; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc07g10330 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g10330
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr7:7908562..7922498
RNA-Seq ExpressionMoc07g10330
SyntenyMoc07g10330
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD1831090.1 unnamed protein product [Ananas comosus var. bracteatus]1.8e-0440.3Show/hide
Query:  SGTEIEEKNVSNESDIIVSTNDESYMNLPIALRNEKRTCTQYPLSHFVSYDKLSSQYRSFMVNLTQV
        + +E    N+SN  D I    +   +N+PIA R   R+CTQ+P+ +F+SYDKLS  +R+F  N+T++
Subjt:  SGTEIEEKNVSNESDIIVSTNDESYMNLPIALRNEKRTCTQYPLSHFVSYDKLSSQYRSFMVNLTQV

CAN79660.1 hypothetical protein VITISV_004324 [Vitis vinifera]5.6e-0640.82Show/hide
Query:  RSSNPRTTMPLQVYSRRNTEKDKQVQESEYISGTEIEEKNVSNESDIIVSTNDESYMNLPIALRNEKRTCTQYPLSHFVSYDKLSSQYRSFMVNLTQV
        R      + PL+VYSRR      Q       + T   +K + N++  I + ND S ++LPI LR EKR CTQ+PLS+FVS++ LSS YR+F+  L+ +
Subjt:  RSSNPRTTMPLQVYSRRNTEKDKQVQESEYISGTEIEEKNVSNESDIIVSTNDESYMNLPIALRNEKRTCTQYPLSHFVSYDKLSSQYRSFMVNLTQV

RVW29700.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]1.8e-0450.88Show/hide
Query:  NVSNESDIIVSTNDESYMNLPIALRNEKRTCTQYPLSHFVSYDKLSSQYRSFMVNLT
        N   E+  I + ND S ++LPIALR EKR CTQ+PLS+FVS+D LS  Y++ +  L+
Subjt:  NVSNESDIIVSTNDESYMNLPIALRNEKRTCTQYPLSHFVSYDKLSSQYRSFMVNLT

RVW30881.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]8.1e-0536.63Show/hide
Query:  SSNPRTTMPLQVYSRRNTEK----DKQVQESEYISGTEIEEKNVSNESDIIVSTNDESYMNLPIALRNEKRTCTQYPLSHFVSYDKLSSQYRSFMVNLTQ
        S+     + L VYSRR   +    D  + E    S    E  + S +   +  T ++ YM  PIALR   R+CTQ+P+S+F+SYD+LSS+Y +F+ NL+ 
Subjt:  SSNPRTTMPLQVYSRRNTEK----DKQVQESEYISGTEIEEKNVSNESDIIVSTNDESYMNLPIALRNEKRTCTQYPLSHFVSYDKLSSQYRSFMVNLTQ

Query:  V
        +
Subjt:  V

RVW79575.1 hypothetical protein CK203_051695 [Vitis vinifera]1.6e-0538.74Show/hide
Query:  FPRPELCTGPCRLSPRSSNPRTTMPLQVYSRRNTEKDKQVQESEYISGTEIEEKNVSNESDIIVSTNDESYMNLPIALRNEKRTCTQYPLSHFVSYDKLS
        F  PE    P  +  R      + PL+VYSRR      Q       + T   +K   N++  I + ND S ++LPIALR EKR CTQ+PLS+FVS+D LS
Subjt:  FPRPELCTGPCRLSPRSSNPRTTMPLQVYSRRNTEKDKQVQESEYISGTEIEEKNVSNESDIIVSTNDESYMNLPIALRNEKRTCTQYPLSHFVSYDKLS

Query:  SQYRSFMVNLT
          Y++ +  L+
Subjt:  SQYRSFMVNLT

TrEMBL top hitse value%identityAlignment
A0A438D633 Retrovirus-related Pol polyprotein from transposon TNT 1-943.9e-0536.63Show/hide
Query:  SSNPRTTMPLQVYSRRNTEK----DKQVQESEYISGTEIEEKNVSNESDIIVSTNDESYMNLPIALRNEKRTCTQYPLSHFVSYDKLSSQYRSFMVNLTQ
        S+     + L VYSRR   +    D  + E    S    E  + S +   +  T ++ YM  PIALR   R+CTQ+P+S+F+SYD+LSS+Y +F+ NL+ 
Subjt:  SSNPRTTMPLQVYSRRNTEK----DKQVQESEYISGTEIEEKNVSNESDIIVSTNDESYMNLPIALRNEKRTCTQYPLSHFVSYDKLSSQYRSFMVNLTQ

