CuGenDBv2

Gene ID	Moc07g06560
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Gag/pol protein
Genome location	chr7:5389131..5393241
RNA-Seq Expression	Moc07g06560
Synteny	Moc07g06560
Gene Ontology terms	GO:0006807 - nitrogen compound metabolic process (biological process) GO:0043170 - macromolecule metabolic process (biological process) GO:0044238 - primary metabolic process (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001878 - Zinc finger, CCHC-type IPR036875 - Zinc finger, CCHC-type superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa]

1.3e-108

64.2

Show/hide

Query:  MSTSIIALLAAQRLNGKNYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKEIVDSLQS
        M+++ + +LAA +LNG NY  WK+ +NT+L+IDDLRFVL E+CPQ PA NAT  VR  Y+RW KAN+KA+ YILAS+S+VLAKKHE  +TA+EI+DSLQ 
Subjt:  MSTSIIALLAAQRLNGKNYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKEIVDSLQS

Query:  MFGQPSSQARHEALKFVYNSRMKEGSSVREHVLKLMVHFNVAESNGAVIDEESQISFILESLPKSFLPFRSNAVMNKLEYTLTTLFNELQTYQ-------
        MFGQ S Q +H+ALK++YN+RM EG+SVREHVL +MVHFNVAE NGAVIDE SQ+SFILESLP+SFL FRSNAVMNK+ YTLTTL NELQT++       
Subjt:  MFGQPSSQARHEALKFVYNSRMKEGSSVREHVLKLMVHFNVAESNGAVIDEESQISFILESLPKSFLPFRSNAVMNKLEYTLTTLFNELQTYQ-------

Query:  -----------------------SAPSSSGSKTFKKKKAAGKGSKPDSAAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKKKANEGKYDLLVLET
                               S PSSSG+K +KKKK  G+G+K + AAA    K K A KG CFHCN +GHWKRNCPKYLAEKKKA +GKYDLLVLET
Subjt:  -----------------------SAPSSSGSKTFKKKKAAGKGSKPDSAAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKKKANEGKYDLLVLET

Query:  CLVENDDSAWILDSGVTNHVFSSF
        CLVENDDSAWI+DSG TNHV SSF
Subjt:  CLVENDDSAWILDSGVTNHVFSSF

KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]

1.3e-108

64.2

Show/hide

Query:  MSTSIIALLAAQRLNGKNYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKEIVDSLQS
        M+++ + +LAA +LNG NY  WK+ +NT+L+IDDLRFVL E+CPQ PA NAT  VR  Y+RW KAN+KA+ YILAS+S+VLAKKHE  +TA+EI+DSLQ 
Subjt:  MSTSIIALLAAQRLNGKNYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKEIVDSLQS

Query:  MFGQPSSQARHEALKFVYNSRMKEGSSVREHVLKLMVHFNVAESNGAVIDEESQISFILESLPKSFLPFRSNAVMNKLEYTLTTLFNELQTYQ-------
        MFGQ S Q +H+ALK++YN+RM EG+SVREHVL +MVHFNVAE NGAVIDE SQ+SFILESLP+SFL FRSNAVMNK+ YTLTTL NELQT++       
Subjt:  MFGQPSSQARHEALKFVYNSRMKEGSSVREHVLKLMVHFNVAESNGAVIDEESQISFILESLPKSFLPFRSNAVMNKLEYTLTTLFNELQTYQ-------

Query:  -----------------------SAPSSSGSKTFKKKKAAGKGSKPDSAAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKKKANEGKYDLLVLET
                               S PSSSG+K +KKKK  G+G+K + AAA    K K A KG CFHCN +GHWKRNCPKYLAEKKKA +GKYDLLVLET
Subjt:  -----------------------SAPSSSGSKTFKKKKAAGKGSKPDSAAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKKKANEGKYDLLVLET

Query:  CLVENDDSAWILDSGVTNHVFSSF
        CLVENDDSAWI+DSG TNHV SSF
Subjt:  CLVENDDSAWILDSGVTNHVFSSF

KAA0047792.1 gag/pol protein [Cucumis melo var. makuwa]

