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Moc07g09170 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g09170
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRNase H domain-containing protein
Genome locationchr7:7050236..7051059
RNA-Seq ExpressionMoc07g09170
SyntenyMoc07g09170
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4394811.1 hypothetical protein F8388_015717 [Cannabis sativa]1.2e-0526.67Show/hide
Query:  GLGWVLQNWEGAIILAGNKSVDHPSSIKALEAMAVLEGIRAKNYLVTFPIQVESDS------------------------------------VEVDRVAN
        G+G++ +NWEG II AG   +    +++  EA  ++E I+      T PI+++SD                                     + V R  N
Subjt:  GLGWVLQNWEGAIILAGNKSVDHPSSIKALEAMAVLEGIRAKNYLVTFPIQVESDS------------------------------------VEVDRVAN

Query:  YCAHHLARRALKNRESEMWDFSLPNWLEVVAIMDL
         CA+ LAR++L +R ++++D S P+WL      DL
Subjt:  YCAHHLARRALKNRESEMWDFSLPNWLEVVAIMDL

KAF4399153.1 hypothetical protein G4B88_023747 [Cannabis sativa]4.7e-0525.93Show/hide
Query:  GLGWVLQNWEGAIILAGNKSVDHPSSIKALEAMAVLEGIRAKNYLVTFPIQVESDS------------------------------------VEVDRVAN
        G G++ ++WEG ++LAG        S++  EA A+LE ++ + +     I+++SD                                     V V R  N
Subjt:  GLGWVLQNWEGAIILAGNKSVDHPSSIKALEAMAVLEGIRAKNYLVTFPIQVESDS------------------------------------VEVDRVAN

Query:  YCAHHLARRALKNRESEMWDFSLPNWLEVVAIMDL
         CAH LAR+ L  +E+ ++  S P WL +    DL
Subjt:  YCAHHLARRALKNRESEMWDFSLPNWLEVVAIMDL

KAF4403043.1 hypothetical protein G4B88_010495 [Cannabis sativa]1.2e-0526.67Show/hide
Query:  GLGWVLQNWEGAIILAGNKSVDHPSSIKALEAMAVLEGIRAKNYLVTFPIQVESDS------------------------------------VEVDRVAN
        G+G++ +NWEG II AG   +    +++  EA  ++E I+      T PI+++SD                                     + V R  N
Subjt:  GLGWVLQNWEGAIILAGNKSVDHPSSIKALEAMAVLEGIRAKNYLVTFPIQVESDS------------------------------------VEVDRVAN

Query:  YCAHHLARRALKNRESEMWDFSLPNWLEVVAIMDL
         CA+ LAR++L +R ++++D S P+WL      DL
Subjt:  YCAHHLARRALKNRESEMWDFSLPNWLEVVAIMDL

XP_022143317.1 uncharacterized protein LOC111013216 [Momordica charantia]1.6e-0543.08Show/hide
Query:  QTGGLGWVLQNWEGAIILAGNKSVDHPSSIKALEAMAVLEGIRAKNYLVTFPIQVESDSVEVDRV
        + GG+GW+L +  G I+LAGN  +     I ALE M ++ G++  N     PI +ESDSVEV R+
Subjt:  QTGGLGWVLQNWEGAIILAGNKSVDHPSSIKALEAMAVLEGIRAKNYLVTFPIQVESDSVEVDRV

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]3.6e-1335.34Show/hide
Query:  GGLGWVLQNWEGAIILAGNKSVDHPSSIKALEAMAVLEGIR-AKNYLVTFPIQVESDSVEVD------------------------------------RV
        GG+GW++++W+G I+LAGN+ V+  +++K LEA A+LEG+R   N  V  P+ +E+DS EV+                                    R 
Subjt:  GGLGWVLQNWEGAIILAGNKSVDHPSSIKALEAMAVLEGIR-AKNYLVTFPIQVESDSVEVD------------------------------------RV

Query:  ANYCAHHLARRALKNRESEMWDFSLPNWLEVVA
         N CAH LA+RA   RES +W    PNWL ++A
Subjt:  ANYCAHHLARRALKNRESEMWDFSLPNWLEVVA

TrEMBL top hitse value%identityAlignment
A0A6J1CQG0 uncharacterized protein LOC1110132167.9e-0643.08Show/hide
Query:  QTGGLGWVLQNWEGAIILAGNKSVDHPSSIKALEAMAVLEGIRAKNYLVTFPIQVESDSVEVDRV
        + GG+GW+L +  G I+LAGN  +     I ALE M ++ G++  N     PI +ESDSVEV R+
Subjt:  QTGGLGWVLQNWEGAIILAGNKSVDHPSSIKALEAMAVLEGIRAKNYLVTFPIQVESDSVEVDRV

A0A6J1DNV9 uncharacterized protein LOC1110224031.7e-1335.34Show/hide
Query:  GGLGWVLQNWEGAIILAGNKSVDHPSSIKALEAMAVLEGIR-AKNYLVTFPIQVESDSVEVD------------------------------------RV
        GG+GW++++W+G I+LAGN+ V+  +++K LEA A+LEG+R   N  V  P+ +E+DS EV+                                    R 
Subjt:  GGLGWVLQNWEGAIILAGNKSVDHPSSIKALEAMAVLEGIR-AKNYLVTFPIQVESDSVEVD------------------------------------RV

