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Moc07g09600 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g09600
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr7:7415840..7417084
RNA-Seq ExpressionMoc07g09600
SyntenyMoc07g09600
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFY92947.1 hypothetical protein Acr_08g0013430 [Actinidia rufa]7.9e-3542.72Show/hide
Query:  SWMDPIADFI-KGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLVEYYEPT---------------------------------TN
        +W+D I D++ KG  P+D  + R+L  R+ARF + +G LY+R FS PLLRCL PEE    Y + T                                  N
Subjt:  SWMDPIADFI-KGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLVEYYEPT---------------------------------TN

Query:  EDGLLLNLDLLEERRAMAQLRLTEYQGRMARHYNARVRPRAFQVGHLVLRRV-----QTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAHPWNAE
        E  L LNLDLL+E+R  A+LR   Y+GR+A++YN RV  R+F  G LV RRV         G L P WEGP+++  + RPGT  L DL G  L+HPWNAE
Subjt:  EDGLLLNLDLLEERRAMAQLRLTEYQGRMARHYNARVRPRAFQVGHLVLRRV-----QTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAHPWNAE

Query:  HLKRYY
        HLK+YY
Subjt:  HLKRYY

XP_022144032.1 uncharacterized protein LOC111013824 [Momordica charantia]4.1e-3131.35Show/hide
Query:  MEIGAPESSWMDPIADFIKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLV--------------------------EYYEPTTN
        ME+  PE SWMDPI +FIK N PQD K  +K++R+ ARF++RDGALYRRGFSLPLL+C+TPE+G                             YY P  +
Subjt:  MEIGAPESSWMDPIADFIKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLV--------------------------EYYEPTTN

Query:  ED--------------------------------------------------------------------------------------------------
        +D                                                                                                  
Subjt:  ED--------------------------------------------------------------------------------------------------

Query:  -------GLLLNLDLLEERRAMAQLR-LTEYQGRMARHYNARVRPRAF--------QVG---HLVLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADL
               GL + LD  + R A      L  Y+  +    +  +   AF        ++G   + V +++Q+HVG LDP+WEGPFE+KGI+R GTY+LADL
Subjt:  -------GLLLNLDLLEERRAMAQLR-LTEYQGRMARHYNARVRPRAF--------QVG---HLVLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADL

Query:  KGDVLAHPWNAEHLKRYYP
        +G+VLAHPWNAEHLKRYYP
Subjt:  KGDVLAHPWNAEHLKRYYP

XP_022156070.1 uncharacterized protein K02A2.6-like [Momordica charantia]3.3e-3369Show/hide
Query:  VEYYEPTTNEDGLLLNLDLLEERRAMAQLRLTEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAHP
        VEYYE   NE+ LLL LDL++E+R  AQLRL EYQ +MARHYN+RVR R+FQ+G+LVLR+VQ HV  L+P+WEGPFE+KGIVRPGTY+LADL+G +L+HP
Subjt:  VEYYEPTTNEDGLLLNLDLLEERRAMAQLRLTEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAHP

XP_022156070.1 uncharacterized protein K02A2.6-like [Momordica charantia]6.3e-0849.23Show/hide
Query:  MDPIADFIKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLVEYYEPTTNE
        MDPI DF++G    D KE +++AR+ AR+++R+G LYR GFSLPLL+C+  E+G  EY     +E
Subjt:  MDPIADFIKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLVEYYEPTTNE

XP_022156070.1 uncharacterized protein K02A2.6-like [Momordica charantia]5.7e-3335.04Show/hide
Query:  MEIGAPESSWMDPIADF-IKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPE-----------------------EGL-----------
        M++   + +WMD I +F + G+ P DP + RKL  ++A +++++  L++RG+SLPLLRCL PE                        GL           
Subjt:  MEIGAPESSWMDPIADF-IKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPE-----------------------EGL-----------

Query:  --------------------------------------------VEYYEPTTNEDGLLLNLDLLEERRAMAQLRLTEYQGRMARHYNARVRPRAFQVGHL
                                                    VE +   TN + LL+NLDLL E+R+ +QLRL EY  RMA +YNARV+ R F+ G L
Subjt:  --------------------------------------------VEYYEPTTNEDGLLLNLDLLEERRAMAQLRLTEYQGRMARHYNARVRPRAFQVGHL