Query:  V
        +
Subjt:  V

A0A438H504 Uncharacterized protein7.9e-0638.74Show/hide
Query:  FPRPELCTGPCRLSPRSSNPRTTMPLQVYSRRNTEKDKQVQESEYISGTEIEEKNVSNESDIIVSTNDESYMNLPIALRNEKRTCTQYPLSHFVSYDKLS
        F  PE    P  +  R      + PL+VYSRR      Q       + T   +K   N++  I + ND S ++LPIALR EKR CTQ+PLS+FVS+D LS
Subjt:  FPRPELCTGPCRLSPRSSNPRTTMPLQVYSRRNTEKDKQVQESEYISGTEIEEKNVSNESDIIVSTNDESYMNLPIALRNEKRTCTQYPLSHFVSYDKLS

Query:  SQYRSFMVNLT
          Y++ +  L+
Subjt:  SQYRSFMVNLT

A0A5B7BRM6 Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment)2.3e-0539.77Show/hide
Query:  LQVYSRRNTEKDKQVQESEYISGTEIEEKNVSNESDIIVSTNDESYMNLPIALRNEKRTCTQYPLSHFVSYDKLSSQYRSFMVNLTQV
        L+ Y+R   E+   V  S+  S   +    + +  ++I   ND    NLPIA+R   RTCTQ+P+S FVSYD LS  YR+F+ +L+ V
Subjt:  LQVYSRRNTEKDKQVQESEYISGTEIEEKNVSNESDIIVSTNDESYMNLPIALRNEKRTCTQYPLSHFVSYDKLSSQYRSFMVNLTQV

A0A6V7PJR3 Uncharacterized protein8.7e-0540.3Show/hide
Query:  SGTEIEEKNVSNESDIIVSTNDESYMNLPIALRNEKRTCTQYPLSHFVSYDKLSSQYRSFMVNLTQV
        + +E    N+SN  D I    +   +N+PIA R   R+CTQ+P+ +F+SYDKLS  +R+F  N+T++
Subjt:  SGTEIEEKNVSNESDIIVSTNDESYMNLPIALRNEKRTCTQYPLSHFVSYDKLSSQYRSFMVNLTQV

