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Moc07g10140 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g10140
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr7:7795011..7795754
RNA-Seq ExpressionMoc07g10140
SyntenyMoc07g10140
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]4.3e-8789.83Show/hide
Query:  MPQYTTYNPLYDVPVGQYPHPFVKGAQQIPTNIIFLEPEQMMSPPTVFNLGGLPAKTDPVGQNAPSNENFEVLEERLRAIEGTDAFGNIDASQLCLVSGL
        MPQYTTYNPLYDVPVGQY HPFVKGAQQIPTNIIF EPEQMMSPPTV NLG L AKTDPVGQNAPSNE FEVL+ERLRAIE TD FGNIDASQLC VSGL
Subjt:  MPQYTTYNPLYDVPVGQYPHPFVKGAQQIPTNIIFLEPEQMMSPPTVFNLGGLPAKTDPVGQNAPSNENFEVLEERLRAIEGTDAFGNIDASQLCLVSGL

Query:  VRPSKFKVLEFEKYDGSSCPKNHLIMYCRKMAAYIQNDKLLIHCFQDSLSGPTSRWYMQLDSSHVGSWKNLADSFLK
        V P K KV EFEKY+GSSCPKNHL MYCRKMAAY+QNDKLLIHCFQDSLSGP SRWYMQLDSSHVGSWKNLADSFLK
Subjt:  VRPSKFKVLEFEKYDGSSCPKNHLIMYCRKMAAYIQNDKLLIHCFQDSLSGPTSRWYMQLDSSHVGSWKNLADSFLK

XP_022149382.1 uncharacterized protein LOC111017812 [Momordica charantia]7.3e-8780.88Show/hide
Query:  MEDQKAEQEKTRKDIEELREKLDAIFLVLEKGKAAADPATSSNPVHESQETPPYPPGYGPPLRPVAEGFMPQYTTYNPLYDVPVGQYPHPFVKGAQQIPT
        M+DQKAEQEK RKDIEELREKLD I L LEKGK  ADP TSSNPVH+ QE PPYP GY PPLR VAEGFM Q TTYNPLYD+ VGQYP PFVKG QQIPT
Subjt:  MEDQKAEQEKTRKDIEELREKLDAIFLVLEKGKAAADPATSSNPVHESQETPPYPPGYGPPLRPVAEGFMPQYTTYNPLYDVPVGQYPHPFVKGAQQIPT

Query:  NIIFLEPEQMMSPPTVFNLGGLPAKTDPVGQNAPSNENFEVLEERLRAIEGTDAFGNIDASQLCLVSGLVRPSKFKVLEFEKYDGSSCPKNHLIMYCRKM
        NIIF EPEQMM PPTV NLGGL  KTDPVGQ+ PSNE FEVLEERL A+EGTD FGNIDASQLCL+SGLV   KFKV EFEKYDGSSCPKNHLIMYC+ M
Subjt:  NIIFLEPEQMMSPPTVFNLGGLPAKTDPVGQNAPSNENFEVLEERLRAIEGTDAFGNIDASQLCLVSGLVRPSKFKVLEFEKYDGSSCPKNHLIMYCRKM

Query:  AAYI
        AAY+
Subjt:  AAYI

XP_022155098.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia]2.7e-9772.05Show/hide
Query:  MMEDQKAEQEKTRKDIEELREKLDAIFLVLEKGKAAADPATSSNPVHESQETPPYPPGY-------GPPLRPVAEGFMPQYTTYNPLYDVPVGQYPHPFV
        M +D+K+EQEKTRKDIEELREKLDAI L LEKGK  A+   +SNP+HE   TP +PPG+       GP  RP+ EGFM QYTTYNPLYD+P GQ+P P V
Subjt:  MMEDQKAEQEKTRKDIEELREKLDAIFLVLEKGKAAADPATSSNPVHESQETPPYPPGY-------GPPLRPVAEGFMPQYTTYNPLYDVPVGQYPHPFV

Query:  KGAQQIPTNIIFLEPEQMMSPPTVFNLGGLPAKTDPVGQNAPSNENFEVLEERLRAIEGTDAFGNIDASQLCLVSGLVRPSKFKVLEFEKYDGSSCPKNH
        +G  Q P  IIF EPEQ+++PPTV NLGG  A  DP  Q APS+E  EVLEERLRA+EGTD FGNIDASQLCL SGLV P KFK+ EFEKY+GSSCPKNH
Subjt:  KGAQQIPTNIIFLEPEQMMSPPTVFNLGGLPAKTDPVGQNAPSNENFEVLEERLRAIEGTDAFGNIDASQLCLVSGLVRPSKFKVLEFEKYDGSSCPKNH

Query:  LIMYCRKMAAYIQNDKLLIHCFQDSLSGPTSRWYMQLDSSHVGSWKNLADSFLK
        LIMYCRKMAAYIQNDKLLIHCFQDSLSGP S WYM LDS HV SWKNLADSFLK
Subjt:  LIMYCRKMAAYIQNDKLLIHCFQDSLSGPTSRWYMQLDSSHVGSWKNLADSFLK

XP_022157796.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]1.9e-12289.43Show/hide
Query:  MEDQKAEQEKTRKDIEELREKLDAIFLVLEKGKAAADPATSSNPVHESQETPPYPPGYGPPLRPVAEGFMPQYTTYNPLYDVPVGQYPHPFVKGAQQIPT
        MEDQKAEQEKTRKDIEELREKLD I L LEKGKA ADPATSSNP+HE QETPPYPPGYGPPLRPVAEGFMPQYTTYNPLYDVP+GQYPH FVKGAQQIPT
Subjt:  MEDQKAEQEKTRKDIEELREKLDAIFLVLEKGKAAADPATSSNPVHESQETPPYPPGYGPPLRPVAEGFMPQYTTYNPLYDVPVGQYPHPFVKGAQQIPT

Query:  NIIFLEPEQMMSPPTVFNLGGLPAKTDPVGQNAPSNENFEVLEERLRAIEGTDAFGNIDASQLCLVSGLVRPSKFKVLEFEKYDGSSCPKNHLIMYCRKM
        NIIF EPEQMMSPPTV NLGG PAKTDPV QNA S E  EVLEERLRAIEGTD FGNIDASQLCLVSGLV P KFKV EFEKYDGSSCPKNHLIMYCRKM
Subjt:  NIIFLEPEQMMSPPTVFNLGGLPAKTDPVGQNAPSNENFEVLEERLRAIEGTDAFGNIDASQLCLVSGLVRPSKFKVLEFEKYDGSSCPKNHLIMYCRKM

Query:  AAYIQNDKLLIHCFQDSLSGPTSRWYMQLDSSHVGSWKNLADSFLK
         AY+QN KLLIHCFQDSL G  SRWYMQLDSSHVGSWKNLADSFLK
Subjt:  AAYIQNDKLLIHCFQDSLSGPTSRWYMQLDSSHVGSWKNLADSFLK

XP_022158986.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]4.2e-6691.97Show/hide
Query:  MMSPPTVFNLGGLPAKTDPVGQNAPSNENFEVLEERLRAIEGTDAFGNIDASQLCLVSGLVRPSKFKVLEFEKYDGSSCPKNHLIMYCRKMAAYIQNDKL
        MMSPPTV NLGGLPAKTD VGQNAPSNE FEVLEERLRAIEGT  FGNIDASQLCLVSGLV P KFKV EFEKYDGSSCPKNHLIMYCRKMAAY+QNDKL
Subjt:  MMSPPTVFNLGGLPAKTDPVGQNAPSNENFEVLEERLRAIEGTDAFGNIDASQLCLVSGLVRPSKFKVLEFEKYDGSSCPKNHLIMYCRKMAAYIQNDKL

Query:  LIHCFQDSLSGPTSRWYMQLDSSHVGSWKNLADSFLK
        LIHCFQDSLSGP SRWYMQLDSS+VGSWKNLADSFLK
Subjt:  LIHCFQDSLSGPTSRWYMQLDSSHVGSWKNLADSFLK

