHGETIRRDDRPSIPSRCLSGMDG

Query:  YLRSVGSGQVPGGQCQSRPVAYLLTIKQRTTESLHDYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKKTPSTFSKALSRAQRYMSAGEFFYS
                               +  ++RTTESLHDYV RFN+EKLQVEGLTDAVSLLAF+ GVRDEHLSFSFGK+TPSTFS+ALSRAQRYMSAGEFFYS
Subjt:  YLRSVGSGQVPGGQCQSRPVAYLLTIKQRTTESLHDYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKKTPSTFSKALSRAQRYMSAGEFFYS

Query:  KREPDGKRTDQKRER
        KRE +GKRTDQKRER
Subjt:  KREPDGKRTDQKRER

A0A6J1CUA7 uncharacterized protein LOC1110146469.9e-7080.33Show/hide
Query:  EEENRRTEIHASTIGAICGDDLKHPVGGPEDGTSQPSLERQEGLPEAHALTTPDPLQKQFAVLEDKVEGMLQLMTQVLRQFERQESDEVPLVRNPRKGKG
        E   RR++ + S    +  DD +  VGGPEDGTSQP+LERQEGLPEAHALTTP+PLQKQFAVLEDKVEGMLQ MTQVLRQ+ERQESDEVPLVR+PRKGKG
Subjt:  EEENRRTEIHASTIGAICGDDLKHPVGGPEDGTSQPSLERQEGLPEAHALTTPDPLQKQFAVLEDKVEGMLQLMTQVLRQFERQESDEVPLVRNPRKGKG

Query:  PAQSETEESTNSAGSKLRIGGNIRQRTQIFDSQKMKKQHKPPTPNVGKSDHDDRNSEPTSLDKGKPADRPESSEKRHNHKKEG
        PAQSETEESTNSAGSKLRIGGN R+RTQIFDSQKMKKQHK   PN G+SDHDDRNSEP SLDKGKPAD+PESSEKRHN K++G
Subjt:  PAQSETEESTNSAGSKLRIGGNIRQRTQIFDSQKMKKQHKPPTPNVGKSDHDDRNSEPTSLDKGKPADRPESSEKRHNHKKEG

A0A6J1DWY0 uncharacterized protein LOC1110252932.2e-10161.2Show/hide
Query:  VGGPEDGTSQPSLERQEGLPEAHALTTPDPLQKQFAVLEDKVEGMLQLMTQVLRQFERQESDEVPLVRNPRKGKGPAQSETEESTNSAGSKLRIGGNIRQ
        VGGPEDGTSQP+ ERQEGL E  ALTTP+P QKQFAVLEDK                  ESDEVPLVR+P+KGKGP +S+TEESTNS GSKLRIGGN RQ
Subjt:  VGGPEDGTSQPSLERQEGLPEAHALTTPDPLQKQFAVLEDKVEGMLQLMTQVLRQFERQESDEVPLVRNPRKGKGPAQSETEESTNSAGSKLRIGGNIRQ

Query:  RTQIFDSQKMKKQHKPPTPNVGKSDHDDRNSEPTSLDKGKPADRPESSEKRHNHKKEGIRPRRTTGSSRLTIHGGDHEREGPSKIQATHGETIRRDDRPS
        RT+IFD +K KKQHK P PN GKSDHDDRNSEP SLDKGKPADRPESSEKRH+HK++G         +           + P K +     T+++ D  +
Subjt:  RTQIFDSQKMKKQHKPPTPNVGKSDHDDRNSEPTSLDKGKPADRPESSEKRHNHKKEGIRPRRTTGSSRLTIHGGDHEREGPSKIQATHGETIRRDDRPS

Query:  IPSRCLSG----MDGY----------------------LRSVGSG--------------QVPGGQCQSRPVAYLLTIKQRTTESLHDYVARFNEEKLQVE
         P   L      MD Y                       R +  G              Q  GG+C+SRPVAYLLTIKQRTTESL DYVARFNEEKLQVE
Subjt:  IPSRCLSG----MDGY----------------------LRSVGSG--------------QVPGGQCQSRPVAYLLTIKQRTTESLHDYVARFNEEKLQVE

Query:  GLTDAVSLLAFMSGVRDEHLSFSFGKKTPSTFSKALSRAQRYMSAGEFFYSKREPDGKRTDQKRER
        GLTDAVSLLAFMSGVRDEHLSFSFGK+TP+TFS+ALSRAQRYMSAGEFFYSKREPDGKRTD KRER
Subjt:  GLTDAVSLLAFMSGVRDEHLSFSFGKKTPSTFSKALSRAQRYMSAGEFFYSKREPDGKRTDQKRER

A0A6J1DYL6 uncharacterized protein LOC1110257855.7e-4970.97Show/hide
Query:  MDGYLRSVGSGQVP-------------------------------------GGQCQSRPVAYLLTIKQRTTESLHDYVARFNEEKLQVEGLTDAVSLLAF
        MDGYLRSVGSGQVP                                     GG+C+SRPVAYLLTIKQRTTESLHDYVARFN+EKLQ+E LTD VSLLAF
Subjt:  MDGYLRSVGSGQVP-------------------------------------GGQCQSRPVAYLLTIKQRTTESLHDYVARFNEEKLQVEGLTDAVSLLAF

