CuGenDBv2

Gene ID	Moc07g09570
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Gag/pol protein
Genome location	chr7:7399544..7403973
RNA-Seq Expression	Moc07g09570
Synteny	Moc07g09570
Gene Ontology terms	GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008234 - cysteine-type peptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]

1.4e-78

65.55

Show/hide

Query:  MSTSIIALLAAEKLNDENYKQWKSNLNTILVINDLRFVLQEDCPQVLVLNATMAVHNVYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKKTMDSLQS
        M+++ + +LAA+KLN  NY  WK+ +NT+L+I+DLRFVL E+CPQV   NAT  V   Y+RW KAN+KA+ YILAS+S+VLAKKHE  +TA++ MDSLQ 
Subjt:  MSTSIIALLAAEKLNDENYKQWKSNLNTILVINDLRFVLQEDCPQVLVLNATMAVHNVYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKKTMDSLQS

Query:  MFGQSSSQARHEALKFIYNSRVKEGSSVREHVLNLMVHFNVAELNGAVIDEQCQVSVILESLSKSFLPFHSNVVMNKLEYTLTTLLNKLQTYQSLLKNKR
        MFGQ+S Q +H+ALK+IYN+R+ EG+SVREHVLN+MVHFNVAE+NGAVIDE  QVS ILESL +SFL F SN VMNK+ YTLTTLLN+LQT++SL+K K 
Subjt:  MFGQSSSQARHEALKFIYNSRVKEGSSVREHVLNLMVHFNVAELNGAVIDEQCQVSVILESLSKSFLPFHSNVVMNKLEYTLTTLLNKLQTYQSLLKNKR

Query:  QEGEANVAIS-KRFHRVSSSGTKTAPSSSGSKTFKKKK
        Q+GEANVA S ++FHR S+SGTK+ PSSSG+K +KKKK
Subjt:  QEGEANVAIS-KRFHRVSSSGTKTAPSSSGSKTFKKKK

KAA0051952.1 gag/pol protein [Cucumis melo var. makuwa]

1.4e-78

65.55

Show/hide

Query:  MSTSIIALLAAEKLNDENYKQWKSNLNTILVINDLRFVLQEDCPQVLVLNATMAVHNVYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKKTMDSLQS
        M+++ + +LAA+KLN  NY  WK+ +NT+L+I+DLRFVL E+CPQV   NAT  V   Y+RW KAN+KA+ YILAS+S+VLAKKHE  +TA++ MDSLQ 
Subjt:  MSTSIIALLAAEKLNDENYKQWKSNLNTILVINDLRFVLQEDCPQVLVLNATMAVHNVYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKKTMDSLQS

Query:  MFGQSSSQARHEALKFIYNSRVKEGSSVREHVLNLMVHFNVAELNGAVIDEQCQVSVILESLSKSFLPFHSNVVMNKLEYTLTTLLNKLQTYQSLLKNKR
        MFGQ+S Q +H+ALK+IYN+R+ EG+SVREHVLN+MVHFNVAE+NGAVIDE  QVS ILESL +SFL F SN VMNK+ YTLTTLLN+LQT++SL+K K 
Subjt:  MFGQSSSQARHEALKFIYNSRVKEGSSVREHVLNLMVHFNVAELNGAVIDEQCQVSVILESLSKSFLPFHSNVVMNKLEYTLTTLLNKLQTYQSLLKNKR

Query:  QEGEANVAIS-KRFHRVSSSGTKTAPSSSGSKTFKKKK
        Q+GEANVA S ++FHR S+SGTK+ PSSSG+K +KKKK
Subjt:  QEGEANVAIS-KRFHRVSSSGTKTAPSSSGSKTFKKKK

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]

1.4e-78

65.55

Show/hide

Query:  MSTSIIALLAAEKLNDENYKQWKSNLNTILVINDLRFVLQEDCPQVLVLNATMAVHNVYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKKTMDSLQS
        M+++ + +LAA+KLN  NY  WK+ +NT+L+I+DLRFVL E+CPQV   NAT  V   Y+RW KAN+KA+ YILAS+S+VLAKKHE  +TA++ MDSLQ 
Subjt:  MSTSIIALLAAEKLNDENYKQWKSNLNTILVINDLRFVLQEDCPQVLVLNATMAVHNVYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKKTMDSLQS

Query:  MFGQSSSQARHEALKFIYNSRVKEGSSVREHVLNLMVHFNVAELNGAVIDEQCQVSVILESLSKSFLPFHSNVVMNKLEYTLTTLLNKLQTYQSLLKNKR
        MFGQ+S Q +H+ALK+IYN+R+ EG+SVREHVLN+MVHFNVAE+NGAVIDE  QVS ILESL +SFL F SN VMNK+ YTLTTLLN+LQT++SL+K K 
Subjt:  MFGQSSSQARHEALKFIYNSRVKEGSSVREHVLNLMVHFNVAELNGAVIDEQCQVSVILESLSKSFLPFHSNVVMNKLEYTLTTLLNKLQTYQSLLKNKR

Query:  QEGEANVAIS-KRFHRVSSSGTKTAPSSSGSKTFKKKK
        Q+GEANVA S ++FHR S+SGTK+ PSSSG+K +KKKK
Subjt:  QEGEANVAIS-KRFHRVSSSGTKTAPSSSGSKTFKKKK

KAA0061339.1 gag/pol protein [Cucumis melo var. makuwa]

1.4e-78

65.55

Show/hide

Query:  MSTSIIALLAAEKLNDENYKQWKSNLNTILVINDLRFVLQEDCPQVLVLNATMAVHNVYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKKTMDSLQS
        M+++ + +LAA+KLN  NY  WK+ +NT+L+I+DLRFVL E+CPQV   NAT  V   Y+RW KAN+KA+ YILAS+S+VLAKKHE  +TA++ MDSLQ 
Subjt:  MSTSIIALLAAEKLNDENYKQWKSNLNTILVINDLRFVLQEDCPQVLVLNATMAVHNVYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKKTMDSLQS

Query:  MFGQSSSQARHEALKFIYNSRVKEGSSVREHVLNLMVHFNVAELNGAVIDEQCQVSVILESLSKSFLPFHSNVVMNKLEYTLTTLLNKLQTYQSLLKNKR
        MFGQ+S Q +H+ALK+IYN+R+ EG+SVREHVLN+MVHFNVAE+NGAVIDE  QVS ILESL +SFL F SN VMNK+ YTLTTLLN+LQT++SL+K K 
Subjt:  MFGQSSSQARHEALKFIYNSRVKEGSSVREHVLNLMVHFNVAELNGAVIDEQCQVSVILESLSKSFLPFHSNVVMNKLEYTLTTLLNKLQTYQSLLKNKR

Query:  QEGEANVAIS-KRFHRVSSSGTKTAPSSSGSKTFKKKK
        Q+GEANVA S ++FHR S+SGTK+ PSSSG+K +KKKK
Subjt:  QEGEANVAIS-KRFHRVSSSGTKTAPSSSGSKTFKKKK

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]

1.4e-78

65.55

Show/hide

Query:  MSTSIIALLAAEKLNDENYKQWKSNLNTILVINDLRFVLQEDCPQVLVLNATMAVHNVYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKKTMDSLQS
        M+++ + +LAA+KLN  NY  WK+ +NT+L+I+DLRFVL E+CPQV   NAT  V   Y+RW KAN+KA+ YILAS+S+VLAKKHE  +TA++ MDSLQ 
Subjt:  MSTSIIALLAAEKLNDENYKQWKSNLNTILVINDLRFVLQEDCPQVLVLNATMAVHNVYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKKTMDSLQS

Query:  MFGQSSSQARHEALKFIYNSRVKEGSSVREHVLNLMVHFNVAELNGAVIDEQCQVSVILESLSKSFLPFHSNVVMNKLEYTLTTLLNKLQTYQSLLKNKR
        MFGQ+S Q +H+ALK+IYN+R+ EG+SVREHVLN+MVHFNVAE+NGAVIDE  QVS ILESL +SFL F SN VMNK+ YTLTTLLN+LQT++SL+K K 
Subjt:  MFGQSSSQARHEALKFIYNSRVKEGSSVREHVLNLMVHFNVAELNGAVIDEQCQVSVILESLSKSFLPFHSNVVMNKLEYTLTTLLNKLQTYQSLLKNKR

Query:  QEGEANVAIS-KRFHRVSSSGTKTAPSSSGSKTFKKKK
        Q+GEANVA S ++FHR S+SGTK+ PSSSG+K +KKKK
Subjt:  QEGEANVAIS-KRFHRVSSSGTKTAPSSSGSKTFKKKK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SMH8 Gag/pol protein

