; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc07g08770 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g08770
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr7:6825526..6826401
RNA-Seq ExpressionMoc07g08770
SyntenyMoc07g08770
Gene Ontology termsGO:0071897 - DNA biosynthetic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0034061 - DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_017979699.1 PREDICTED: uncharacterized protein LOC108662712 [Theobroma cacao]2.7e-2353.85Show/hide
Query:  AYDPQLRLPTLPDNHSSRRQLKRESFHPIPISYTELLSQLFQGNLLAPVPVESLQPPYPKWYDPQVHCDYHVVAVGHSTENCTSLKHKVQVLMKAGWLKF
        A+D Q      P     +  L+R  F PIP+SYT LL QL +  LLA  P++ L+PP+PKWYDP  HCDYH    GHSTENCT+LKHKVQ L+KAG L F
Subjt:  AYDPQLRLPTLPDNHSSRRQLKRESFHPIPISYTELLSQLFQGNLLAPVPVESLQPPYPKWYDPQVHCDYHVVAVGHSTENCTSLKHKVQVLMKAGWLKF

Query:  STED
        + +D
Subjt:  STED

XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]5.0e-2560Show/hide
Query:  SSRRQLKRESFHPIPISYTELLSQLFQGNLLAPVPVESLQPPYPKWYDPQVHCDYHVVAVGHSTENCTSLKHKVQVLMKAGWLKFSTEDG
        ++R   K+  F PIP++YTELL QLFQ N LAPVPV+ +QPPYP+WYD    CDYH  A+ HSTENCT LK++VQ L+KAGW  F  E+G
Subjt:  SSRRQLKRESFHPIPISYTELLSQLFQGNLLAPVPVESLQPPYPKWYDPQVHCDYHVVAVGHSTENCTSLKHKVQVLMKAGWLKFSTEDG

XP_022153553.1 uncharacterized protein LOC111021029 [Momordica charantia]3.4e-5860.89Show/hide
Query:  MRQDIDMIQGQVTEIFNVLKNIVTVGDISQPNNLVEPHDNSSPRVDPSICQPTEGFSLHYLSHEAQLSKKGQQAPTICQVEFTLQDGQTSKAIHS----G
        MRQDID IQ QV +I NVLKNIVTVG  SQPNNLVEP++NSSPRVDP +CQ  EGF  H  SH+AQLSKKGQQ PT CQVEFT +D QT K  +S    G
Subjt:  MRQDIDMIQGQVTEIFNVLKNIVTVGDISQPNNLVEPHDNSSPRVDPSICQPTEGFSLHYLSHEAQLSKKGQQAPTICQVEFTLQDGQTSKAIHS----G

Query:  KEKEKVTNGDAEETTGKEYAQRWGKAIEQLSMPLINKEPHSETNRSFVKRKNKV---------------EAYDP----------QLRLPTLPDNHSSRRQ
        +EKE VT             QRWGKAIEQL +PLINKEPH + N+S +KRKNKV                AY P          Q    TLP+NHSSRRQ
Subjt:  KEKEKVTNGDAEETTGKEYAQRWGKAIEQLSMPLINKEPHSETNRSFVKRKNKV---------------EAYDP----------QLRLPTLPDNHSSRRQ

Query:  LKRESFHPIPISYTELLSQLFQGNL
        LKRESFH IP SYTELLSQLFQGNL
Subjt:  LKRESFHPIPISYTELLSQLFQGNL

XP_022155098.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia]1.4e-2458.16Show/hide
Query:  DNHSSRRQLKRESFHPIPISYTELLSQLFQGNLLAPVPVESLQPPYPKWYDPQVHCDYHVVAVGHSTENCTSLKHKVQVLMKAGWLKFSTEDGQHMKH
        +N S+R+Q     F PIP++YTELL QLFQ N LAPVPV+ +QPPYP WYD    CDYH  A+GHSTENCT+LK++VQ L+KAG L F  E+   +K+
Subjt:  DNHSSRRQLKRESFHPIPISYTELLSQLFQGNLLAPVPVESLQPPYPKWYDPQVHCDYHVVAVGHSTENCTSLKHKVQVLMKAGWLKFSTEDGQHMKH

XP_022158986.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]6.9e-2760.22Show/hide
Query:  DNHSSRRQLKRESFHPIPISYTELLSQLFQGNLLAPVPVESLQPPYPKWYDPQVHCDYHVVAVGHSTENCTSLKHKVQVLMKAGWLKFSTEDG
        +  ++R   K+  F PIP++YTELL QLFQ N LAPVPV+ +QPPYP+WYD    CDYH  A+GHSTENCT+LK++VQ L+KAGWL F  E+G
Subjt:  DNHSSRRQLKRESFHPIPISYTELLSQLFQGNLLAPVPVESLQPPYPKWYDPQVHCDYHVVAVGHSTENCTSLKHKVQVLMKAGWLKFSTEDG

