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Moc07g08700 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g08700
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr7:6765411..6771913
RNA-Seq ExpressionMoc07g08700
SyntenyMoc07g08700
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW36370.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]3.2e-0656.14Show/hide
Query:  GYTFLDDQNKKIIRSKNVIFNEKVLYKDRNKVDSGKTELDGSIKKIQYISPLEVVES
        GY F D+QN+KIIRS+NVIFNE+V+YKDR+ V S  TE+D   KK ++++  E++ES
Subjt:  GYTFLDDQNKKIIRSKNVIFNEKVLYKDRNKVDSGKTELDGSIKKIQYISPLEVVES

RVW40577.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]4.1e-0656.14Show/hide
Query:  GYTFLDDQNKKIIRSKNVIFNEKVLYKDRNKVDSGKTELDGSIKKIQYISPLEVVES
        GY F D+QN+KIIRS+NVIFNE+V+YKDR+ V S  TE+D   KK ++++  E+ ES
Subjt:  GYTFLDDQNKKIIRSKNVIFNEKVLYKDRNKVDSGKTELDGSIKKIQYISPLEVVES

RVX00796.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]1.9e-0657.89Show/hide
Query:  GYTFLDDQNKKIIRSKNVIFNEKVLYKDRNKVDSGKTELDGSIKKIQYISPLEVVES
        GY F D+QNKKIIRS+NVIFNE+V+YKDR+ V S  TE+D   KK ++++  E+ ES
Subjt:  GYTFLDDQNKKIIRSKNVIFNEKVLYKDRNKVDSGKTELDGSIKKIQYISPLEVVES

RVX11927.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]3.2e-0656.14Show/hide
Query:  GYTFLDDQNKKIIRSKNVIFNEKVLYKDRNKVDSGKTELDGSIKKIQYISPLEVVES
        GY F D+QN+KIIRS+NVIFNE+++YKDR+ V S  TELD   KK ++++  E+ ES
Subjt:  GYTFLDDQNKKIIRSKNVIFNEKVLYKDRNKVDSGKTELDGSIKKIQYISPLEVVES

RVX13004.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]4.1e-0656.14Show/hide
Query:  GYTFLDDQNKKIIRSKNVIFNEKVLYKDRNKVDSGKTELDGSIKKIQYISPLEVVES
        GY F D+QN+KIIRS+NVIFNE+V+YKDR+ V S  TE+D   KK ++++  E+ ES
Subjt:  GYTFLDDQNKKIIRSKNVIFNEKVLYKDRNKVDSGKTELDGSIKKIQYISPLEVVES

TrEMBL top hitse value%identityAlignment
A0A438DLP3 Retrovirus-related Pol polyprotein from transposon TNT 1-941.5e-0656.14Show/hide
Query:  GYTFLDDQNKKIIRSKNVIFNEKVLYKDRNKVDSGKTELDGSIKKIQYISPLEVVES
        GY F D+QN+KIIRS+NVIFNE+V+YKDR+ V S  TE+D   KK ++++  E++ES
Subjt:  GYTFLDDQNKKIIRSKNVIFNEKVLYKDRNKVDSGKTELDGSIKKIQYISPLEVVES

A0A438HDD3 Retrovirus-related Pol polyprotein from transposon TNT 1-942.0e-0656.14Show/hide
Query:  GYTFLDDQNKKIIRSKNVIFNEKVLYKDRNKVDSGKTELDGSIKKIQYISPLEVVES
        GY F D+QN+KIIRS+NVIFNE+V+YKDR+ V S  TE+D   KK ++++  E+ ES
Subjt:  GYTFLDDQNKKIIRSKNVIFNEKVLYKDRNKVDSGKTELDGSIKKIQYISPLEVVES

A0A438IVY1 Retrovirus-related Pol polyprotein from transposon TNT 1-949.0e-0757.89Show/hide
Query:  GYTFLDDQNKKIIRSKNVIFNEKVLYKDRNKVDSGKTELDGSIKKIQYISPLEVVES
        GY F D+QNKKIIRS+NVIFNE+V+YKDR+ V S  TE+D   KK ++++  E+ ES
Subjt:  GYTFLDDQNKKIIRSKNVIFNEKVLYKDRNKVDSGKTELDGSIKKIQYISPLEVVES