A5C483 Reverse transcriptase Ty1/copia-type domain-containing protein2.7e-0640.82Show/hide
Query:  RSSNPRTTMPLQVYSRRNTEKDKQVQESEYISGTEIEEKNVSNESDIIVSTNDESYMNLPIALRNEKRTCTQYPLSHFVSYDKLSSQYRSFMVNLTQV
        R      + PL+VYSRR      Q       + T   +K + N++  I + ND S ++LPI LR EKR CTQ+PLS+FVS++ LSS YR+F+  L+ +
Subjt:  RSSNPRTTMPLQVYSRRNTEKDKQVQESEYISGTEIEEKNVSNESDIIVSTNDESYMNLPIALRNEKRTCTQYPLSHFVSYDKLSSQYRSFMVNLTQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAGTTCGATCTGATTGTGGTTCAATCTACTCAGAACCCGACAGGTCCACTCTTGAGTTCAGGTCGAGCCGGGGACCGGGTTGGAGCTTGGGGTGACGAGATAAC
CCCAAGTTTGGACTGCAATTCACAGAGACGAGAATTGGGAAGTCTCTTGGCCATGGTATATTGTTCCCTTGAGATACCAGATGAATTTTTTGACAGCCTGCCAATGAATG
TTAGTTGGCCATTGAAGAAATTAACTCAACCGATTATTGATCAAGGAGATGTTGAGGCGTGTTTGAGTAAGATATTGAAGAGCCCCAATGGCATGTCTGTAAACTATACC
GACCTCCCTCTACAACGCTTGGTGTTCGACCTTGCCATTTATTCCCAAGGTCTAGAACTGTTACTCAAACTTGAAGTTCGACCTTGCCGTTTATCCCCAAGGTCTAGAAC
GGTGCACCAGTCCTTGACATTTATCCCCAAGATGCCGGGATCAAAAACTGCTGCTGTCCGGACTATTTTAGTAGTAAAAATTCACCAAAACGATGCTCACGACGCGGTGT
GCAGCAAGAACCCGTGCCACGACCTGCTGCTATCGGAATCCACGCACCACCGCTGCTACCCGACGCCGGTGCACCGCTGCTGCCGACGCCCGCGCACCGCTGCTGCCCGA
CGTCCGCGAACTGCTGCTGCCCGTCACCCACGCACACCTGCTCGTTGCTGCCCAACGCCGCACACCGCACTGCCCGGTGGTCGCCGTCCGTCGAGTGTTTCGGGGAGGGT
TGAGGCGCCGATAAAAGAAAGAAAACGAAAACTAAAACGGGGAGGGGAAGAAGAGATTGGCGAAATTAAGGATGGAGATGGATTGGGTACTGTAGGTTGTGGTAAAGGTA
TGGTTTGGGTTTGTAGTGTGGGAATAGATGAGGTTGTTGAGGAGGATGCCACTGGCAAGGATGTTAAAGAAGGAGTGCTCACTAGAATGCTACTCTATTGCAAGAATGGT
GGAGATGGTGGAGATAGTGGCGAACAAGTATTGGTGCCGTCGTTGCCGTCGCTATTCATACACCGCCGTCACCACCGTTCGAAGTCTGCATCGCTGCAGCTATTCGATCA
CTGTTTTTCCGCCAAGGTCTTATTCGCCGCCGGTTGTTCAGTAGTTGGAGTTGTCATCAGAAGCAGCCGTCGTCGGGTTCTGGGTGTGCCGTTCGTGGTCATCGAATTTT
CTGTGTTCGTGCCTGCTAGGTATTTCTCTCTCAAAGAGTGGCGGCTAGGGTTTAAAAGAGAACTAAACATTGCTTGGTTCAGTTCACGGATTGTGACGCCCCAAGATGTT
ATATACCATCCTAGATACCGCCCCCCTCCTTTTACAGTACTTGATGTTCGACCTTGCCATTTATTCCCAAGGCCTAGCACTACTACTTCGCAAGCACCACTCTACTTTAG
TCCTTCAAGCCTAACTCCTCGAGTCGCATTGGCCCTTGACATTTATCCCCAAGGCCTCAATACTCCTCTACAGAAACTTGATGTTCGGCCTTGCCATTTATTCCCAAGGC
CTGAACTGTGCACCGGTCCTTGCCGTTTATCCCCAAGATCATCTAATCCTCGTACTACTATGCCATTACAGGTTTATTCAAGAAGGAACACTGAAAAAGATAAGCAAGTC
CAAGAGTCTGAATATATCTCTGGAACTGAAATTGAGGAGAAAAATGTCAGTAATGAGTCTGACATAATAGTATCCACTAATGATGAATCATATATGAATTTGCCTATTGC
TTTAAGGAACGAAAAACGAACTTGTACTCAATATCCATTATCTCACTTTGTATCCTATGACAAACTCTCAAGTCAGTATAGAAGTTTTATGGTAAATCTTACTCAGGTCT
TCCCATCGTCTTTCGGGTCGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAAGTTCGATCTGATTGTGGTTCAATCTACTCAGAACCCGACAGGTCCACTCTTGAGTTCAGGTCGAGCCGGGGACCGGGTTGGAGCTTGGGGTGACGAGATAAC
CCCAAGTTTGGACTGCAATTCACAGAGACGAGAATTGGGAAGTCTCTTGGCCATGGTATATTGTTCCCTTGAGATACCAGATGAATTTTTTGACAGCCTGCCAATGAATG
TTAGTTGGCCATTGAAGAAATTAACTCAACCGATTATTGATCAAGGAGATGTTGAGGCGTGTTTGAGTAAGATATTGAAGAGCCCCAATGGCATGTCTGTAAACTATACC
GACCTCCCTCTACAACGCTTGGTGTTCGACCTTGCCATTTATTCCCAAGGTCTAGAACTGTTACTCAAACTTGAAGTTCGACCTTGCCGTTTATCCCCAAGGTCTAGAAC
GGTGCACCAGTCCTTGACATTTATCCCCAAGATGCCGGGATCAAAAACTGCTGCTGTCCGGACTATTTTAGTAGTAAAAATTCACCAAAACGATGCTCACGACGCGGTGT
GCAGCAAGAACCCGTGCCACGACCTGCTGCTATCGGAATCCACGCACCACCGCTGCTACCCGACGCCGGTGCACCGCTGCTGCCGACGCCCGCGCACCGCTGCTGCCCGA
CGTCCGCGAACTGCTGCTGCCCGTCACCCACGCACACCTGCTCGTTGCTGCCCAACGCCGCACACCGCACTGCCCGGTGGTCGCCGTCCGTCGAGTGTTTCGGGGAGGGT
TGAGGCGCCGATAAAAGAAAGAAAACGAAAACTAAAACGGGGAGGGGAAGAAGAGATTGGCGAAATTAAGGATGGAGATGGATTGGGTACTGTAGGTTGTGGTAAAGGTA
TGGTTTGGGTTTGTAGTGTGGGAATAGATGAGGTTGTTGAGGAGGATGCCACTGGCAAGGATGTTAAAGAAGGAGTGCTCACTAGAATGCTACTCTATTGCAAGAATGGT
GGAGATGGTGGAGATAGTGGCGAACAAGTATTGGTGCCGTCGTTGCCGTCGCTATTCATACACCGCCGTCACCACCGTTCGAAGTCTGCATCGCTGCAGCTATTCGATCA
CTGTTTTTCCGCCAAGGTCTTATTCGCCGCCGGTTGTTCAGTAGTTGGAGTTGTCATCAGAAGCAGCCGTCGTCGGGTTCTGGGTGTGCCGTTCGTGGTCATCGAATTTT
CTGTGTTCGTGCCTGCTAGGTATTTCTCTCTCAAAGAGTGGCGGCTAGGGTTTAAAAGAGAACTAAACATTGCTTGGTTCAGTTCACGGATTGTGACGCCCCAAGATGTT
ATATACCATCCTAGATACCGCCCCCCTCCTTTTACAGTACTTGATGTTCGACCTTGCCATTTATTCCCAAGGCCTAGCACTACTACTTCGCAAGCACCACTCTACTTTAG
TCCTTCAAGCCTAACTCCTCGAGTCGCATTGGCCCTTGACATTTATCCCCAAGGCCTCAATACTCCTCTACAGAAACTTGATGTTCGGCCTTGCCATTTATTCCCAAGGC
CTGAACTGTGCACCGGTCCTTGCCGTTTATCCCCAAGATCATCTAATCCTCGTACTACTATGCCATTACAGGTTTATTCAAGAAGGAACACTGAAAAAGATAAGCAAGTC
CAAGAGTCTGAATATATCTCTGGAACTGAAATTGAGGAGAAAAATGTCAGTAATGAGTCTGACATAATAGTATCCACTAATGATGAATCATATATGAATTTGCCTATTGC
TTTAAGGAACGAAAAACGAACTTGTACTCAATATCCATTATCTCACTTTGTATCCTATGACAAACTCTCAAGTCAGTATAGAAGTTTTATGGTAAATCTTACTCAGGTCT
TCCCATCGTCTTTCGGGTCGGAGTGA
Protein sequenceShow/hide protein sequence
MSKFDLIVVQSTQNPTGPLLSSGRAGDRVGAWGDEITPSLDCNSQRRELGSLLAMVYCSLEIPDEFFDSLPMNVSWPLKKLTQPIIDQGDVEACLSKILKSPNGMSVNYT
DLPLQRLVFDLAIYSQGLELLLKLEVRPCRLSPRSRTVHQSLTFIPKMPGSKTAAVRTILVVKIHQNDAHDAVCSKNPCHDLLLSESTHHRCYPTPVHRCCRRPRTAAAR
RPRTAAARHPRTPARCCPTPHTALPGGRRPSSVSGRVEAPIKERKRKLKRGGEEEIGEIKDGDGLGTVGCGKGMVWVCSVGIDEVVEEDATGKDVKEGVLTRMLLYCKNG
GDGGDSGEQVLVPSLPSLFIHRRHHRSKSASLQLFDHCFSAKVLFAAGCSVVGVVIRSSRRRVLGVPFVVIEFSVFVPARYFSLKEWRLGFKRELNIAWFSSRIVTPQDV
IYHPRYRPPPFTVLDVRPCHLFPRPSTTTSQAPLYFSPSSLTPRVALALDIYPQGLNTPLQKLDVRPCHLFPRPELCTGPCRLSPRSSNPRTTMPLQVYSRRNTEKDKQV
QESEYISGTEIEEKNVSNESDIIVSTNDESYMNLPIALRNEKRTCTQYPLSHFVSYDKLSSQYRSFMVNLTQVFPSSFGSE