; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc07g10430 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g10430
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr7:8028582..8032947
RNA-Seq ExpressionMoc07g10430
SyntenyMoc07g10430
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CCA66044.1 hypothetical protein [Beta vulgaris subsp. vulgaris]3.2e-1342Show/hide
Query:  DVLETTIQGDWLLK--------GDRNTKWFHLRASQRKKSNRIRGFYDESDNWCSQEEDVEMIAYSYFTQIFLSSNPSSQDMGPVLDSISPKLSEEQNMW
        D L    +  W L+        GDRNTK+FH +ASQRKK N ++G +D S  WC + +D+E +   YFT IF S+NPS   +  VL  + P ++EE N W
Subjt:  DVLETTIQGDWLLK--------GDRNTKWFHLRASQRKKSNRIRGFYDESDNWCSQEEDVEMIAYSYFTQIFLSSNPSSQDMGPVLDSISPKLSEEQNMW

PON35073.1 Endonuclease/exonuclease/phosphatase, partial [Parasponia andersonii]3.5e-1237.4Show/hide
Query:  LRTFGSLLENVRISSKEYGADRGGRDVLETTIQGDWLLKGDRNTKWFHLRASQRKKSNRIRGFYDESDNWCSQEEDVEMIAYSYFTQIFLSSNPSSQDMG
        +R+    LE + I  ++Y   RG         + DWL  GD NTK+FH +A  RKK N IRG  DE+  WC+  ED+  +  +YF+ IF + +PS ++M 
Subjt:  LRTFGSLLENVRISSKEYGADRGGRDVLETTIQGDWLLKGDRNTKWFHLRASQRKKSNRIRGFYDESDNWCSQEEDVEMIAYSYFTQIFLSSNPSSQDMG

Query:  PVLDSISPKLSEEQNMWPSRFSQ
         V   I P++    N   SR SQ
Subjt:  PVLDSISPKLSEEQNMWPSRFSQ

XP_015382608.1 uncharacterized protein LOC107175577 [Citrus sinensis]2.0e-1234.31Show/hide
Query:  LADWLGVGVINEKKRKGVDLVGLRTFGSLLENVRISSKEYGADRGGRDVLETTIQGDWLLKGDRNTKWFHLRASQRKKSNRIRGFYDESDNWCSQEEDVE
        L  W   GV  E +++      ++   + ++N+ I  + Y   R          + DWL +GD+NTK+FH +AS RKK NRI G  + S +W  + +DVE
Subjt:  LADWLGVGVINEKKRKGVDLVGLRTFGSLLENVRISSKEYGADRGGRDVLETTIQGDWLLKGDRNTKWFHLRASQRKKSNRIRGFYDESDNWCSQEEDVE

Query:  MIAYSYFTQIFLSSNPSSQDMGPVLDSISPKLSEEQN
            +YFT++F ++ PS   M  VL  I+P++SE+ N
Subjt:  MIAYSYFTQIFLSSNPSSQDMGPVLDSISPKLSEEQN

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]2.3e-4046.7Show/hide
Query:  VETVTHLFWECKIDSQSGRS--NRKFKVKTKWVSPPLHTWTLNTDASWSESLQRGGLGWVLRNWDREVIRVGNRFVDFCSSMNLIKANAILEGMHCL-KF
        ++ +T    E    S++  S  ++    K KW  PP+H WTLN DASWS+S  RGG+GW++R+WD +++  GNRFV+ C+++ L++A+AILEG+  L   
Subjt:  VETVTHLFWECKIDSQSGRS--NRKFKVKTKWVSPPLHTWTLNTDASWSESLQRGGLGWVLRNWDREVIRVGNRFVDFCSSMNLIKANAILEGMHCL-KF

Query:  GVSFPICVETYSEVVANLLNEVGEDLTEVGGVVEEILKLRDCSGVTCFVKVNREANHCTHSLAKRVARSLERESWNDCIPNW
        GV  P+ +ET S  V +LLN   EDLT+ G VVEEIL LRD   +  F KV RE N C HSLA+R +   E   W DC PNW
Subjt:  GVSFPICVETYSEVVANLLNEVGEDLTEVGGVVEEILKLRDCSGVTCFVKVNREANHCTHSLAKRVARSLERESWNDCIPNW

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]1.2e-1235.03Show/hide
Query:  DSAKMETGISKIQASLDIRHLDFLASDHRPILADWLGVGVINEKKRKGVDLVGLRTFGSLLENVRISSKEYGADRGGRDVLETTIQG------DWLLKGD
        D   + T I +IQ +L+IRHL+FLASDHRPILA+WLGVG     +RKG             +  +   +   A +G  D+  T  QG      + L+K +
Subjt:  DSAKMETGISKIQASLDIRHLDFLASDHRPILADWLGVGVINEKKRKGVDLVGLRTFGSLLENVRISSKEYGADRGGRDVLETTIQG------DWLLKGD

Query:  RNTKWFHLRASQRKKSNRIRGFYDES-----DNWCSQEEDVEMIAYSYFTQIFLSSNPSSQDMGPVLDSISPKLSEE
               LR +  +K   I+    +      DN    + D+E +      + +   +PS+QDMGPVLDSI+PKL+EE
Subjt:  RNTKWFHLRASQRKKSNRIRGFYDES-----DNWCSQEEDVEMIAYSYFTQIFLSSNPSSQDMGPVLDSISPKLSEE

TrEMBL top hitse value%identityAlignment
A0A2N9GC56 Reverse transcriptase domain-containing protein9.0e-1437.96Show/hide
Query:  ENVRISSKEYGADRGGRDVL-ETTIQGDWLLKGDRNTKWFHLRASQRKKSNRIRGFYDESDNWCSQEEDVEMIAYSYFTQIFLSSNPSSQDMGPVLDSIS
        E +    KE  A  G  +++     +  WL +GDRNTK+FH+RA+QRK+ N + G +D +  W + ++D+  +   YF  IF +S+P+  +M  VLD +S
Subjt:  ENVRISSKEYGADRGGRDVL-ETTIQGDWLLKGDRNTKWFHLRASQRKKSNRIRGFYDESDNWCSQEEDVEMIAYSYFTQIFLSSNPSSQDMGPVLDSIS

Query:  PKLSEEQN
        PK++EE N
Subjt:  PKLSEEQN

A0A2P5AEV8 Endonuclease/exonuclease/phosphatase (Fragment)1.7e-1237.4Show/hide
Query:  LRTFGSLLENVRISSKEYGADRGGRDVLETTIQGDWLLKGDRNTKWFHLRASQRKKSNRIRGFYDESDNWCSQEEDVEMIAYSYFTQIFLSSNPSSQDMG
        +R+    LE + I  ++Y   RG         + DWL  GD NTK+FH +A  RKK N IRG  DE+  WC+  ED+  +  +YF+ IF + +PS ++M 
Subjt:  LRTFGSLLENVRISSKEYGADRGGRDVLETTIQGDWLLKGDRNTKWFHLRASQRKKSNRIRGFYDESDNWCSQEEDVEMIAYSYFTQIFLSSNPSSQDMG

Query:  PVLDSISPKLSEEQNMWPSRFSQ
         V   I P++    N   SR SQ
Subjt:  PVLDSISPKLSEEQNMWPSRFSQ

A0A6J1DNV9 uncharacterized protein LOC1110224031.1e-4046.7Show/hide
Query:  VETVTHLFWECKIDSQSGRS--NRKFKVKTKWVSPPLHTWTLNTDASWSESLQRGGLGWVLRNWDREVIRVGNRFVDFCSSMNLIKANAILEGMHCL-KF
        ++ +T    E    S++  S  ++    K KW  PP+H WTLN DASWS+S  RGG+GW++R+WD +++  GNRFV+ C+++ L++A+AILEG+  L   
Subjt:  VETVTHLFWECKIDSQSGRS--NRKFKVKTKWVSPPLHTWTLNTDASWSESLQRGGLGWVLRNWDREVIRVGNRFVDFCSSMNLIKANAILEGMHCL-KF

Query:  GVSFPICVETYSEVVANLLNEVGEDLTEVGGVVEEILKLRDCSGVTCFVKVNREANHCTHSLAKRVARSLERESWNDCIPNW
        GV  P+ +ET S  V +LLN   EDLT+ G VVEEIL LRD   +  F KV RE N C HSLA+R +   E   W DC PNW
Subjt:  GVSFPICVETYSEVVANLLNEVGEDLTEVGGVVEEILKLRDCSGVTCFVKVNREANHCTHSLAKRVARSLERESWNDCIPNW