A0A438JSJ2 Retrovirus-related Pol polyprotein from transposon TNT 1-941.5e-0656.14Show/hide
Query:  GYTFLDDQNKKIIRSKNVIFNEKVLYKDRNKVDSGKTELDGSIKKIQYISPLEVVES
        GY F D+QN+KIIRS+NVIFNE+++YKDR+ V S  TELD   KK ++++  E+ ES
Subjt:  GYTFLDDQNKKIIRSKNVIFNEKVLYKDRNKVDSGKTELDGSIKKIQYISPLEVVES

A5CBM1 Uncharacterized protein2.0e-0656.14Show/hide
Query:  GYTFLDDQNKKIIRSKNVIFNEKVLYKDRNKVDSGKTELDGSIKKIQYISPLEVVES
        GY F D+QN+KIIRS+NVIFNE+V+YKDR+ V S  TE+D   KK ++++  E+ ES
Subjt:  GYTFLDDQNKKIIRSKNVIFNEKVLYKDRNKVDSGKTELDGSIKKIQYISPLEVVES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAACCGAGAGGGTAAAGTCTTCTACAGATACTCAACCAATCTTGGAAGTATCTGAACCGCAGCAACAAAATACCCTTACAAGTGTCATCCCCGGAAGGATGGTAAC
CGAGAGGGTAAAAACTTCTGCGAATACTCAACTAATCCTAAGAGTACCTGAACTACAACAAAATACCCTCACAAGCGTCATCCCCGAAAGGATAGTCACCAATAGGATAG
TAGATTATCTACATTCCAAGGAATTGGAATTGTCATTAAACAAAAAGTCAGCTGACGTGGAAGAAGCCAAATGGAAAAACTTGGACAAGAAGGTGTTGGGACATCTGAGG
AGGAACTGCAAAGCCCCAATGAAAGCTGAAGGGAAAGAAGCTGGTGCAAATGTTGTTGCTGAAGAAATACATGATGCTCTAGTTCTTGTAGTTGAAGGTTATACATTTTT
GGATGACCAAAACAAGAAGATTATCAGAAGCAAGAACGTGATCTTCAATGAGAAAGTCTTATACAAAGACAGAAATAAAGTTGATTCAGGAAAGACAGAGTTAGATGGAA
GCATAAAGAAAATTCAGTATATAAGTCCTCTTGAGGTTGTGGAATCTGATGAACCAGTTGTGGAAACTGATGAGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAACCGAGAGGGTAAAGTCTTCTACAGATACTCAACCAATCTTGGAAGTATCTGAACCGCAGCAACAAAATACCCTTACAAGTGTCATCCCCGGAAGGATGGTAAC
CGAGAGGGTAAAAACTTCTGCGAATACTCAACTAATCCTAAGAGTACCTGAACTACAACAAAATACCCTCACAAGCGTCATCCCCGAAAGGATAGTCACCAATAGGATAG
TAGATTATCTACATTCCAAGGAATTGGAATTGTCATTAAACAAAAAGTCAGCTGACGTGGAAGAAGCCAAATGGAAAAACTTGGACAAGAAGGTGTTGGGACATCTGAGG
AGGAACTGCAAAGCCCCAATGAAAGCTGAAGGGAAAGAAGCTGGTGCAAATGTTGTTGCTGAAGAAATACATGATGCTCTAGTTCTTGTAGTTGAAGGTTATACATTTTT
GGATGACCAAAACAAGAAGATTATCAGAAGCAAGAACGTGATCTTCAATGAGAAAGTCTTATACAAAGACAGAAATAAAGTTGATTCAGGAAAGACAGAGTTAGATGGAA
GCATAAAGAAAATTCAGTATATAAGTCCTCTTGAGGTTGTGGAATCTGATGAACCAGTTGTGGAAACTGATGAGGTTTAG
Protein sequenceShow/hide protein sequence
MVTERVKSSTDTQPILEVSEPQQQNTLTSVIPGRMVTERVKTSANTQLILRVPELQQNTLTSVIPERIVTNRIVDYLHSKELELSLNKKSADVEEAKWKNLDKKVLGHLR
RNCKAPMKAEGKEAGANVVAEEIHDALVLVVEGYTFLDDQNKKIIRSKNVIFNEKVLYKDRNKVDSGKTELDGSIKKIQYISPLEVVESDEPVVETDEV