Query:  MSGVRDEHLSFSFGKKTPSTFSKALSRAQRYMSAGEFFYSKREPDGKRTDQKRER
        MSGVRDEHLSFSFGKKTPSTFS+ LSRAQRYMSAGEFFYSKREPDGKRTDQKRER
Subjt:  MSGVRDEHLSFSFGKKTPSTFSKALSRAQRYMSAGEFFYSKREPDGKRTDQKRER

A0A6J1E1E7 uncharacterized protein LOC1110255482.9e-6157.36Show/hide
Query:  RQRTQIFDSQKMKKQHKPPTPNVGKSDHDDRNSEPTSLDKGKPADRPESSEKRHNHKKEGIRPRRTTGSSRLTIHGGDHEREGPSK-----IQATHGETI
        R+RT+IFDSQK+KKQHK   PN  K+DHD+RNSEP SL+KGKP DRPESSEKRHN K++G       G +           + P K     ++   G T 
Subjt:  RQRTQIFDSQKMKKQHKPPTPNVGKSDHDDRNSEPTSLDKGKPADRPESSEKRHNHKKEGIRPRRTTGSSRLTIHGGDHEREGPSK-----IQATHGETI

Query:  RRDD-----------------RPSIPSRCLSGMDG-YLRSVGSG--------------QVPGGQCQSRPVAYLLTIKQRTTESLHDYVARFNEEKLQVEG
          D                  R  + S  L+G    + R +  G              Q  GG+C+SRPVAYLLTIKQRT ESLHDYVARFNEEKLQ+EG
Subjt:  RRDD-----------------RPSIPSRCLSGMDG-YLRSVGSG--------------QVPGGQCQSRPVAYLLTIKQRTTESLHDYVARFNEEKLQVEG