TrEMBL top hitse value%identityAlignment
A0A6J1D099 Ribonuclease H2.1e-8789.83Show/hide
Query:  MPQYTTYNPLYDVPVGQYPHPFVKGAQQIPTNIIFLEPEQMMSPPTVFNLGGLPAKTDPVGQNAPSNENFEVLEERLRAIEGTDAFGNIDASQLCLVSGL
        MPQYTTYNPLYDVPVGQY HPFVKGAQQIPTNIIF EPEQMMSPPTV NLG L AKTDPVGQNAPSNE FEVL+ERLRAIE TD FGNIDASQLC VSGL
Subjt:  MPQYTTYNPLYDVPVGQYPHPFVKGAQQIPTNIIFLEPEQMMSPPTVFNLGGLPAKTDPVGQNAPSNENFEVLEERLRAIEGTDAFGNIDASQLCLVSGL

Query:  VRPSKFKVLEFEKYDGSSCPKNHLIMYCRKMAAYIQNDKLLIHCFQDSLSGPTSRWYMQLDSSHVGSWKNLADSFLK
        V P K KV EFEKY+GSSCPKNHL MYCRKMAAY+QNDKLLIHCFQDSLSGP SRWYMQLDSSHVGSWKNLADSFLK
Subjt:  VRPSKFKVLEFEKYDGSSCPKNHLIMYCRKMAAYIQNDKLLIHCFQDSLSGPTSRWYMQLDSSHVGSWKNLADSFLK

A0A6J1D7T3 uncharacterized protein LOC1110178123.6e-8780.88Show/hide
Query:  MEDQKAEQEKTRKDIEELREKLDAIFLVLEKGKAAADPATSSNPVHESQETPPYPPGYGPPLRPVAEGFMPQYTTYNPLYDVPVGQYPHPFVKGAQQIPT
        M+DQKAEQEK RKDIEELREKLD I L LEKGK  ADP TSSNPVH+ QE PPYP GY PPLR VAEGFM Q TTYNPLYD+ VGQYP PFVKG QQIPT
Subjt:  MEDQKAEQEKTRKDIEELREKLDAIFLVLEKGKAAADPATSSNPVHESQETPPYPPGYGPPLRPVAEGFMPQYTTYNPLYDVPVGQYPHPFVKGAQQIPT

Query:  NIIFLEPEQMMSPPTVFNLGGLPAKTDPVGQNAPSNENFEVLEERLRAIEGTDAFGNIDASQLCLVSGLVRPSKFKVLEFEKYDGSSCPKNHLIMYCRKM
        NIIF EPEQMM PPTV NLGGL  KTDPVGQ+ PSNE FEVLEERL A+EGTD FGNIDASQLCL+SGLV   KFKV EFEKYDGSSCPKNHLIMYC+ M
Subjt:  NIIFLEPEQMMSPPTVFNLGGLPAKTDPVGQNAPSNENFEVLEERLRAIEGTDAFGNIDASQLCLVSGLVRPSKFKVLEFEKYDGSSCPKNHLIMYCRKM

Query:  AAYI
        AAY+
Subjt:  AAYI

A0A6J1DM29 LOW QUALITY PROTEIN: uncharacterized protein LOC1110222317.6e-9872.44Show/hide
Query:  MMEDQKAEQEKTRKDIEELREKLDAIFLVLEKGKAAADPATSSNPVHESQETPPYPPGY-------GPPLRPVAEGFMPQYTTYNPLYDVPVGQYPHPFV
        M +D+K+EQEKTRKDIEELREKLDAI L LEKGK  A+   +SNP+HE   TP +PPG+       GP  RP+ EGFM QYTTYNPLYD+P GQ+P P V
Subjt:  MMEDQKAEQEKTRKDIEELREKLDAIFLVLEKGKAAADPATSSNPVHESQETPPYPPGY-------GPPLRPVAEGFMPQYTTYNPLYDVPVGQYPHPFV