1.3e-108

64.2

Show/hide

Query:  MSTSIIALLAAQRLNGKNYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKEIVDSLQS
        M+++ + +LAA +LNG NY  WK+ +NT+L+IDDLRFVL E+CPQ PA NAT  VR  Y+RW KAN+KA+ YILAS+S+VLAKKHE  +TA+EI+DSLQ 
Subjt:  MSTSIIALLAAQRLNGKNYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKEIVDSLQS

Query:  MFGQPSSQARHEALKFVYNSRMKEGSSVREHVLKLMVHFNVAESNGAVIDEESQISFILESLPKSFLPFRSNAVMNKLEYTLTTLFNELQTYQ-------
        MFGQ S Q +H+ALK++YN+RM EG+SVREHVL +MVHFNVAE NGAVIDE SQ+SFILESLP+SFL FRSNAVMNK+ YTLTTL NELQT++       
Subjt:  MFGQPSSQARHEALKFVYNSRMKEGSSVREHVLKLMVHFNVAESNGAVIDEESQISFILESLPKSFLPFRSNAVMNKLEYTLTTLFNELQTYQ-------

Query:  -----------------------SAPSSSGSKTFKKKKAAGKGSKPDSAAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKKKANEGKYDLLVLET
                               S PSSSG+K +KKKK  G+G+K + AAA    K K A KG CFHCN +GHWKRNCPKYLAEKKKA +GKYDLLVLET
Subjt:  -----------------------SAPSSSGSKTFKKKKAAGKGSKPDSAAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKKKANEGKYDLLVLET

Query:  CLVENDDSAWILDSGVTNHVFSSF
        CLVENDDSAWI+DSG TNHV SSF
Subjt:  CLVENDDSAWILDSGVTNHVFSSF

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]

1.3e-108

64.2

Show/hide

Query:  MSTSIIALLAAQRLNGKNYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKEIVDSLQS
        M+++ + +LAA +LNG NY  WK+ +NT+L+IDDLRFVL E+CPQ PA NAT  VR  Y+RW KAN+KA+ YILAS+S+VLAKKHE  +TA+EI+DSLQ 
Subjt:  MSTSIIALLAAQRLNGKNYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKEIVDSLQS

Query:  MFGQPSSQARHEALKFVYNSRMKEGSSVREHVLKLMVHFNVAESNGAVIDEESQISFILESLPKSFLPFRSNAVMNKLEYTLTTLFNELQTYQ-------
        MFGQ S Q +H+ALK++YN+RM EG+SVREHVL +MVHFNVAE NGAVIDE SQ+SFILESLP+SFL FRSNAVMNK+ YTLTTL NELQT++       
Subjt:  MFGQPSSQARHEALKFVYNSRMKEGSSVREHVLKLMVHFNVAESNGAVIDEESQISFILESLPKSFLPFRSNAVMNKLEYTLTTLFNELQTYQ-------

Query:  -----------------------SAPSSSGSKTFKKKKAAGKGSKPDSAAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKKKANEGKYDLLVLET
                               S PSSSG+K +KKKK  G+G+K + AAA    K K A KG CFHCN +GHWKRNCPKYLAEKKKA +GKYDLLVLET
Subjt:  -----------------------SAPSSSGSKTFKKKKAAGKGSKPDSAAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKKKANEGKYDLLVLET

Query:  CLVENDDSAWILDSGVTNHVFSSF
        CLVENDDSAWI+DSG TNHV SSF
Subjt:  CLVENDDSAWILDSGVTNHVFSSF

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]

1.3e-108

64.2

Show/hide

Query:  MSTSIIALLAAQRLNGKNYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKEIVDSLQS
        M+++ + +LAA +LNG NY  WK+ +NT+L+IDDLRFVL E+CPQ PA NAT  VR  Y+RW KAN+KA+ YILAS+S+VLAKKHE  +TA+EI+DSLQ 
Subjt:  MSTSIIALLAAQRLNGKNYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKEIVDSLQS

Query:  MFGQPSSQARHEALKFVYNSRMKEGSSVREHVLKLMVHFNVAESNGAVIDEESQISFILESLPKSFLPFRSNAVMNKLEYTLTTLFNELQTYQ-------
        MFGQ S Q +H+ALK++YN+RM EG+SVREHVL +MVHFNVAE NGAVIDE SQ+SFILESLP+SFL FRSNAVMNK+ YTLTTL NELQT++       
Subjt:  MFGQPSSQARHEALKFVYNSRMKEGSSVREHVLKLMVHFNVAESNGAVIDEESQISFILESLPKSFLPFRSNAVMNKLEYTLTTLFNELQTYQ-------

Query:  -----------------------SAPSSSGSKTFKKKKAAGKGSKPDSAAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKKKANEGKYDLLVLET
                               S PSSSG+K +KKKK  G+G+K + AAA    K K A KG CFHCN +GHWKRNCPKYLAEKKKA +GKYDLLVLET
Subjt:  -----------------------SAPSSSGSKTFKKKKAAGKGSKPDSAAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKKKANEGKYDLLVLET

Query:  CLVENDDSAWILDSGVTNHVFSSF
        CLVENDDSAWI+DSG TNHV SSF
Subjt:  CLVENDDSAWILDSGVTNHVFSSF

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SMH8 Gag/pol protein

6.4e-109

64.2

Show/hide

Query:  MSTSIIALLAAQRLNGKNYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKEIVDSLQS
        M+++ + +LAA +LNG NY  WK+ +NT+L+IDDLRFVL E+CPQ PA NAT  VR  Y+RW KAN+KA+ YILAS+S+VLAKKHE  +TA+EI+DSLQ 
Subjt:  MSTSIIALLAAQRLNGKNYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKEIVDSLQS

Query:  MFGQPSSQARHEALKFVYNSRMKEGSSVREHVLKLMVHFNVAESNGAVIDEESQISFILESLPKSFLPFRSNAVMNKLEYTLTTLFNELQTYQ-------
        MFGQ S Q +H+ALK++YN+RM EG+SVREHVL +MVHFNVAE NGAVIDE SQ+SFILESLP+SFL FRSNAVMNK+ YTLTTL NELQT++       
Subjt:  MFGQPSSQARHEALKFVYNSRMKEGSSVREHVLKLMVHFNVAESNGAVIDEESQISFILESLPKSFLPFRSNAVMNKLEYTLTTLFNELQTYQ-------

Query:  -----------------------SAPSSSGSKTFKKKKAAGKGSKPDSAAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKKKANEGKYDLLVLET
                               S PSSSG+K +KKKK  G+G+K + AAA    K K A KG CFHCN +GHWKRNCPKYLAEKKKA +GKYDLLVLET
Subjt:  -----------------------SAPSSSGSKTFKKKKAAGKGSKPDSAAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKKKANEGKYDLLVLET

Query:  CLVENDDSAWILDSGVTNHVFSSF
        CLVENDDSAWI+DSG TNHV SSF
Subjt:  CLVENDDSAWILDSGVTNHVFSSF

A0A5A7TU93 Gag/pol protein

6.4e-109

64.2

Show/hide

Query:  MSTSIIALLAAQRLNGKNYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKEIVDSLQS
        M+++ + +LAA +LNG NY  WK+ +NT+L+IDDLRFVL E+CPQ PA NAT  VR  Y+RW KAN+KA+ YILAS+S+VLAKKHE  +TA+EI+DSLQ 
Subjt:  MSTSIIALLAAQRLNGKNYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKEIVDSLQS

Query:  MFGQPSSQARHEALKFVYNSRMKEGSSVREHVLKLMVHFNVAESNGAVIDEESQISFILESLPKSFLPFRSNAVMNKLEYTLTTLFNELQTYQ-------
        MFGQ S Q +H+ALK++YN+RM EG+SVREHVL +MVHFNVAE NGAVIDE SQ+SFILESLP+SFL FRSNAVMNK+ YTLTTL NELQT++       
Subjt:  MFGQPSSQARHEALKFVYNSRMKEGSSVREHVLKLMVHFNVAESNGAVIDEESQISFILESLPKSFLPFRSNAVMNKLEYTLTTLFNELQTYQ-------

Query:  -----------------------SAPSSSGSKTFKKKKAAGKGSKPDSAAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKKKANEGKYDLLVLET
                               S PSSSG+K +KKKK  G+G+K + AAA    K K A KG CFHCN +GHWKRNCPKYLAEKKKA +GKYDLLVLET
Subjt:  -----------------------SAPSSSGSKTFKKKKAAGKGSKPDSAAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKKKANEGKYDLLVLET

Query:  CLVENDDSAWILDSGVTNHVFSSF
        CLVENDDSAWI+DSG TNHV SSF
Subjt:  CLVENDDSAWILDSGVTNHVFSSF

A0A5A7TWB9 Gag/pol protein

6.4e-109

64.2

Show/hide

Query:  MSTSIIALLAAQRLNGKNYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKEIVDSLQS
        M+++ + +LAA +LNG NY  WK+ +NT+L+IDDLRFVL E+CPQ PA NAT  VR  Y+RW KAN+KA+ YILAS+S+VLAKKHE  +TA+EI+DSLQ 
Subjt:  MSTSIIALLAAQRLNGKNYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKEIVDSLQS

Query:  MFGQPSSQARHEALKFVYNSRMKEGSSVREHVLKLMVHFNVAESNGAVIDEESQISFILESLPKSFLPFRSNAVMNKLEYTLTTLFNELQTYQ-------
        MFGQ S Q +H+ALK++YN+RM EG+SVREHVL +MVHFNVAE NGAVIDE SQ+SFILESLP+SFL FRSNAVMNK+ YTLTTL NELQT++       
Subjt:  MFGQPSSQARHEALKFVYNSRMKEGSSVREHVLKLMVHFNVAESNGAVIDEESQISFILESLPKSFLPFRSNAVMNKLEYTLTTLFNELQTYQ-------

Query:  -----------------------SAPSSSGSKTFKKKKAAGKGSKPDSAAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKKKANEGKYDLLVLET
                               S PSSSG+K +KKKK  G+G+K + AAA    K K A KG CFHCN +GHWKRNCPKYLAEKKKA +GKYDLLVLET
Subjt:  -----------------------SAPSSSGSKTFKKKKAAGKGSKPDSAAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKKKANEGKYDLLVLET

Query:  CLVENDDSAWILDSGVTNHVFSSF
        CLVENDDSAWI+DSG TNHV SSF
Subjt:  CLVENDDSAWILDSGVTNHVFSSF

A0A5D3CPJ6 Gag/pol protein

6.4e-109

64.2

Show/hide

Query:  MSTSIIALLAAQRLNGKNYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKEIVDSLQS
        M+++ + +LAA +LNG NY  WK+ +NT+L+IDDLRFVL E+CPQ PA NAT  VR  Y+RW KAN+KA+ YILAS+S+VLAKKHE  +TA+EI+DSLQ 
Subjt:  MSTSIIALLAAQRLNGKNYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKEIVDSLQS

Query:  MFGQPSSQARHEALKFVYNSRMKEGSSVREHVLKLMVHFNVAESNGAVIDEESQISFILESLPKSFLPFRSNAVMNKLEYTLTTLFNELQTYQ-------
        MFGQ S Q +H+ALK++YN+RM EG+SVREHVL +MVHFNVAE NGAVIDE SQ+SFILESLP+SFL FRSNAVMNK+ YTLTTL NELQT++       
Subjt:  MFGQPSSQARHEALKFVYNSRMKEGSSVREHVLKLMVHFNVAESNGAVIDEESQISFILESLPKSFLPFRSNAVMNKLEYTLTTLFNELQTYQ-------

Query:  -----------------------SAPSSSGSKTFKKKKAAGKGSKPDSAAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKKKANEGKYDLLVLET
                               S PSSSG+K +KKKK  G+G+K + AAA    K K A KG CFHCN +GHWKRNCPKYLAEKKKA +GKYDLLVLET
Subjt:  -----------------------SAPSSSGSKTFKKKKAAGKGSKPDSAAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKKKANEGKYDLLVLET

Query:  CLVENDDSAWILDSGVTNHVFSSF
        CLVENDDSAWI+DSG TNHV SSF
Subjt:  CLVENDDSAWILDSGVTNHVFSSF

A0A5D3CSZ6 Gag/pol protein

6.4e-109

64.2

Show/hide

Query:  MSTSIIALLAAQRLNGKNYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKEIVDSLQS
        M+++ + +LAA +LNG NY  WK+ +NT+L+IDDLRFVL E+CPQ PA NAT  VR  Y+RW KAN+KA+ YILAS+S+VLAKKHE  +TA+EI+DSLQ 
Subjt:  MSTSIIALLAAQRLNGKNYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKEIVDSLQS

Query:  MFGQPSSQARHEALKFVYNSRMKEGSSVREHVLKLMVHFNVAESNGAVIDEESQISFILESLPKSFLPFRSNAVMNKLEYTLTTLFNELQTYQ-------
        MFGQ S Q +H+ALK++YN+RM EG+SVREHVL +MVHFNVAE NGAVIDE SQ+SFILESLP+SFL FRSNAVMNK+ YTLTTL NELQT++       
Subjt:  MFGQPSSQARHEALKFVYNSRMKEGSSVREHVLKLMVHFNVAESNGAVIDEESQISFILESLPKSFLPFRSNAVMNKLEYTLTTLFNELQTYQ-------

Query:  -----------------------SAPSSSGSKTFKKKKAAGKGSKPDSAAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKKKANEGKYDLLVLET
                               S PSSSG+K +KKKK  G+G+K + AAA    K K A KG CFHCN +GHWKRNCPKYLAEKKKA +GKYDLLVLET
Subjt:  -----------------------SAPSSSGSKTFKKKKAAGKGSKPDSAAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKKKANEGKYDLLVLET

Query:  CLVENDDSAWILDSGVTNHVFSSF
        CLVENDDSAWI+DSG TNHV SSF
Subjt:  CLVENDDSAWILDSGVTNHVFSSF

SwissProt top hits

e value

%identity

Alignment

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

1.0e-07

21.52

Show/hide

Query:  RLNGKN-YKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKEIVDSLQSMFGQPSSQARH
        + NG N +  W+  +  +L+   L  VL  D  +     A        + W   +++A   I   +SD +     D  TA+ I   L+S++   +   + 
Subjt:  RLNGKN-YKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKEIVDSLQSMFGQPSSQARH

Query:  EALKFVYNSRMKEGSSVREHVLKLMVHFNVAESNGAVIDEESQISFILESLPKSFLPFRSNAVMNKLEYTLTTLFNEL---QTYQSAPSSSGSKTFKKKK
           K +Y   M EG++   H+           + G  I+EE +   +L SLP S+    +  +  K    L  + + L   +  +  P + G     + +
Subjt:  EALKFVYNSRMKEGSSVREHVLKLMVHFNVAESNGAVIDEESQISFILESLPKSFLPFRSNAVMNKLEYTLTTLFNEL---QTYQSAPSSSGSKTFKKKK

Query:  AAG-KGSKPDSAAAAQKGKVKVAEKGK---CFHCNMDGHWKRNCPKYLAEKKKANEGKYD-------------LLVL---ETCL-VENDDSAWILDSGVT
            + S  +   +  +GK K   K +   C++CN  GH+KR+CP     K + +  K D             +L +   E C+ +   +S W++D+  +
Subjt:  AAG-KGSKPDSAAAAQKGKVKVAEKGK---CFHCNMDGHWKRNCPKYLAEKKKANEGKYD-------------LLVL---ETCL-VENDDSAWILDSGVT