Query:  LTDAVSLLAFMSGVRDEHLSFSFGKKTPSTFSKALSRAQRYMSAGEFFYSKREPDGKRTDQKRER
        LTDAVSLLAFMSGVRDEHLSFSF K+TPSTFS+ALSRAQRYMSA EF YSKREPDGKRTDQKRER
Subjt:  LTDAVSLLAFMSGVRDEHLSFSFGKKTPSTFSKALSRAQRYMSAGEFFYSKREPDGKRTDQKRER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACCAACAACAAGAGATAAAACAGACTGGGACAACGTAGCATTGATTAGAGTTTACAATGCATGGTCCTGGGAGTGCCACAAGACATGTTTGGGATTGAGCTTTGT
TTATCGCCTTCTTGAATATGCTAATCGGGGCAAACACATGAGCCGTCAATGTAACCAAAGAGATTGTGTGCCTTCAAGATGGAGTCGAGTTGATAACGCCAAAGATTGTA
GTTACTGGAGTCAAGCCGGACAGAAACAAGAGTACAAATATTTGATAGGAAGAGCGTCCCGGATCAACAAGTTTGGTGGGTGCGAGGAGGAGAACCGGAGGACCGAAATC
CACGCATCAACAATTGGCGCCATCTGTGGGGACGATTTAAAGCATCCAGTTGGAGGACCCGAGGATGGGACCAGCCAGCCAAGCCTAGAACGTCAGGAAGGGTTACCCGA
GGCGCATGCACTAACGACCCCTGATCCACTCCAAAAGCAGTTCGCGGTCTTGGAAGACAAGGTAGAGGGCATGCTTCAACTCATGACCCAAGTCCTTCGACAATTCGAGC
GACAAGAGTCCGACGAAGTGCCCCTTGTCAGAAACCCGAGAAAGGGGAAGGGCCCAGCGCAAAGCGAGACTGAGGAGTCAACGAACAGTGCAGGAAGTAAGTTGCGGATA
GGTGGAAATATCAGGCAACGAACCCAGATTTTTGACTCTCAAAAGATGAAAAAGCAACATAAACCCCCGACACCAAATGTGGGCAAGAGCGACCATGATGACAGAAACTC
TGAGCCGACAAGTCTCGACAAAGGCAAACCGGCAGATCGACCAGAGTCCTCGGAGAAGCGACATAACCATAAAAAAGAAGGGATTCGACCTCGAAGAACTACTGGATCAA
GCCGACTCACCATTCACGGAGGAGATCATGAGAGAGAAGGTCCCTCCAAAATTCAAGCTACCCACGGTGAAACAATTCGACGGGACGACCGACCCAGTATACCATCTAGA
TGCTTATCGGGAATGGATGGATATCTACGGAGTGTCGGAAGCGGTCAGGTGCCGGGGGGACAGTGTCAGAGCCGACCTGTGGCTTATCTTTTAACTATTAAACAGAGGAC
GACAGAGAGTCTACACGACTATGTAGCTCGGTTCAACGAGGAGAAGCTACAGGTAGAAGGCCTTACAGACGCTGTATCTCTGCTGGCCTTCATGTCCGGCGTCAGGGATG
AGCATTTATCATTTTCGTTCGGAAAGAAAACACCGAGTACCTTCTCGAAGGCGCTGAGCCGAGCTCAGAGGTACATGAGCGCTGGTGAGTTCTTTTACTCAAAAAGGGAG
CCAGACGGAAAGCGAACCGACCAAAAGAGGGAGAGATTAAAGGAGAACAACGAGTGTTGCGGGAATGCTACTATACCCAATGAAGGGCAACGACATGACTTCTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAACCAACAACAAGAGATAAAACAGACTGGGACAACGTAGCATTGATTAGAGTTTACAATGCATGGTCCTGGGAGTGCCACAAGACATGTTTGGGATTGAGCTTTGT
TTATCGCCTTCTTGAATATGCTAATCGGGGCAAACACATGAGCCGTCAATGTAACCAAAGAGATTGTGTGCCTTCAAGATGGAGTCGAGTTGATAACGCCAAAGATTGTA
GTTACTGGAGTCAAGCCGGACAGAAACAAGAGTACAAATATTTGATAGGAAGAGCGTCCCGGATCAACAAGTTTGGTGGGTGCGAGGAGGAGAACCGGAGGACCGAAATC
CACGCATCAACAATTGGCGCCATCTGTGGGGACGATTTAAAGCATCCAGTTGGAGGACCCGAGGATGGGACCAGCCAGCCAAGCCTAGAACGTCAGGAAGGGTTACCCGA
GGCGCATGCACTAACGACCCCTGATCCACTCCAAAAGCAGTTCGCGGTCTTGGAAGACAAGGTAGAGGGCATGCTTCAACTCATGACCCAAGTCCTTCGACAATTCGAGC
GACAAGAGTCCGACGAAGTGCCCCTTGTCAGAAACCCGAGAAAGGGGAAGGGCCCAGCGCAAAGCGAGACTGAGGAGTCAACGAACAGTGCAGGAAGTAAGTTGCGGATA
GGTGGAAATATCAGGCAACGAACCCAGATTTTTGACTCTCAAAAGATGAAAAAGCAACATAAACCCCCGACACCAAATGTGGGCAAGAGCGACCATGATGACAGAAACTC
TGAGCCGACAAGTCTCGACAAAGGCAAACCGGCAGATCGACCAGAGTCCTCGGAGAAGCGACATAACCATAAAAAAGAAGGGATTCGACCTCGAAGAACTACTGGATCAA
GCCGACTCACCATTCACGGAGGAGATCATGAGAGAGAAGGTCCCTCCAAAATTCAAGCTACCCACGGTGAAACAATTCGACGGGACGACCGACCCAGTATACCATCTAGA
TGCTTATCGGGAATGGATGGATATCTACGGAGTGTCGGAAGCGGTCAGGTGCCGGGGGGACAGTGTCAGAGCCGACCTGTGGCTTATCTTTTAACTATTAAACAGAGGAC
GACAGAGAGTCTACACGACTATGTAGCTCGGTTCAACGAGGAGAAGCTACAGGTAGAAGGCCTTACAGACGCTGTATCTCTGCTGGCCTTCATGTCCGGCGTCAGGGATG
AGCATTTATCATTTTCGTTCGGAAAGAAAACACCGAGTACCTTCTCGAAGGCGCTGAGCCGAGCTCAGAGGTACATGAGCGCTGGTGAGTTCTTTTACTCAAAAAGGGAG
CCAGACGGAAAGCGAACCGACCAAAAGAGGGAGAGATTAAAGGAGAACAACGAGTGTTGCGGGAATGCTACTATACCCAATGAAGGGCAACGACATGACTTCTACTAA
Protein sequenceShow/hide protein sequence
MQPTTRDKTDWDNVALIRVYNAWSWECHKTCLGLSFVYRLLEYANRGKHMSRQCNQRDCVPSRWSRVDNAKDCSYWSQAGQKQEYKYLIGRASRINKFGGCEEENRRTEI
HASTIGAICGDDLKHPVGGPEDGTSQPSLERQEGLPEAHALTTPDPLQKQFAVLEDKVEGMLQLMTQVLRQFERQESDEVPLVRNPRKGKGPAQSETEESTNSAGSKLRI
GGNIRQRTQIFDSQKMKKQHKPPTPNVGKSDHDDRNSEPTSLDKGKPADRPESSEKRHNHKKEGIRPRRTTGSSRLTIHGGDHEREGPSKIQATHGETIRRDDRPSIPSR
CLSGMDGYLRSVGSGQVPGGQCQSRPVAYLLTIKQRTTESLHDYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKKTPSTFSKALSRAQRYMSAGEFFYSKRE
PDGKRTDQKRERLKENNECCGNATIPNEGQRHDFY