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Moc07g06700 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g06700
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr7:5478759..5481464
RNA-Seq ExpressionMoc07g06700
SyntenyMoc07g06700
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ06416.1 hypothetical protein Acr_18g0005860 [Actinidia rufa]1.1e-0640Show/hide
Query:  SVASEYNGEENISVGSDHSLPIIRTGRGILHTSSSKFALSNLLHDKSTGKILFQGPSINDLYPLH
        +V     G++ + +G+   LP+  +G+G+L T+   F LSNLLHD  T ++L QGP +  L+PLH
Subjt:  SVASEYNGEENISVGSDHSLPIIRTGRGILHTSSSKFALSNLLHDKSTGKILFQGPSINDLYPLH

KAG7626496.1 Reverse transcriptase RNA-dependent DNA polymerase [Arabidopsis thaliana x Arabidopsis arenosa]8.6e-0730.5Show/hide
Query:  LASQNSSQCRVFPTSNGFSPNFSRSRGHLGHGKHSGNQGRGFNFERVSRNFPGRGNSGGRSSSFSQMDNRISCQICGHLGHYAL----------------
        LAS N+    V P    +S    + RG+  +G+  GNQG+G N+    R FP +  SG  SS     +NRI CQICG  GH AL                
Subjt:  LASQNSSQCRVFPTSNGFSPNFSRSRGHLGHGKHSGNQGRGFNFERVSRNFPGRGNSGGRSSSFSQMDNRISCQICGHLGHYAL----------------

Query:  ------------------------------DYLSNLSVASEYNGEENISVGSDHSLPIIRTGRGILHTSSSKFALSNLLHDKSTGKILFQGPSINDLYPL
                                      +   NL  +  Y G + + VG+   LPI  TG  IL  SS    L+++L   +T K+L QG + N LY L
Subjt:  ------------------------------DYLSNLSVASEYNGEENISVGSDHSLPIIRTGRGILHTSSSKFALSNLLHDKSTGKILFQGPSINDLYPL

XP_022150845.1 uncharacterized protein LOC111018892 [Momordica charantia]2.2e-1038.38Show/hide
Query:  MISEEYALEKLIKRVDLPTHTTTLLASQNSSQCRVFPTSNGFSPNFSRSRGHLGHGKHSGNQGRG-FNFERVSRNFPGRGNSGGRSSSFSQMDNRISCQI
        M SEE A+EK +KR DL T    L AS   SQ R    ++ F PN S  R   G GK   N GRG  NF     N  GRG S G   +  Q DNR  CQI
Subjt:  MISEEYALEKLIKRVDLPTHTTTLLASQNSSQCRVFPTSNGFSPNFSRSRGHLGHGKHSGNQGRG-FNFERVSRNFPGRGNSGGRSSSFSQMDNRISCQI

Query:  CGHLGHYALDY----------------------------------------------------LSNL---SVASEYNGEENISVGSDHSLPIIRTGRG
        CG LGH ALD                                                     LSNL   S+AS+YNGEENISVGS  S PI   G G
Subjt:  CGHLGHYALDY----------------------------------------------------LSNL---SVASEYNGEENISVGSDHSLPIIRTGRG

XP_022153147.1 probable serine/threonine-protein kinase PBL11 [Momordica charantia]2.3e-1256.38Show/hide
Query:  LEYLLDNEIERIFHKRRREQRRQQVEAEQMDQQPRNPNLEVQNPAVEGNNRGEVAILEAIPPLNAVMLADDRERGIRAYVAPVFHGFDLIIAEP
        LEYLLDNEIE  F +R REQRRQQVE   MDQ PR P     NP V      EV +  A P LN ++LADD ER IRAY A V H F  +IA P
Subjt:  LEYLLDNEIERIFHKRRREQRRQQVEAEQMDQQPRNPNLEVQNPAVEGNNRGEVAILEAIPPLNAVMLADDRERGIRAYVAPVFHGFDLIIAEP

XP_022158490.1 uncharacterized protein LOC111024970 [Momordica charantia]1.4e-0958.46Show/hide
Query:  MDQQPRNPNLEVQNPAVEGNNRGEVAILEAIPPLNAVMLADDRERGIRAYVAPVFHGFDLIIAEP
        MDQ PR P     NP VEG N GEV +L A PPLN ++L DD ER IRAY AP  HGF  +IA P
Subjt:  MDQQPRNPNLEVQNPAVEGNNRGEVAILEAIPPLNAVMLADDRERGIRAYVAPVFHGFDLIIAEP