TrEMBL top hitse value%identityAlignment
A0A061FBD9 Uncharacterized protein5.0e-2358.62Show/hide
Query:  KRESFHPIPISYTELLSQLFQGNLLAPVPVESLQPPYPKWYDPQVHCDYHVVAVGHSTENCTSLKHKVQVLMKAGWLKFSTEDGQHM
        +R  F PIP+ YT LL QL +  LLA  P+E L+PP+PKWYDP  HCDYH    GHSTENCT+LKHKVQ L+KAG L F+ +D  ++
Subjt:  KRESFHPIPISYTELLSQLFQGNLLAPVPVESLQPPYPKWYDPQVHCDYHVVAVGHSTENCTSLKHKVQVLMKAGWLKFSTEDGQHM

A0A6J1D099 Ribonuclease H2.4e-2560Show/hide
Query:  SSRRQLKRESFHPIPISYTELLSQLFQGNLLAPVPVESLQPPYPKWYDPQVHCDYHVVAVGHSTENCTSLKHKVQVLMKAGWLKFSTEDG
        ++R   K+  F PIP++YTELL QLFQ N LAPVPV+ +QPPYP+WYD    CDYH  A+ HSTENCT LK++VQ L+KAGW  F  E+G
Subjt:  SSRRQLKRESFHPIPISYTELLSQLFQGNLLAPVPVESLQPPYPKWYDPQVHCDYHVVAVGHSTENCTSLKHKVQVLMKAGWLKFSTEDG

A0A6J1DHS7 uncharacterized protein LOC1110210291.6e-5860.89Show/hide
Query:  MRQDIDMIQGQVTEIFNVLKNIVTVGDISQPNNLVEPHDNSSPRVDPSICQPTEGFSLHYLSHEAQLSKKGQQAPTICQVEFTLQDGQTSKAIHS----G
        MRQDID IQ QV +I NVLKNIVTVG  SQPNNLVEP++NSSPRVDP +CQ  EGF  H  SH+AQLSKKGQQ PT CQVEFT +D QT K  +S    G
Subjt:  MRQDIDMIQGQVTEIFNVLKNIVTVGDISQPNNLVEPHDNSSPRVDPSICQPTEGFSLHYLSHEAQLSKKGQQAPTICQVEFTLQDGQTSKAIHS----G

Query:  KEKEKVTNGDAEETTGKEYAQRWGKAIEQLSMPLINKEPHSETNRSFVKRKNKV---------------EAYDP----------QLRLPTLPDNHSSRRQ
        +EKE VT             QRWGKAIEQL +PLINKEPH + N+S +KRKNKV                AY P          Q    TLP+NHSSRRQ
Subjt:  KEKEKVTNGDAEETTGKEYAQRWGKAIEQLSMPLINKEPHSETNRSFVKRKNKV---------------EAYDP----------QLRLPTLPDNHSSRRQ

Query:  LKRESFHPIPISYTELLSQLFQGNL
        LKRESFH IP SYTELLSQLFQGNL
Subjt:  LKRESFHPIPISYTELLSQLFQGNL

A0A6J1DM29 LOW QUALITY PROTEIN: uncharacterized protein LOC1110222317.0e-2558.16Show/hide
Query:  DNHSSRRQLKRESFHPIPISYTELLSQLFQGNLLAPVPVESLQPPYPKWYDPQVHCDYHVVAVGHSTENCTSLKHKVQVLMKAGWLKFSTEDGQHMKH
        +N S+R+Q     F PIP++YTELL QLFQ N LAPVPV+ +QPPYP WYD    CDYH  A+GHSTENCT+LK++VQ L+KAG L F  E+   +K+
Subjt:  DNHSSRRQLKRESFHPIPISYTELLSQLFQGNLLAPVPVESLQPPYPKWYDPQVHCDYHVVAVGHSTENCTSLKHKVQVLMKAGWLKFSTEDGQHMKH

A0A6J1E2J7 Ribonuclease H3.3e-2760.22Show/hide
Query:  DNHSSRRQLKRESFHPIPISYTELLSQLFQGNLLAPVPVESLQPPYPKWYDPQVHCDYHVVAVGHSTENCTSLKHKVQVLMKAGWLKFSTEDG
        +  ++R   K+  F PIP++YTELL QLFQ N LAPVPV+ +QPPYP+WYD    CDYH  A+GHSTENCT+LK++VQ L+KAGWL F  E+G
Subjt:  DNHSSRRQLKRESFHPIPISYTELLSQLFQGNLLAPVPVESLQPPYPKWYDPQVHCDYHVVAVGHSTENCTSLKHKVQVLMKAGWLKFSTEDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACAGGACATCGATATGATTCAGGGGCAAGTCACAGAAATTTTCAATGTCTTAAAGAATATTGTTACAGTTGGGGACATTTCTCAACCTAACAATTTAGTC
GAACCTCATGATAATTCATCACCTAGGGTGGACCCATCTATTTGTCAGCCAACAGAGGGTTTCTCCCTGCATTATTTGTCACATGAAGCTCAACTGTCCAAGAAA
GGCCAACAAGCTCCTACAATATGTCAAGTTGAATTTACACTCCAAGATGGACAAACATCAAAGGCCATTCACTCAGGTAAAGAAAAAGAAAAGGTTACCAATGGA
GATGCTGAAGAAACTACAGGAAAAGAATATGCTCAAAGATGGGGAAAAGCAATAGAACAACTGTCAATGCCATTAATTAATAAAGAGCCACATTCTGAAACGAAT
AGAAGCTTTGTTAAAAGGAAAAATAAAGTCGAGGCATATGACCCACAACTAAGGTTGCCAACATTACCAGATAATCATAGTAGTAGGAGGCAACTAAAGCGAGAG
AGCTTTCATCCGATCCCAATATCCTACACTGAGTTGTTATCCCAATTATTTCAAGGTAATCTATTAGCTCCCGTACCCGTAGAGTCATTGCAACCACCTTATCCA
AAGTGGTACGACCCGCAAGTCCACTGTGATTACCATGTAGTAGCTGTAGGTCATTCAACTGAGAACTGTACTTCACTAAAGCATAAAGTGCAAGTTCTAATGAAG
GCAGGATGGCTAAAGTTTTCAACGGAAGATGGTCAACACATGAAGCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGACAGGACATCGATATGATTCAGGGGCAAGTCACAGAAATTTTCAATGTCTTAAAGAATATTGTTACAGTTGGGGACATTTCTCAACCTAACAATTTAGTC
GAACCTCATGATAATTCATCACCTAGGGTGGACCCATCTATTTGTCAGCCAACAGAGGGTTTCTCCCTGCATTATTTGTCACATGAAGCTCAACTGTCCAAGAAA
GGCCAACAAGCTCCTACAATATGTCAAGTTGAATTTACACTCCAAGATGGACAAACATCAAAGGCCATTCACTCAGGTAAAGAAAAAGAAAAGGTTACCAATGGA
GATGCTGAAGAAACTACAGGAAAAGAATATGCTCAAAGATGGGGAAAAGCAATAGAACAACTGTCAATGCCATTAATTAATAAAGAGCCACATTCTGAAACGAAT
AGAAGCTTTGTTAAAAGGAAAAATAAAGTCGAGGCATATGACCCACAACTAAGGTTGCCAACATTACCAGATAATCATAGTAGTAGGAGGCAACTAAAGCGAGAG
AGCTTTCATCCGATCCCAATATCCTACACTGAGTTGTTATCCCAATTATTTCAAGGTAATCTATTAGCTCCCGTACCCGTAGAGTCATTGCAACCACCTTATCCA
AAGTGGTACGACCCGCAAGTCCACTGTGATTACCATGTAGTAGCTGTAGGTCATTCAACTGAGAACTGTACTTCACTAAAGCATAAAGTGCAAGTTCTAATGAAG
GCAGGATGGCTAAAGTTTTCAACGGAAGATGGTCAACACATGAAGCACTAG
Protein sequenceShow/hide protein sequence
MRQDIDMIQGQVTEIFNVLKNIVTVGDISQPNNLVEPHDNSSPRVDPSICQPTEGFSLHYLSHEAQLSKKGQQAPTICQVEFTLQDGQTSKAIHSGKEKEKVTNG
DAEETTGKEYAQRWGKAIEQLSMPLINKEPHSETNRSFVKRKNKVEAYDPQLRLPTLPDNHSSRRQLKRESFHPIPISYTELLSQLFQGNLLAPVPVESLQPPYP
KWYDPQVHCDYHVVAVGHSTENCTSLKHKVQVLMKAGWLKFSTEDGQHMKH