6.8e-79

65.55

Show/hide

Query:  MSTSIIALLAAEKLNDENYKQWKSNLNTILVINDLRFVLQEDCPQVLVLNATMAVHNVYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKKTMDSLQS
        M+++ + +LAA+KLN  NY  WK+ +NT+L+I+DLRFVL E+CPQV   NAT  V   Y+RW KAN+KA+ YILAS+S+VLAKKHE  +TA++ MDSLQ 
Subjt:  MSTSIIALLAAEKLNDENYKQWKSNLNTILVINDLRFVLQEDCPQVLVLNATMAVHNVYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKKTMDSLQS

Query:  MFGQSSSQARHEALKFIYNSRVKEGSSVREHVLNLMVHFNVAELNGAVIDEQCQVSVILESLSKSFLPFHSNVVMNKLEYTLTTLLNKLQTYQSLLKNKR
        MFGQ+S Q +H+ALK+IYN+R+ EG+SVREHVLN+MVHFNVAE+NGAVIDE  QVS ILESL +SFL F SN VMNK+ YTLTTLLN+LQT++SL+K K 
Subjt:  MFGQSSSQARHEALKFIYNSRVKEGSSVREHVLNLMVHFNVAELNGAVIDEQCQVSVILESLSKSFLPFHSNVVMNKLEYTLTTLLNKLQTYQSLLKNKR

Query:  QEGEANVAIS-KRFHRVSSSGTKTAPSSSGSKTFKKKK
        Q+GEANVA S ++FHR S+SGTK+ PSSSG+K +KKKK
Subjt:  QEGEANVAIS-KRFHRVSSSGTKTAPSSSGSKTFKKKK

A0A5A7TU93 Gag/pol protein

6.8e-79

65.55

Show/hide

Query:  MSTSIIALLAAEKLNDENYKQWKSNLNTILVINDLRFVLQEDCPQVLVLNATMAVHNVYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKKTMDSLQS
        M+++ + +LAA+KLN  NY  WK+ +NT+L+I+DLRFVL E+CPQV   NAT  V   Y+RW KAN+KA+ YILAS+S+VLAKKHE  +TA++ MDSLQ 
Subjt:  MSTSIIALLAAEKLNDENYKQWKSNLNTILVINDLRFVLQEDCPQVLVLNATMAVHNVYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKKTMDSLQS

Query:  MFGQSSSQARHEALKFIYNSRVKEGSSVREHVLNLMVHFNVAELNGAVIDEQCQVSVILESLSKSFLPFHSNVVMNKLEYTLTTLLNKLQTYQSLLKNKR
        MFGQ+S Q +H+ALK+IYN+R+ EG+SVREHVLN+MVHFNVAE+NGAVIDE  QVS ILESL +SFL F SN VMNK+ YTLTTLLN+LQT++SL+K K 
Subjt:  MFGQSSSQARHEALKFIYNSRVKEGSSVREHVLNLMVHFNVAELNGAVIDEQCQVSVILESLSKSFLPFHSNVVMNKLEYTLTTLLNKLQTYQSLLKNKR

Query:  QEGEANVAIS-KRFHRVSSSGTKTAPSSSGSKTFKKKK
        Q+GEANVA S ++FHR S+SGTK+ PSSSG+K +KKKK
Subjt:  QEGEANVAIS-KRFHRVSSSGTKTAPSSSGSKTFKKKK

A0A5A7TWB9 Gag/pol protein

6.8e-79

65.55

Show/hide

Query:  MSTSIIALLAAEKLNDENYKQWKSNLNTILVINDLRFVLQEDCPQVLVLNATMAVHNVYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKKTMDSLQS
        M+++ + +LAA+KLN  NY  WK+ +NT+L+I+DLRFVL E+CPQV   NAT  V   Y+RW KAN+KA+ YILAS+S+VLAKKHE  +TA++ MDSLQ 
Subjt:  MSTSIIALLAAEKLNDENYKQWKSNLNTILVINDLRFVLQEDCPQVLVLNATMAVHNVYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKKTMDSLQS

Query:  MFGQSSSQARHEALKFIYNSRVKEGSSVREHVLNLMVHFNVAELNGAVIDEQCQVSVILESLSKSFLPFHSNVVMNKLEYTLTTLLNKLQTYQSLLKNKR
        MFGQ+S Q +H+ALK+IYN+R+ EG+SVREHVLN+MVHFNVAE+NGAVIDE  QVS ILESL +SFL F SN VMNK+ YTLTTLLN+LQT++SL+K K 
Subjt:  MFGQSSSQARHEALKFIYNSRVKEGSSVREHVLNLMVHFNVAELNGAVIDEQCQVSVILESLSKSFLPFHSNVVMNKLEYTLTTLLNKLQTYQSLLKNKR

Query:  QEGEANVAIS-KRFHRVSSSGTKTAPSSSGSKTFKKKK
        Q+GEANVA S ++FHR S+SGTK+ PSSSG+K +KKKK
Subjt:  QEGEANVAIS-KRFHRVSSSGTKTAPSSSGSKTFKKKK

A0A5A7V6N0 Gag/pol protein

6.8e-79

65.55

Show/hide

Query:  MSTSIIALLAAEKLNDENYKQWKSNLNTILVINDLRFVLQEDCPQVLVLNATMAVHNVYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKKTMDSLQS
        M+++ + +LAA+KLN  NY  WK+ +NT+L+I+DLRFVL E+CPQV   NAT  V   Y+RW KAN+KA+ YILAS+S+VLAKKHE  +TA++ MDSLQ 
Subjt:  MSTSIIALLAAEKLNDENYKQWKSNLNTILVINDLRFVLQEDCPQVLVLNATMAVHNVYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKKTMDSLQS

Query:  MFGQSSSQARHEALKFIYNSRVKEGSSVREHVLNLMVHFNVAELNGAVIDEQCQVSVILESLSKSFLPFHSNVVMNKLEYTLTTLLNKLQTYQSLLKNKR
        MFGQ+S Q +H+ALK+IYN+R+ EG+SVREHVLN+MVHFNVAE+NGAVIDE  QVS ILESL +SFL F SN VMNK+ YTLTTLLN+LQT++SL+K K 
Subjt:  MFGQSSSQARHEALKFIYNSRVKEGSSVREHVLNLMVHFNVAELNGAVIDEQCQVSVILESLSKSFLPFHSNVVMNKLEYTLTTLLNKLQTYQSLLKNKR

Query:  QEGEANVAIS-KRFHRVSSSGTKTAPSSSGSKTFKKKK
        Q+GEANVA S ++FHR S+SGTK+ PSSSG+K +KKKK
Subjt:  QEGEANVAIS-KRFHRVSSSGTKTAPSSSGSKTFKKKK

A0A5D3CPJ6 Gag/pol protein

6.8e-79

65.55

Show/hide

Query:  MSTSIIALLAAEKLNDENYKQWKSNLNTILVINDLRFVLQEDCPQVLVLNATMAVHNVYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKKTMDSLQS
        M+++ + +LAA+KLN  NY  WK+ +NT+L+I+DLRFVL E+CPQV   NAT  V   Y+RW KAN+KA+ YILAS+S+VLAKKHE  +TA++ MDSLQ 
Subjt:  MSTSIIALLAAEKLNDENYKQWKSNLNTILVINDLRFVLQEDCPQVLVLNATMAVHNVYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKKTMDSLQS

Query:  MFGQSSSQARHEALKFIYNSRVKEGSSVREHVLNLMVHFNVAELNGAVIDEQCQVSVILESLSKSFLPFHSNVVMNKLEYTLTTLLNKLQTYQSLLKNKR
        MFGQ+S Q +H+ALK+IYN+R+ EG+SVREHVLN+MVHFNVAE+NGAVIDE  QVS ILESL +SFL F SN VMNK+ YTLTTLLN+LQT++SL+K K 
Subjt:  MFGQSSSQARHEALKFIYNSRVKEGSSVREHVLNLMVHFNVAELNGAVIDEQCQVSVILESLSKSFLPFHSNVVMNKLEYTLTTLLNKLQTYQSLLKNKR

Query:  QEGEANVAIS-KRFHRVSSSGTKTAPSSSGSKTFKKKK
        Q+GEANVA S ++FHR S+SGTK+ PSSSG+K +KKKK
Subjt:  QEGEANVAIS-KRFHRVSSSGTKTAPSSSGSKTFKKKK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