Query:  VLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAHPWNAEHLKRYY
        VL++V  HV AL P WEGP+ +  I+RP  Y+   L G  L HPWNAEHL+ YY
Subjt:  VLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAHPWNAEHLKRYY

XP_022159003.1 uncharacterized protein LOC111025448 [Momordica charantia]6.3e-4072.07Show/hide
Query:  VEYYEPTTNEDGLLLNLDLLEERRAMAQLRLTEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAHP
        +E YEP  NE  LLLNLDLLE +R  AQLRL E Q RMARHYN R++PR+FQVGHLV  ++Q+HVG LDP+WE  FE+KGIVRPGTY+LADL+  VLAHP
Subjt:  VEYYEPTTNEDGLLLNLDLLEERRAMAQLRLTEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAHP

Query:  WNAEHLKRYYP
        WNAEHLKRYYP
Subjt:  WNAEHLKRYYP

TrEMBL top hitse value%identityAlignment
A0A6J1CSJ1 Ribonuclease H2.0e-3131.35Show/hide
Query:  MEIGAPESSWMDPIADFIKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLV--------------------------EYYEPTTN
        ME+  PE SWMDPI +FIK N PQD K  +K++R+ ARF++RDGALYRRGFSLPLL+C+TPE+G                             YY P  +
Subjt:  MEIGAPESSWMDPIADFIKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLV--------------------------EYYEPTTN

Query:  ED--------------------------------------------------------------------------------------------------
        +D                                                                                                  
Subjt:  ED--------------------------------------------------------------------------------------------------

Query:  -------GLLLNLDLLEERRAMAQLR-LTEYQGRMARHYNARVRPRAF--------QVG---HLVLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADL
               GL + LD  + R A      L  Y+  +    +  +   AF        ++G   + V +++Q+HVG LDP+WEGPFE+KGI+R GTY+LADL
Subjt:  -------GLLLNLDLLEERRAMAQLR-LTEYQGRMARHYNARVRPRAF--------QVG---HLVLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADL

Query:  KGDVLAHPWNAEHLKRYYP
        +G+VLAHPWNAEHLKRYYP
Subjt:  KGDVLAHPWNAEHLKRYYP

A0A6J1DP99 uncharacterized protein K02A2.6-like1.6e-3369Show/hide
Query:  VEYYEPTTNEDGLLLNLDLLEERRAMAQLRLTEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAHP
        VEYYE   NE+ LLL LDL++E+R  AQLRL EYQ +MARHYN+RVR R+FQ+G+LVLR+VQ HV  L+P+WEGPFE+KGIVRPGTY+LADL+G +L+HP
Subjt:  VEYYEPTTNEDGLLLNLDLLEERRAMAQLRLTEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAHP

A0A6J1DP99 uncharacterized protein K02A2.6-like3.1e-0849.23Show/hide
Query:  MDPIADFIKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLVEYYEPTTNE
        MDPI DF++G    D KE +++AR+ AR+++R+G LYR GFSLPLL+C+  E+G  EY     +E
Subjt:  MDPIADFIKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLVEYYEPTTNE

A0A6J1DP99 uncharacterized protein K02A2.6-like2.8e-3335.04Show/hide
Query:  MEIGAPESSWMDPIADF-IKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPE-----------------------EGL-----------
        M++   + +WMD I +F + G+ P DP + RKL  ++A +++++  L++RG+SLPLLRCL PE                        GL           
Subjt:  MEIGAPESSWMDPIADF-IKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPE-----------------------EGL-----------

Query:  --------------------------------------------VEYYEPTTNEDGLLLNLDLLEERRAMAQLRLTEYQGRMARHYNARVRPRAFQVGHL
                                                    VE +   TN + LL+NLDLL E+R+ +QLRL EY  RMA +YNARV+ R F+ G L
Subjt:  --------------------------------------------VEYYEPTTNEDGLLLNLDLLEERRAMAQLRLTEYQGRMARHYNARVRPRAFQVGHL

Query:  VLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAHPWNAEHLKRYY
        VL++V  HV AL P WEGP+ +  I+RP  Y+   L G  L HPWNAEHL+ YY
Subjt:  VLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAHPWNAEHLKRYY

A0A6J1DXL9 uncharacterized protein LOC1110254483.0e-4072.07Show/hide
Query:  VEYYEPTTNEDGLLLNLDLLEERRAMAQLRLTEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAHP
        +E YEP  NE  LLLNLDLLE +R  AQLRL E Q RMARHYN R++PR+FQVGHLV  ++Q+HVG LDP+WE  FE+KGIVRPGTY+LADL+  VLAHP
Subjt:  VEYYEPTTNEDGLLLNLDLLEERRAMAQLRLTEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAHP

Query:  WNAEHLKRYYP
        WNAEHLKRYYP
Subjt:  WNAEHLKRYYP

A0A7J0F4U0 Uncharacterized protein3.8e-3542.72Show/hide
Query:  SWMDPIADFI-KGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLVEYYEPT---------------------------------TN
        +W+D I D++ KG  P+D  + R+L  R+ARF + +G LY+R FS PLLRCL PEE    Y + T                                  N
Subjt:  SWMDPIADFI-KGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLVEYYEPT---------------------------------TN

Query:  EDGLLLNLDLLEERRAMAQLRLTEYQGRMARHYNARVRPRAFQVGHLVLRRV-----QTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAHPWNAE
        E  L LNLDLL+E+R  A+LR   Y+GR+A++YN RV  R+F  G LV RRV         G L P WEGP+++  + RPGT  L DL G  L+HPWNAE
Subjt:  EDGLLLNLDLLEERRAMAQLRLTEYQGRMARHYNARVRPRAFQVGHLVLRRV-----QTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAHPWNAE

Query:  HLKRYY
        HLK+YY
Subjt:  HLKRYY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCGGCGCTCCAGAATCCTCGTGGATGGACCCGATCGCGGACTTCATTAAGGGCAACTCACCACAAGACCCCAAGGAGCGCAGAAAGTTGGCAAGGCGGGCAGC
TCGGTTCGTGGTTCGAGATGGGGCATTGTACCGACGTGGCTTTTCCCTGCCTCTATTGAGATGCCTAACCCCTGAAGAGGGCCTAGTAGAATATTATGAGCCTACGACGA
ATGAGGATGGGCTGCTCCTCAACCTCGACTTGTTGGAAGAAAGAAGAGCAATGGCCCAGCTACGCCTGACGGAATATCAGGGCAGAATGGCCAGACATTACAATGCCCGC
GTCCGACCTCGAGCCTTTCAGGTCGGACATCTGGTCTTAAGGAGGGTCCAAACGCATGTGGGTGCCCTTGACCCGGCCTGGGAGGGCCCGTTTGAGATCAAGGGCATAGT
CCGACCTGGGACGTACATATTGGCCGATCTGAAAGGAGACGTCCTCGCGCACCCGTGGAACGCGGAGCACCTGAAGCGTTATTATCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATCGGCGCTCCAGAATCCTCGTGGATGGACCCGATCGCGGACTTCATTAAGGGCAACTCACCACAAGACCCCAAGGAGCGCAGAAAGTTGGCAAGGCGGGCAGC
TCGGTTCGTGGTTCGAGATGGGGCATTGTACCGACGTGGCTTTTCCCTGCCTCTATTGAGATGCCTAACCCCTGAAGAGGGCCTAGTAGAATATTATGAGCCTACGACGA
ATGAGGATGGGCTGCTCCTCAACCTCGACTTGTTGGAAGAAAGAAGAGCAATGGCCCAGCTACGCCTGACGGAATATCAGGGCAGAATGGCCAGACATTACAATGCCCGC
GTCCGACCTCGAGCCTTTCAGGTCGGACATCTGGTCTTAAGGAGGGTCCAAACGCATGTGGGTGCCCTTGACCCGGCCTGGGAGGGCCCGTTTGAGATCAAGGGCATAGT
CCGACCTGGGACGTACATATTGGCCGATCTGAAAGGAGACGTCCTCGCGCACCCGTGGAACGCGGAGCACCTGAAGCGTTATTATCCTTGA
Protein sequenceShow/hide protein sequence
MEIGAPESSWMDPIADFIKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLVEYYEPTTNEDGLLLNLDLLEERRAMAQLRLTEYQGRMARHYNAR
VRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAHPWNAEHLKRYYP