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Moc07g10460 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g10460
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr7:8039410..8041543
RNA-Seq ExpressionMoc07g10460
SyntenyMoc07g10460
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008222401.1 PREDICTED: uncharacterized protein LOC103322272 [Prunus mume]3.1e-0857.41Show/hide
Query:  MDPIKHFLTSGLTPADQSQARKLRRKVAHYIIQEGKLYKRGYSLPLLWCLDPEE
        MDPI  FL +   PAD ++AR++R + A Y+I  G LYKRG+SLP LWCL PEE
Subjt:  MDPIKHFLTSGLTPADQSQARKLRRKVAHYIIQEGKLYKRGYSLPLLWCLDPEE
XP_016652663.1 PREDICTED: uncharacterized protein LOC107880143 [Prunus mume]7.0e-0849.15Show/hide
Query:  MDPIKHFLTSGLTPADQSQARKLRRKVAHYIIQEGKLYKRGYSLPLLWCLDPEEARATI
        MDPI+ +LT G  P D+++AR++R + + Y+I   KLYKRG+SLP L CL P+EA + +
Subjt:  MDPIKHFLTSGLTPADQSQARKLRRKVAHYIIQEGKLYKRGYSLPLLWCLDPEEARATI
XP_022156271.1 uncharacterized protein LOC111023203 [Momordica charantia]1.4e-1167.24Show/hide
Query:  MDPIKHFLTSGLTPADQSQARKLRRKVAHYIIQEGKLYKRGYSLPLLWCLDPEEARAT
        MD IK+FL SG  P D SQARKLR + AHY++QE KL+KRGYSLPLL CLDPE A ++
Subjt:  MDPIKHFLTSGLTPADQSQARKLRRKVAHYIIQEGKLYKRGYSLPLLWCLDPEEARAT
XP_022156986.1 uncharacterized protein LOC111023816 [Momordica charantia]7.0e-1678.57Show/hide
Query:  MDPIKHFLTSGLTPADQSQARKLRRKVAHYIIQEGKLYKRGYSLPLLWCLDPEEAR
        MDPIK FL +G  PAD SQARKLRR+ AHY++QEGKL+KRGYSLPLL CLDPEEAR
Subjt:  MDPIKHFLTSGLTPADQSQARKLRRKVAHYIIQEGKLYKRGYSLPLLWCLDPEEAR
XP_022158215.1 uncharacterized protein LOC111024751 [Momordica charantia]9.1e-1678.57Show/hide
Query:  MDPIKHFLTSGLTPADQSQARKLRRKVAHYIIQEGKLYKRGYSLPLLWCLDPEEAR
        MDPIK FL +G  PAD SQARKLRR+ AHY++QEGKL+KRGYSLPLL CLDPEEAR
Subjt:  MDPIKHFLTSGLTPADQSQARKLRRKVAHYIIQEGKLYKRGYSLPLLWCLDPEEAR
TrEMBL top hitse value%identityAlignment
A0A151RKL5 Ribonuclease H1.7e-0750Show/hide
Query:  DPIKHFLTSGLTPADQSQARKLRRKVAHYIIQEGKLYKRGYSLPLLWCLDPEEA
        D +K FLT+ +TPA+ ++A++LR + + Y++  G+LYKRG+S PLL CL+P+EA
Subjt:  DPIKHFLTSGLTPADQSQARKLRRKVAHYIIQEGKLYKRGYSLPLLWCLDPEEA
A0A6J1DKR2 uncharacterized protein LOC1110218251.7e-0754.39Show/hide
Query:  PIKHFLTSGLTPADQSQARKLRRKVAHYIIQEGKLYKRGYSLPLLWCLDPEEARATI
        P++    S +   +  +ARKLRR+  HY++ EGKL+KRGYSLPLL  LDPEEAR  I
Subjt:  PIKHFLTSGLTPADQSQARKLRRKVAHYIIQEGKLYKRGYSLPLLWCLDPEEARATI
A0A6J1DUF4 uncharacterized protein LOC1110232036.6e-1267.24Show/hide
Query:  MDPIKHFLTSGLTPADQSQARKLRRKVAHYIIQEGKLYKRGYSLPLLWCLDPEEARAT
        MD IK+FL SG  P D SQARKLR + AHY++QE KL+KRGYSLPLL CLDPE A ++
Subjt:  MDPIKHFLTSGLTPADQSQARKLRRKVAHYIIQEGKLYKRGYSLPLLWCLDPEEARAT
A0A6J1DV78 Ribonuclease H4.4e-1678.57Show/hide
Query:  MDPIKHFLTSGLTPADQSQARKLRRKVAHYIIQEGKLYKRGYSLPLLWCLDPEEAR
        MDPIK FL +G  PAD SQARKLRR+ AHY++QEGKL+KRGYSLPLL CLDPEEAR
Subjt:  MDPIKHFLTSGLTPADQSQARKLRRKVAHYIIQEGKLYKRGYSLPLLWCLDPEEAR
A0A6J1DWM2 Ribonuclease H3.4e-1678.57Show/hide
Query:  MDPIKHFLTSGLTPADQSQARKLRRKVAHYIIQEGKLYKRGYSLPLLWCLDPEEAR
        MDPIK FL +G  PAD SQARKLRR+ AHY++QEGKL+KRGYSLPLL CLDPEEAR
Subjt:  MDPIKHFLTSGLTPADQSQARKLRRKVAHYIIQEGKLYKRGYSLPLLWCLDPEEAR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCGATCAAACATTTTCTGACCAGTGGCTTAACTCCGGCAGATCAGAGCCAGGCCAGGAAGCTCCGACGAAAAGTGGCTCATTACATAATACAAGAGGGC
AAGCTCTACAAGAGGGGATACTCTTTACCGTTGTTGTGGTGCCTCGACCCAGAGGAGGCGAGGGCTACTATTGGCCAACGATTGACTGCGACACTAAGGAGTTCA
CAAAGGCGTGTGACAAGTGCCAGCGCTTCGCGAACATCCTGCGATAACCCCCAGAGATGGCGAGGTATATATGCTTCGGCTCAGTACACTGGTCATGTTAAAATT
GAGAGGAAAGCAACAGAAGGAAGAAAGGAAAGAGCTATTTTTCGGAAGCATCATCTCATCCGGCTTGCTGGCTCCAGCGTCGGCATTCACTGTCTCGGCTCCCTT
GCCAACGTCAGCAGGACGGTCGACCTAGATGGCCTCATAATTCTGCTCGGCGGCAGCGATGTCCTCCTCCGAGCAAGTGGTCTCGAGCTTCCCGATGGCATAGTA
GAAGCCCTTGTCTGCAAGGTCACGTGCAAGGCCATCAAATTCAGGGAACTCCTTCACCTTCTTTTCCAAATAGGCCCAACTCTTCATATTCTGCTGAGCTTCCCT
CCAGCCTTTCTCTGCAGTCTCGGCGCACCCTCTAACATTCTGCAGGTCGGCACGTGCTGGGCGATCACGGCTTGGGATCTGTCGACCTCAACTTCCTTCTCGGCT
CGGGCCTGCCCCACCTCTGCCTCAAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCCGATCAAACATTTTCTGACCAGTGGCTTAACTCCGGCAGATCAGAGCCAGGCCAGGAAGCTCCGACGAAAAGTGGCTCATTACATAATACAAGAGGGC
AAGCTCTACAAGAGGGGATACTCTTTACCGTTGTTGTGGTGCCTCGACCCAGAGGAGGCGAGGGCTACTATTGGCCAACGATTGACTGCGACACTAAGGAGTTCA
CAAAGGCGTGTGACAAGTGCCAGCGCTTCGCGAACATCCTGCGATAACCCCCAGAGATGGCGAGGTATATATGCTTCGGCTCAGTACACTGGTCATGTTAAAATT
GAGAGGAAAGCAACAGAAGGAAGAAAGGAAAGAGCTATTTTTCGGAAGCATCATCTCATCCGGCTTGCTGGCTCCAGCGTCGGCATTCACTGTCTCGGCTCCCTT
GCCAACGTCAGCAGGACGGTCGACCTAGATGGCCTCATAATTCTGCTCGGCGGCAGCGATGTCCTCCTCCGAGCAAGTGGTCTCGAGCTTCCCGATGGCATAGTA
GAAGCCCTTGTCTGCAAGGTCACGTGCAAGGCCATCAAATTCAGGGAACTCCTTCACCTTCTTTTCCAAATAGGCCCAACTCTTCATATTCTGCTGAGCTTCCCT
CCAGCCTTTCTCTGCAGTCTCGGCGCACCCTCTAACATTCTGCAGGTCGGCACGTGCTGGGCGATCACGGCTTGGGATCTGTCGACCTCAACTTCCTTCTCGGCT
CGGGCCTGCCCCACCTCTGCCTCAAGCTAA
Protein sequenceShow/hide protein sequence
MDPIKHFLTSGLTPADQSQARKLRRKVAHYIIQEGKLYKRGYSLPLLWCLDPEEARATIGQRLTATLRSSQRRVTSASASRTSCDNPQRWRGIYASAQYTGHVKI
ERKATEGRKERAIFRKHHLIRLAGSSVGIHCLGSLANVSRTVDLDGLIILLGGSDVLLRASGLELPDGIVEALVCKVTCKAIKFRELLHLLFQIGPTLHILLSFP
PAFLCSLGAPSNILQVGTCWAITAWDLSTSTSFSARACPTSASS