A0A6J1DRA0 uncharacterized protein LOC1110224235.8e-1335.03Show/hide
Query:  DSAKMETGISKIQASLDIRHLDFLASDHRPILADWLGVGVINEKKRKGVDLVGLRTFGSLLENVRISSKEYGADRGGRDVLETTIQG------DWLLKGD
        D   + T I +IQ +L+IRHL+FLASDHRPILA+WLGVG     +RKG             +  +   +   A +G  D+  T  QG      + L+K +
Subjt:  DSAKMETGISKIQASLDIRHLDFLASDHRPILADWLGVGVINEKKRKGVDLVGLRTFGSLLENVRISSKEYGADRGGRDVLETTIQG------DWLLKGD

Query:  RNTKWFHLRASQRKKSNRIRGFYDES-----DNWCSQEEDVEMIAYSYFTQIFLSSNPSSQDMGPVLDSISPKLSEE
               LR +  +K   I+    +      DN    + D+E +      + +   +PS+QDMGPVLDSI+PKL+EE
Subjt:  RNTKWFHLRASQRKKSNRIRGFYDES-----DNWCSQEEDVEMIAYSYFTQIFLSSNPSSQDMGPVLDSISPKLSEE

F4NCJ0 Reverse transcriptase domain-containing protein1.5e-1342Show/hide
Query:  DVLETTIQGDWLLK--------GDRNTKWFHLRASQRKKSNRIRGFYDESDNWCSQEEDVEMIAYSYFTQIFLSSNPSSQDMGPVLDSISPKLSEEQNMW
        D L    +  W L+        GDRNTK+FH +ASQRKK N ++G +D S  WC + +D+E +   YFT IF S+NPS   +  VL  + P ++EE N W
Subjt:  DVLETTIQGDWLLK--------GDRNTKWFHLRASQRKKSNRIRGFYDESDNWCSQEEDVEMIAYSYFTQIFLSSNPSSQDMGPVLDSISPKLSEEQNMW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.9e-0430.21Show/hide
Query:  VKTKWVSPPLHTWTLNTDASWSESLQRGGLGWVLRNWDREVIRVGNRFVDFCSSMNLIKANAILEGMHCLKFGVS----FPICVETYSEVVANLLN
        +  +W +PP      NTDA+W     R G+GW+LRN    V+ +G R +    + N+++A   LE +      +S      I  E+ ++ + NLLN
Subjt:  VKTKWVSPPLHTWTLNTDASWSESLQRGGLGWVLRNWDREVIRVGNRFVDFCSSMNLIKANAILEGMHCLKFGVS----FPICVETYSEVVANLLN

AT4G29090.1 Ribonuclease H-like superfamily protein1.2e-0729.56Show/hide
Query:  PPLHTWT-LNTDASWSESLQRGGLGWVLRNWDREVIRVGNRFVDFCSSMNLIKANAILEGMHCL-KFGVSFPICVETYSEVVANLLNEVGEDLTEVGGVV
        PP H W   NTDA+W+   +R G+GWVLRN   EV  +G R +    S+   +  A+   +  L +F  ++ +  E+ S+V+  +LN   E    +   +
Subjt:  PPLHTWT-LNTDASWSESLQRGGLGWVLRNWDREVIRVGNRFVDFCSSMNLIKANAILEGMHCL-KFGVSFPICVETYSEVVANLLNEVGEDLTEVGGVV