Query:  NH
        +H
Subjt:  NH

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCGCAACAAAAGCTTGATTCGAGGCGTCAGCAAAACACTGCCGTCTGTTCCAAAAACAAAAGCCCCGAAGCATATAGATCCGTAAATCGCTTTCTTGAGCTTGCATA
CCAAGTTAGGATTCCTAGGTGCTACCACAAGCACGATCCCGAGACCCAAGAGGATAGCGAGGAAGATTCGGTGGTGGTGTTCGAGGGGAATTCACTGAAGAGACGTTCTT
CAAAGGGCCCGGTGTTTTGGGCATTAAGTTTCTGCATTGTTTCTGTAAGTCCGAGTCGCTCGAAAGTCGTTCGTGGCATCGGATTGGTCGAAAAGTTGCAGAAAACAGCG
AAGAAGACGAAGCAGACTGCGCAGACAGCGCCATGGCGCTATGCAGCAGCGCCATGGCGCTGCGGGACAGCACACAGCGCCACGGCGCTGCACTGTAACGCCGCGGCGCT
GTGCAGCGCCATGGCGCCATGCCAGGGCACCACGGCGCTGCGCTTAGGCGCCGAGGCGCTGTCCCGGGTGTTTTCGACACGGTTCCTAGGCTTCGATTCATGCATGTCTA
CTTCAATTATTGCACTCTTAGCCGCGCAAAGACTTAATGGCAAAAATTACAAACAATGGAAGTCAAACCTAAACACTATTCTCGTGATAGATGATCTTAGGTTCGTCTTG
CAAGAGGATTGTCCTCAAGCTCCTGCGCCTAACGCCACTGTGGTGGTGCGCAACGCCTATGACAGGTGGATCAAGGCCAATGACAAGGCCAAGGTCTACATCTTGGCGAG
CATATCTGATGTGCTTGCCAAGAAGCACGAGGACACGGTCACCGCTAAGGAGATCGTGGACTCGCTGCAGAGCATGTTTGGACAACCGTCCTCACAGGCTCGACATGAAG
CCCTTAAGTTCGTTTACAACTCCCGTATGAAGGAGGGTTCATCAGTGCGAGAACACGTTCTCAAGCTGATGGTCCACTTCAACGTGGCTGAGTCGAACGGGGCCGTCATA
GACGAGGAGAGTCAGATCAGCTTCATTCTGGAATCTCTTCCGAAGAGTTTCCTGCCATTCCGCAGCAATGCGGTTATGAATAAGCTGGAGTACACTCTTACCACGCTCTT
TAACGAGCTGCAGACCTACCAGTCTGCGCCCTCTTCTTCTGGAAGTAAGACTTTTAAGAAGAAGAAGGCTGCTGGTAAGGGGTCTAAACCTGACTCAGCTGCTGCTGCCC
AGAAAGGCAAGGTCAAGGTTGCAGAGAAAGGAAAGTGTTTCCACTGCAACATGGACGGGCATTGGAAGCGCAACTGCCCAAAGTACTTGGCCGAAAAGAAGAAAGCCAAC
GAAGGTAAATATGATTTACTTGTATTGGAAACATGTTTAGTGGAGAATGATGACTCCGCCTGGATACTGGATTCAGGAGTCACTAATCACGTTTTTTCTTCATTTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSQQKLDSRRQQNTAVCSKNKSPEAYRSVNRFLELAYQVRIPRCYHKHDPETQEDSEEDSVVVFEGNSLKRRSSKGPVFWALSFCIVSVSPSRSKVVRGIGLVEKLQKTA
KKTKQTAQTAPWRYAAAPWRCGTAHSATALHCNAAALCSAMAPCQGTTALRLGAEALSRVFSTRFLGFDSCMSTSIIALLAAQRLNGKNYKQWKSNLNTILVIDDLRFVL
QEDCPQAPAPNATVVVRNAYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKEIVDSLQSMFGQPSSQARHEALKFVYNSRMKEGSSVREHVLKLMVHFNVAESNGAVI
DEESQISFILESLPKSFLPFRSNAVMNKLEYTLTTLFNELQTYQSAPSSSGSKTFKKKKAAGKGSKPDSAAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKKKAN
EGKYDLLVLETCLVENDDSAWILDSGVTNHVFSSF

Moc07g06560 (gene) of Bitter gourd (OHB3-1) v2 genome