Query:  KGAQQIPTNIIFLEPEQMMSPPTVFNLGGLPAKTDPVGQNAPSNENFEVLEERLRAIEGTDAFGNIDASQLCLVSGLVRPSKFKVLEFEKYDGSSCPKNH
        +G  Q P  IIF EPEQ+++PPTV NLGG  A  DP  Q APS+E  EVLEERLRA+EGTD FGNIDASQLCL SGLV P KFK+ EFEKYDGSSCPKNH
Subjt:  KGAQQIPTNIIFLEPEQMMSPPTVFNLGGLPAKTDPVGQNAPSNENFEVLEERLRAIEGTDAFGNIDASQLCLVSGLVRPSKFKVLEFEKYDGSSCPKNH

Query:  LIMYCRKMAAYIQNDKLLIHCFQDSLSGPTSRWYMQLDSSHVGSWKNLADSFLK
        LIMYCRKMAAYIQNDKLLIHCFQDSLSGP S WYM LDS HV SWKNLADSFLK
Subjt:  LIMYCRKMAAYIQNDKLLIHCFQDSLSGPTSRWYMQLDSSHVGSWKNLADSFLK

A0A6J1DZ90 Ribonuclease H9.0e-12389.43Show/hide
Query:  MEDQKAEQEKTRKDIEELREKLDAIFLVLEKGKAAADPATSSNPVHESQETPPYPPGYGPPLRPVAEGFMPQYTTYNPLYDVPVGQYPHPFVKGAQQIPT
        MEDQKAEQEKTRKDIEELREKLD I L LEKGKA ADPATSSNP+HE QETPPYPPGYGPPLRPVAEGFMPQYTTYNPLYDVP+GQYPH FVKGAQQIPT
Subjt:  MEDQKAEQEKTRKDIEELREKLDAIFLVLEKGKAAADPATSSNPVHESQETPPYPPGYGPPLRPVAEGFMPQYTTYNPLYDVPVGQYPHPFVKGAQQIPT

Query:  NIIFLEPEQMMSPPTVFNLGGLPAKTDPVGQNAPSNENFEVLEERLRAIEGTDAFGNIDASQLCLVSGLVRPSKFKVLEFEKYDGSSCPKNHLIMYCRKM
        NIIF EPEQMMSPPTV NLGG PAKTDPV QNA S E  EVLEERLRAIEGTD FGNIDASQLCLVSGLV P KFKV EFEKYDGSSCPKNHLIMYCRKM
Subjt:  NIIFLEPEQMMSPPTVFNLGGLPAKTDPVGQNAPSNENFEVLEERLRAIEGTDAFGNIDASQLCLVSGLVRPSKFKVLEFEKYDGSSCPKNHLIMYCRKM

Query:  AAYIQNDKLLIHCFQDSLSGPTSRWYMQLDSSHVGSWKNLADSFLK
         AY+QN KLLIHCFQDSL G  SRWYMQLDSSHVGSWKNLADSFLK
Subjt:  AAYIQNDKLLIHCFQDSLSGPTSRWYMQLDSSHVGSWKNLADSFLK

A0A6J1E2J7 Ribonuclease H2.0e-6691.97Show/hide
Query:  MMSPPTVFNLGGLPAKTDPVGQNAPSNENFEVLEERLRAIEGTDAFGNIDASQLCLVSGLVRPSKFKVLEFEKYDGSSCPKNHLIMYCRKMAAYIQNDKL
        MMSPPTV NLGGLPAKTD VGQNAPSNE FEVLEERLRAIEGT  FGNIDASQLCLVSGLV P KFKV EFEKYDGSSCPKNHLIMYCRKMAAY+QNDKL
Subjt:  MMSPPTVFNLGGLPAKTDPVGQNAPSNENFEVLEERLRAIEGTDAFGNIDASQLCLVSGLVRPSKFKVLEFEKYDGSSCPKNHLIMYCRKMAAYIQNDKL