Query:  EEILKLRDCSGVTCFVKVNREANHCTHSLAKRVAR-SLERESWN----DCIPNWTNQDL
        +++ +L        FV + RE N    +LA+RVAR SL   +++      +P+W    +
Subjt:  EEILKLRDCSGVTCFVKVNREANHCTHSLAKRVAR-SLERESWN----DCIPNWTNQDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGGATCAGTGATACGAATACGACATCGGAGCATTGTTCCGATCAGGCAGCGGCGGTAGGAGATGGGCGGGATTACAATTTGGAAAAGAATCAATCAACG
GTGCCTCATACATTGAGCATTAATAAGGAAAATCAAATAGGGAAAGAATTTTCAAAGATTTCAACGCCCGATGCCTCAATGACGGAACGACTAAAAAGAGGTAAA
TCTGCATTAAATTCTGATTTGGTGGGACCAAAGGAGGGATTGGAGTCAATAAAGGAATTGAAGGAAAAGATTATATTGGGAGGAAAGAGAAATGAGATGGCTGAT
GGTTGTGGAAGAATTCAGAATGATTCTGCTAAGATGGAAACTGGGATATCAAAGATACAGGCTTCGTTGGACATTCGTCACTTGGATTTCTTAGCTTCGGATCAT
AGGCCAATTTTAGCTGACTGGTTGGGTGTTGGTGTGATCAATGAGAAGAAAAGAAAGGGGGTAGACCTCGTCGGTTTGAGGACATTTGGCTCTCTTTTGGAGAAT
GTAAGGATATCATCAAAAGAGTATGGAGCTGATAGAGGAGGACGAGATGTATTGGAGACAACGATCCAGGGAGACTGGCTACTGAAGGGCGATAGGAATACGAAA
TGGTTTCATCTGAGAGCCAGTCAAAGGAAGAAGTCTAATAGAATAAGGGGGTTCTATGATGAGTCAGACAATTGGTGCAGTCAGGAGGAAGATGTTGAAATGATT
GCCTATTCTTATTTCACTCAGATCTTCTTGTCGAGCAATCCTAGTTCCCAAGATATGGGACCAGTTTTGGACTCCATCTCGCCGAAGCTTTCGGAGGAGCAGAAC
ATGTGGCCATCGAGGTTTTCACAGAGGAGGAGATTAGCAGAAGTCAGTGTGCAGTATTCAGCTCCTTGGTTGAAAGAGTGTGGAAGAAACTTCAAGGATGGAAAG
GGAAAGGGAAGCTCTTCTCGTTGGGCGGCAAGGAGTGAAAATTGCTTATCAGTTGGGTTTGCAAAGGGAAGTAATCTTGTCGGCTTCCTCTTCAAATTCAAACTT
GCAATCCGAGCGTTGGAAGCGGTTCTGGAAGACAAGAATAACCCGAATCATGTAGAGACCGTGACTCACTTATTTTGGGAGTGCAAGATAGATTCTCAATCGGGC
AGATCGAATAGGAAATTCAAAGTCAAAACGAAATGGGTTTCCCCTCCTCTTCATACCTGGACTCTCAATACCGACGCCTCTTGGTCGGAATCTCTTCAACGGGGC
GGTTTGGGGTGGGTGCTCCGCAACTGGGACAGAGAAGTCATCCGAGTCGGTAATCGTTTTGTGGATTTTTGCAGTAGTATGAATTTAATCAAAGCAAACGCGATT
TTGGAGGGGATGCATTGTCTGAAATTTGGCGTGTCCTTCCCAATATGTGTGGAGACATATTCGGAGGTTGTTGCAAATTTGCTGAATGAGGTGGGCGAAGATCTC
ACGGAAGTTGGAGGAGTTGTTGAGGAAATCCTAAAATTGAGGGATTGTAGTGGGGTTACGTGTTTTGTGAAAGTGAATAGAGAGGCTAATCACTGTACACATTCA
CTTGCTAAGAGGGTTGCTAGATCTTTGGAGAGGGAGAGTTGGAACGATTGTATCCCTAATTGGACCAATCAGGATTTACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGGATCAGTGATACGAATACGACATCGGAGCATTGTTCCGATCAGGCAGCGGCGGTAGGAGATGGGCGGGATTACAATTTGGAAAAGAATCAATCAACG