TrEMBL top hitse value%identityAlignment
A0A2N9EJC7 Uncharacterized protein7.6e-0937.59Show/hide
Query:  HSGNQGRGFNFERVSRNFPG----RGNSGGRSSSFSQMDNRISCQICGHLGHYAL--------DYLSNLSV---------ASEYNGEENISVGSDHSLPI
        H G  GR  N  + SR   G    RG + GR S  S   +R +CQ+CG LGH AL         Y S+ ++          S+   +ENI VG+   LPI
Subjt:  HSGNQGRGFNFERVSRNFPG----RGNSGGRSSSFSQMDNRISCQICGHLGHYAL--------DYLSNLSV---------ASEYNGEENISVGSDHSLPI

Query:  IRTGRGILHTSSSKFALSNLLHDKSTGKILFQGPSINDLYP
           G   + T SS F L+++LHD++TG+ L  G S N LYP
Subjt:  IRTGRGILHTSSSKFALSNLLHDKSTGKILFQGPSINDLYP

A0A2N9IV19 Uncharacterized protein1.7e-0833.33Show/hide
Query:  FPTSNGFSPNFSRSRGHLGHGKHSGNQGRG---FNFERVSRNFPGRGNSGGRSSSFSQMD-NRISCQICGHLGHYALD-----------YLSNLSVASEY
        F + + F  N S++R   G G+++  +GRG    N +    N P + +S     + ++ D +R  CQICG LGH ALD            L+NL+V + Y
Subjt:  FPTSNGFSPNFSRSRGHLGHGKHSGNQGRG---FNFERVSRNFPGRGNSGGRSSSFSQMD-NRISCQICGHLGHYALD-----------YLSNLSVASEY

Query:  NGEENISVGSDHSLPIIRTG---RGILHTSSSKFALSN--LLHDKSTGKILFQGPSINDLYPLHS
         G + ++VG+  S+PI  TG   +     + S +  SN  L+ D  +GK+L++G S N LYP+H+
Subjt:  NGEENISVGSDHSLPIIRTG---RGILHTSSSKFALSN--LLHDKSTGKILFQGPSINDLYPLHS

A0A6J1D9L6 uncharacterized protein LOC1110188921.1e-1038.38Show/hide
Query:  MISEEYALEKLIKRVDLPTHTTTLLASQNSSQCRVFPTSNGFSPNFSRSRGHLGHGKHSGNQGRG-FNFERVSRNFPGRGNSGGRSSSFSQMDNRISCQI
        M SEE A+EK +KR DL T    L AS   SQ R    ++ F PN S  R   G GK   N GRG  NF     N  GRG S G   +  Q DNR  CQI
Subjt:  MISEEYALEKLIKRVDLPTHTTTLLASQNSSQCRVFPTSNGFSPNFSRSRGHLGHGKHSGNQGRG-FNFERVSRNFPGRGNSGGRSSSFSQMDNRISCQI

Query:  CGHLGHYALDY----------------------------------------------------LSNL---SVASEYNGEENISVGSDHSLPIIRTGRG
        CG LGH ALD                                                     LSNL   S+AS+YNGEENISVGS  S PI   G G
Subjt:  CGHLGHYALDY----------------------------------------------------LSNL---SVASEYNGEENISVGSDHSLPIIRTGRG

A0A6J1DI54 probable serine/threonine-protein kinase PBL111.1e-1256.38Show/hide
Query:  LEYLLDNEIERIFHKRRREQRRQQVEAEQMDQQPRNPNLEVQNPAVEGNNRGEVAILEAIPPLNAVMLADDRERGIRAYVAPVFHGFDLIIAEP
        LEYLLDNEIE  F +R REQRRQQVE   MDQ PR P     NP V      EV +  A P LN ++LADD ER IRAY A V H F  +IA P
Subjt:  LEYLLDNEIERIFHKRRREQRRQQVEAEQMDQQPRNPNLEVQNPAVEGNNRGEVAILEAIPPLNAVMLADDRERGIRAYVAPVFHGFDLIIAEP