Query:  ANYCAHHLARRALKNRESEMWDFSLPNWLEVVA
         N CAH LA+RA   RES +W    PNWL ++A
Subjt:  ANYCAHHLARRALKNRESEMWDFSLPNWLEVVA

A0A7J6HIL6 RNase H domain-containing protein6.0e-0626.67Show/hide
Query:  GLGWVLQNWEGAIILAGNKSVDHPSSIKALEAMAVLEGIRAKNYLVTFPIQVESDS------------------------------------VEVDRVAN
        G+G++ +NWEG II AG   +    +++  EA  ++E I+      T PI+++SD                                     + V R  N
Subjt:  GLGWVLQNWEGAIILAGNKSVDHPSSIKALEAMAVLEGIRAKNYLVTFPIQVESDS------------------------------------VEVDRVAN

Query:  YCAHHLARRALKNRESEMWDFSLPNWLEVVAIMDL
         CA+ LAR++L +R ++++D S P+WL      DL
Subjt:  YCAHHLARRALKNRESEMWDFSLPNWLEVVAIMDL

A0A7J6HVA4 Uncharacterized protein2.3e-0525.93Show/hide
Query:  GLGWVLQNWEGAIILAGNKSVDHPSSIKALEAMAVLEGIRAKNYLVTFPIQVESDS------------------------------------VEVDRVAN
        G G++ ++WEG ++LAG        S++  EA A+LE ++ + +     I+++SD                                     V V R  N
Subjt:  GLGWVLQNWEGAIILAGNKSVDHPSSIKALEAMAVLEGIRAKNYLVTFPIQVESDS------------------------------------VEVDRVAN

Query:  YCAHHLARRALKNRESEMWDFSLPNWLEVVAIMDL
         CAH LAR+ L  +E+ ++  S P WL +    DL
Subjt:  YCAHHLARRALKNRESEMWDFSLPNWLEVVAIMDL

A0A7J6I674 RNase H domain-containing protein6.0e-0626.67Show/hide
Query:  GLGWVLQNWEGAIILAGNKSVDHPSSIKALEAMAVLEGIRAKNYLVTFPIQVESDS------------------------------------VEVDRVAN
        G+G++ +NWEG II AG   +    +++  EA  ++E I+      T PI+++SD                                     + V R  N
Subjt:  GLGWVLQNWEGAIILAGNKSVDHPSSIKALEAMAVLEGIRAKNYLVTFPIQVESDS------------------------------------VEVDRVAN

Query:  YCAHHLARRALKNRESEMWDFSLPNWLEVVAIMDL
         CA+ LAR++L +R ++++D S P+WL      DL
Subjt:  YCAHHLARRALKNRESEMWDFSLPNWLEVVAIMDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCGATAATCACGCCGCCGACAGTAATTCGCATCGGCCCCCACCGAACTTCCCGGTAGTTCATCAGACGGGCGGTCTCGGCTGGGTGCTTCAGAACTGGGAGGGCGC
AATTATTCTTGCAGGGAACAAATCAGTGGACCACCCTAGTAGCATCAAGGCGTTGGAAGCCATGGCCGTTCTTGAAGGGATTCGGGCGAAGAACTATCTTGTAACTTTTC
CAATCCAAGTGGAATCTGATTCCGTAGAGGTTGATCGGGTTGCGAACTACTGTGCCCATCACCTTGCGCGTCGTGCTTTAAAGAATAGGGAGAGTGAAATGTGGGATTTT
TCACTCCCCAATTGGCTGGAAGTTGTGGCCATTATGGACCTTTCGGTTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCGATAATCACGCCGCCGACAGTAATTCGCATCGGCCCCCACCGAACTTCCCGGTAGTTCATCAGACGGGCGGTCTCGGCTGGGTGCTTCAGAACTGGGAGGGCGC
AATTATTCTTGCAGGGAACAAATCAGTGGACCACCCTAGTAGCATCAAGGCGTTGGAAGCCATGGCCGTTCTTGAAGGGATTCGGGCGAAGAACTATCTTGTAACTTTTC
CAATCCAAGTGGAATCTGATTCCGTAGAGGTTGATCGGGTTGCGAACTACTGTGCCCATCACCTTGCGCGTCGTGCTTTAAAGAATAGGGAGAGTGAAATGTGGGATTTT
TCACTCCCCAATTGGCTGGAAGTTGTGGCCATTATGGACCTTTCGGTTGATTAA
Protein sequenceShow/hide protein sequence
MPDNHAADSNSHRPPPNFPVVHQTGGLGWVLQNWEGAIILAGNKSVDHPSSIKALEAMAVLEGIRAKNYLVTFPIQVESDSVEVDRVANYCAHHLARRALKNRESEMWDF
SLPNWLEVVAIMDLSVD