GTGCCTCATACATTGAGCATTAATAAGGAAAATCAAATAGGGAAAGAATTTTCAAAGATTTCAACGCCCGATGCCTCAATGACGGAACGACTAAAAAGAGGTAAA
TCTGCATTAAATTCTGATTTGGTGGGACCAAAGGAGGGATTGGAGTCAATAAAGGAATTGAAGGAAAAGATTATATTGGGAGGAAAGAGAAATGAGATGGCTGAT
GGTTGTGGAAGAATTCAGAATGATTCTGCTAAGATGGAAACTGGGATATCAAAGATACAGGCTTCGTTGGACATTCGTCACTTGGATTTCTTAGCTTCGGATCAT
AGGCCAATTTTAGCTGACTGGTTGGGTGTTGGTGTGATCAATGAGAAGAAAAGAAAGGGGGTAGACCTCGTCGGTTTGAGGACATTTGGCTCTCTTTTGGAGAAT
GTAAGGATATCATCAAAAGAGTATGGAGCTGATAGAGGAGGACGAGATGTATTGGAGACAACGATCCAGGGAGACTGGCTACTGAAGGGCGATAGGAATACGAAA
TGGTTTCATCTGAGAGCCAGTCAAAGGAAGAAGTCTAATAGAATAAGGGGGTTCTATGATGAGTCAGACAATTGGTGCAGTCAGGAGGAAGATGTTGAAATGATT
GCCTATTCTTATTTCACTCAGATCTTCTTGTCGAGCAATCCTAGTTCCCAAGATATGGGACCAGTTTTGGACTCCATCTCGCCGAAGCTTTCGGAGGAGCAGAAC
ATGTGGCCATCGAGGTTTTCACAGAGGAGGAGATTAGCAGAAGTCAGTGTGCAGTATTCAGCTCCTTGGTTGAAAGAGTGTGGAAGAAACTTCAAGGATGGAAAG
GGAAAGGGAAGCTCTTCTCGTTGGGCGGCAAGGAGTGAAAATTGCTTATCAGTTGGGTTTGCAAAGGGAAGTAATCTTGTCGGCTTCCTCTTCAAATTCAAACTT
GCAATCCGAGCGTTGGAAGCGGTTCTGGAAGACAAGAATAACCCGAATCATGTAGAGACCGTGACTCACTTATTTTGGGAGTGCAAGATAGATTCTCAATCGGGC
AGATCGAATAGGAAATTCAAAGTCAAAACGAAATGGGTTTCCCCTCCTCTTCATACCTGGACTCTCAATACCGACGCCTCTTGGTCGGAATCTCTTCAACGGGGC
GGTTTGGGGTGGGTGCTCCGCAACTGGGACAGAGAAGTCATCCGAGTCGGTAATCGTTTTGTGGATTTTTGCAGTAGTATGAATTTAATCAAAGCAAACGCGATT
TTGGAGGGGATGCATTGTCTGAAATTTGGCGTGTCCTTCCCAATATGTGTGGAGACATATTCGGAGGTTGTTGCAAATTTGCTGAATGAGGTGGGCGAAGATCTC
ACGGAAGTTGGAGGAGTTGTTGAGGAAATCCTAAAATTGAGGGATTGTAGTGGGGTTACGTGTTTTGTGAAAGTGAATAGAGAGGCTAATCACTGTACACATTCA
CTTGCTAAGAGGGTTGCTAGATCTTTGGAGAGGGAGAGTTGGAACGATTGTATCCCTAATTGGACCAATCAGGATTTACTTTGA
Protein sequenceShow/hide protein sequence
MRGISDTNTTSEHCSDQAAAVGDGRDYNLEKNQSTVPHTLSINKENQIGKEFSKISTPDASMTERLKRGKSALNSDLVGPKEGLESIKELKEKIILGGKRNEMAD
GCGRIQNDSAKMETGISKIQASLDIRHLDFLASDHRPILADWLGVGVINEKKRKGVDLVGLRTFGSLLENVRISSKEYGADRGGRDVLETTIQGDWLLKGDRNTK
WFHLRASQRKKSNRIRGFYDESDNWCSQEEDVEMIAYSYFTQIFLSSNPSSQDMGPVLDSISPKLSEEQNMWPSRFSQRRRLAEVSVQYSAPWLKECGRNFKDGK
GKGSSSRWAARSENCLSVGFAKGSNLVGFLFKFKLAIRALEAVLEDKNNPNHVETVTHLFWECKIDSQSGRSNRKFKVKTKWVSPPLHTWTLNTDASWSESLQRG
GLGWVLRNWDREVIRVGNRFVDFCSSMNLIKANAILEGMHCLKFGVSFPICVETYSEVVANLLNEVGEDLTEVGGVVEEILKLRDCSGVTCFVKVNREANHCTHS
LAKRVARSLERESWNDCIPNWTNQDLL