A0A6J1DVZ9 uncharacterized protein LOC1110249706.8e-1058.46Show/hide
Query:  MDQQPRNPNLEVQNPAVEGNNRGEVAILEAIPPLNAVMLADDRERGIRAYVAPVFHGFDLIIAEP
        MDQ PR P     NP VEG N GEV +L A PPLN ++L DD ER IRAY AP  HGF  +IA P
Subjt:  MDQQPRNPNLEVQNPAVEGNNRGEVAILEAIPPLNAVMLADDRERGIRAYVAPVFHGFDLIIAEP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATCGGAGGAATATGCTTTGGAGAAATTAATCAAACGCGTGGATCTTCCCACTCATACTACTACTTTACTGGCCTCTCAAAATTCGTCTCAATGTCGTGTG
TTTCCAACTTCAAATGGATTTAGCCCTAATTTTTCCCGCAGTAGAGGACATCTAGGTCATGGTAAACATTCTGGCAATCAGGGTCGTGGCTTTAATTTCGAGCGT
GTTTCTAGGAATTTTCCAGGCCGTGGTAATTCTGGTGGGCGTTCTTCCAGTTTTTCACAGATGGATAATCGTATCTCATGTCAGATTTGTGGCCATCTTGGACAT
TATGCTCTTGACTATTTGTCCAATTTGTCCGTGGCATCTGAATATAATGGCGAGGAGAATATTTCTGTTGGCAGTGATCATTCTCTTCCCATAATTCGTACAGGT
CGTGGCATTCTTCACACCTCTTCCTCTAAATTTGCCCTATCCAATTTACTTCATGACAAGTCCACAGGCAAGATTTTATTCCAAGGCCCTAGCATCAATGACCTT
TATCCTCTTCATTCTCTGGCTGCTCTGTCATCCACAGAATTGGAATATCTACTTGACAACGAGATAGAACGCATCTTCCATAAAAGAAGAAGAGAACAACGTAGA
CAGCAAGTAGAGGCTGAGCAAATGGATCAACAACCAAGAAATCCTAACCTAGAGGTTCAAAATCCAGCAGTTGAAGGAAATAATAGGGGAGAGGTAGCTATTCTA
GAAGCTATTCCTCCTCTTAATGCCGTTATGTTAGCTGATGATAGAGAAAGGGGAATTAGAGCATATGTTGCTCCTGTATTTCATGGCTTCGATCTGATTATTGCA
GAACCATAA
mRNA sequenceShow/hide mRNA sequence
ATGATATCGGAGGAATATGCTTTGGAGAAATTAATCAAACGCGTGGATCTTCCCACTCATACTACTACTTTACTGGCCTCTCAAAATTCGTCTCAATGTCGTGTG
TTTCCAACTTCAAATGGATTTAGCCCTAATTTTTCCCGCAGTAGAGGACATCTAGGTCATGGTAAACATTCTGGCAATCAGGGTCGTGGCTTTAATTTCGAGCGT
GTTTCTAGGAATTTTCCAGGCCGTGGTAATTCTGGTGGGCGTTCTTCCAGTTTTTCACAGATGGATAATCGTATCTCATGTCAGATTTGTGGCCATCTTGGACAT
TATGCTCTTGACTATTTGTCCAATTTGTCCGTGGCATCTGAATATAATGGCGAGGAGAATATTTCTGTTGGCAGTGATCATTCTCTTCCCATAATTCGTACAGGT
CGTGGCATTCTTCACACCTCTTCCTCTAAATTTGCCCTATCCAATTTACTTCATGACAAGTCCACAGGCAAGATTTTATTCCAAGGCCCTAGCATCAATGACCTT
TATCCTCTTCATTCTCTGGCTGCTCTGTCATCCACAGAATTGGAATATCTACTTGACAACGAGATAGAACGCATCTTCCATAAAAGAAGAAGAGAACAACGTAGA
CAGCAAGTAGAGGCTGAGCAAATGGATCAACAACCAAGAAATCCTAACCTAGAGGTTCAAAATCCAGCAGTTGAAGGAAATAATAGGGGAGAGGTAGCTATTCTA
GAAGCTATTCCTCCTCTTAATGCCGTTATGTTAGCTGATGATAGAGAAAGGGGAATTAGAGCATATGTTGCTCCTGTATTTCATGGCTTCGATCTGATTATTGCA
GAACCATAA
Protein sequenceShow/hide protein sequence
MISEEYALEKLIKRVDLPTHTTTLLASQNSSQCRVFPTSNGFSPNFSRSRGHLGHGKHSGNQGRGFNFERVSRNFPGRGNSGGRSSSFSQMDNRISCQICGHLGH
YALDYLSNLSVASEYNGEENISVGSDHSLPIIRTGRGILHTSSSKFALSNLLHDKSTGKILFQGPSINDLYPLHSLAALSSTELEYLLDNEIERIFHKRRREQRR
QQVEAEQMDQQPRNPNLEVQNPAVEGNNRGEVAILEAIPPLNAVMLADDRERGIRAYVAPVFHGFDLIIAEP