Query:  LIHCFQDSLSGPTSRWYMQLDSSHVGSWKNLADSFLK
        LIHCFQDSLSGP SRWYMQLDSS+VGSWKNLADSFLK
Subjt:  LIHCFQDSLSGPTSRWYMQLDSSHVGSWKNLADSFLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAAGATCAAAAAGCCGAGCAGGAGAAAACAAGGAAAGATATTGAGGAGTTGCGAGAAAAGTTAGATGCCATCTTCCTCGTGTTGGAAAAAGGCAAAGCGGCTGC
AGATCCTGCTACATCTAGCAACCCTGTCCATGAGTCGCAAGAAACCCCACCTTATCCACCTGGGTACGGTCCACCTCTTAGGCCAGTGGCAGAGGGTTTCATGCCACAAT
ATACAACGTATAACCCTCTGTATGACGTCCCGGTTGGTCAGTATCCGCATCCCTTTGTTAAAGGAGCTCAGCAAATCCCAACGAACATCATTTTTCTAGAGCCCGAGCAA
ATGATGTCACCCCCTACAGTCTTTAACCTAGGTGGTCTCCCAGCCAAGACAGACCCAGTCGGACAAAATGCCCCCAGTAACGAGAATTTCGAAGTTCTGGAGGAAAGATT
AAGAGCAATAGAGGGGACGGACGCTTTTGGTAACATTGATGCCTCACAATTGTGTTTGGTGTCTGGATTAGTCAGACCTTCAAAATTCAAGGTGCTAGAGTTTGAGAAGT
ACGATGGTTCTTCTTGTCCTAAGAATCATCTTATAATGTATTGTAGGAAGATGGCAGCATACATCCAAAATGACAAATTGTTGATACACTGCTTTCAAGATAGTTTATCT
GGTCCGACCTCTCGTTGGTACATGCAGTTAGATAGCTCTCATGTTGGCTCGTGGAAGAATCTGGCCGACTCCTTCCTAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGGAAGATCAAAAAGCCGAGCAGGAGAAAACAAGGAAAGATATTGAGGAGTTGCGAGAAAAGTTAGATGCCATCTTCCTCGTGTTGGAAAAAGGCAAAGCGGCTGC
AGATCCTGCTACATCTAGCAACCCTGTCCATGAGTCGCAAGAAACCCCACCTTATCCACCTGGGTACGGTCCACCTCTTAGGCCAGTGGCAGAGGGTTTCATGCCACAAT
ATACAACGTATAACCCTCTGTATGACGTCCCGGTTGGTCAGTATCCGCATCCCTTTGTTAAAGGAGCTCAGCAAATCCCAACGAACATCATTTTTCTAGAGCCCGAGCAA
ATGATGTCACCCCCTACAGTCTTTAACCTAGGTGGTCTCCCAGCCAAGACAGACCCAGTCGGACAAAATGCCCCCAGTAACGAGAATTTCGAAGTTCTGGAGGAAAGATT
AAGAGCAATAGAGGGGACGGACGCTTTTGGTAACATTGATGCCTCACAATTGTGTTTGGTGTCTGGATTAGTCAGACCTTCAAAATTCAAGGTGCTAGAGTTTGAGAAGT
ACGATGGTTCTTCTTGTCCTAAGAATCATCTTATAATGTATTGTAGGAAGATGGCAGCATACATCCAAAATGACAAATTGTTGATACACTGCTTTCAAGATAGTTTATCT
GGTCCGACCTCTCGTTGGTACATGCAGTTAGATAGCTCTCATGTTGGCTCGTGGAAGAATCTGGCCGACTCCTTCCTAAAATAA
Protein sequenceShow/hide protein sequence
MMEDQKAEQEKTRKDIEELREKLDAIFLVLEKGKAAADPATSSNPVHESQETPPYPPGYGPPLRPVAEGFMPQYTTYNPLYDVPVGQYPHPFVKGAQQIPTNIIFLEPEQ
MMSPPTVFNLGGLPAKTDPVGQNAPSNENFEVLEERLRAIEGTDAFGNIDASQLCLVSGLVRPSKFKVLEFEKYDGSSCPKNHLIMYCRKMAAYIQNDKLLIHCFQDSLS
GPTSRWYMQLDSSHVGSWKNLADSFLK