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ATGATTCCGTCAATAAAGACAAAATCAAATATTCCAAGTTCCACCGGTACTATTGATACGACACGGTCGACTGTCACGATCTCAAGGATCAAGTCGAGTCCCTGGCTAAA
GCCTAAGAAATATAATGGTAGTCAAAACTGTCTAAAGCCTAAGTCCCCTAAAAAGGTCAAACAACCCCAAGCCATCTTAACTGCAATAGCAACCAAGCCCGGACTCCTCA
TAACGTTCGAAGATGGAGAAGCCAGCATTCAGCTTCAGTCATACAATGACCCGCTCGTGATAGCCATGGAAATTGACCAAGTTCCAACGCACCGAGTACTGGTGGATGGT
GGATGCATGTCTACTTCTATAATTGCTTTGTTAGCCGCTGAAAAACTTAACGACGAGAATTACAAACAATGGAAATCGAACCTAAACACTATACTAGTGATAAATGATCT
TAGGTTCGTCTTGCAAGAGGATTGTCCTCAAGTTCTTGTGCTTAACGCCACTATGGCGGTGCACAACGTCTATGATCGATGGATCAAGGCCAATGACAAGGCTAAGGTCT
ACATCTTGGCGAGCATATCTGATGTGCTTGCTAAGAAGCATGAGGACACGGTCACCGCTAAGAAGACCATGGACTCGCTGCAGAGCATGTTTGGACAATCGTCCTCACAG
GCTCGACATGAAGCCCTTAAGTTCATTTACAACTCCCGCGTGAAGGAGGGTTCCTCAGTGCGAGAACATGTTCTCAACCTGATGGTCCACTTCAACGTGGCAGAGTTGAA
TGGGGCTGTCATAGACGAGCAATGTCAGGTCAGCGTCATTTTGGAATCTCTTTCGAAGAGTTTCCTGCCATTCCACAGTAATGTGGTTATGAATAAGCTAGAGTATACTC
TCACCACGCTCTTAAACAAGCTGCAGACCTACCAGTCTCTTCTGAAAAATAAGAGACAAGAAGGGGAGGCAAACGTTGCCATCTCAAAGAGGTTCCACCGAGTTTCATCC
TCTGGAACCAAGACTGCACCCTCTTCTTCTGGAAGTAAGACTTTCAAGAAGAAGAAGGCTGCTGTTAAGGAGTCCAAACCTGACTCGCTGATGTCGCTGCAAAGAAAGGC
AGTGTCAAGGCTGCAGATAAAGGAAAATGTTTCCACTGCAACCCATCCCCCACCCCCCGATTTCTTCTTCTCCATCTTCCCAACCCAGCAGCCCCTTGTTCTCGTTTTCC
GGCAACTCCTAACGGCGGCGCGACATCGACGTGAGCGACCCGACGGCGACCCAACCTCCCTCCTCCGACGTTGTGCGACGTCACGGCGGTTCTGCGCACGGGTTCCACGA
GCAGCGGTGGTGCAACTCTTGCGGCGTTCGAGCAGCGGCGGCCGGGCGCGACCTTGCGACGTTCGAGCAGCGACGGCCGGGCGCGACTCCCTTGGCGGCGTTTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MIPSIKTKSNIPSSTGTIDTTRSTVTISRIKSSPWLKPKKYNGSQNCLKPKSPKKVKQPQAILTAIATKPGLLITFEDGEASIQLQSYNDPLVIAMEIDQVPTHRVLVDG
GCMSTSIIALLAAEKLNDENYKQWKSNLNTILVINDLRFVLQEDCPQVLVLNATMAVHNVYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKKTMDSLQSMFGQSSSQ
ARHEALKFIYNSRVKEGSSVREHVLNLMVHFNVAELNGAVIDEQCQVSVILESLSKSFLPFHSNVVMNKLEYTLTTLLNKLQTYQSLLKNKRQEGEANVAISKRFHRVSS
SGTKTAPSSSGSKTFKKKKAAVKESKPDSLMSLQRKAVSRLQIKENVSTATHPPPPDFFFSIFPTQQPLVLVFRQLLTAARHRRERPDGDPTSLLRRCATSRRFCARVPR
AAVVQLLRRSSSGGRARPCDVRAATAGRDSLGGV

Moc07g09570 (gene) of Bitter gourd (OHB3-1) v2 genome