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Moc07g10540 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g10540
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPol protein
Genome locationchr7:8090335..8091865
RNA-Seq ExpressionMoc07g10540
SyntenyMoc07g10540
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR016197 - Chromo-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022153199.1 uncharacterized protein LOC111020755 [Momordica charantia]1.9e-2398.33Show/hide
Query:  KVPVKVLARETKLLRNRTIRLVKVLWRNHQLEEATWEREDDIKVRYPELFEQSTFGDESF
        +VPVKVLARETKLLRNRTIRLVKVLWRNHQLEEATWEREDDIKVRYPELFEQSTFGDESF
Subjt:  KVPVKVLARETKLLRNRTIRLVKVLWRNHQLEEATWEREDDIKVRYPELFEQSTFGDESF
XP_022157851.1 uncharacterized protein LOC111024467 [Momordica charantia]6.6e-2445.45Show/hide
Query:  ELERLEVELTVYDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGF-------------------------------------------------------
        EL+R EVEL V DV+ +LARLSVEP+LRQRII AQK DPSL + F                                                       
Subjt:  ELERLEVELTVYDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGF-------------------------------------------------------

Query:  -----KVPVKVLARETKLLRNRTIRLVKVLWRNHQLEEATWEREDDIKVRYPELFEQSTFGDESF
              VP+++LA+ETK+LRN +I LVKV WRNHQ+EE TWERED+IK RYPELF+Q TF DESF
Subjt:  -----KVPVKVLARETKLLRNRTIRLVKVLWRNHQLEEATWEREDDIKVRYPELFEQSTFGDESF
XP_022158757.1 uncharacterized protein LOC111025221 [Momordica charantia]5.8e-2085Show/hide
Query:  KVPVKVLARETKLLRNRTIRLVKVLWRNHQLEEATWEREDDIKVRYPELFEQSTFGDESF
        +VPVK+ ARETKLL+NRTI LVKVLWRNHQ+EEATWEREDD+K RYPEL EQSTFGDESF
Subjt:  KVPVKVLARETKLLRNRTIRLVKVLWRNHQLEEATWEREDDIKVRYPELFEQSTFGDESF
XP_022158869.1 uncharacterized protein LOC111025333 [Momordica charantia]1.2e-2088.33Show/hide
Query:  KVPVKVLARETKLLRNRTIRLVKVLWRNHQLEEATWEREDDIKVRYPELFEQSTFGDESF
        +VPVK+LA+ETKLLRN TIRLVKVLWRNHQ+EEATWEREDDIK RYPEL EQSTFGDESF
Subjt:  KVPVKVLARETKLLRNRTIRLVKVLWRNHQLEEATWEREDDIKVRYPELFEQSTFGDESF
XP_022159225.1 uncharacterized protein LOC111025643 [Momordica charantia]2.6e-2086.67Show/hide
Query:  KVPVKVLARETKLLRNRTIRLVKVLWRNHQLEEATWEREDDIKVRYPELFEQSTFGDESF
        +VPV +L +ETKLLRN+TIRLVKVLWRNHQ+EEATWEREDDIKVRYPEL EQSTFGDESF
Subjt:  KVPVKVLARETKLLRNRTIRLVKVLWRNHQLEEATWEREDDIKVRYPELFEQSTFGDESF
TrEMBL top hitse value%identityAlignment
A0A6J1DIC9 uncharacterized protein LOC1110207559.3e-2498.33Show/hide
Query:  KVPVKVLARETKLLRNRTIRLVKVLWRNHQLEEATWEREDDIKVRYPELFEQSTFGDESF
        +VPVKVLARETKLLRNRTIRLVKVLWRNHQLEEATWEREDDIKVRYPELFEQSTFGDESF
Subjt:  KVPVKVLARETKLLRNRTIRLVKVLWRNHQLEEATWEREDDIKVRYPELFEQSTFGDESF
A0A6J1DY18 uncharacterized protein LOC1110252212.8e-2085Show/hide
Query:  KVPVKVLARETKLLRNRTIRLVKVLWRNHQLEEATWEREDDIKVRYPELFEQSTFGDESF
        +VPVK+ ARETKLL+NRTI LVKVLWRNHQ+EEATWEREDD+K RYPEL EQSTFGDESF
Subjt:  KVPVKVLARETKLLRNRTIRLVKVLWRNHQLEEATWEREDDIKVRYPELFEQSTFGDESF
A0A6J1DY31 uncharacterized protein LOC1110256431.3e-2086.67Show/hide
Query:  KVPVKVLARETKLLRNRTIRLVKVLWRNHQLEEATWEREDDIKVRYPELFEQSTFGDESF
        +VPV +L +ETKLLRN+TIRLVKVLWRNHQ+EEATWEREDDIKVRYPEL EQSTFGDESF
Subjt:  KVPVKVLARETKLLRNRTIRLVKVLWRNHQLEEATWEREDDIKVRYPELFEQSTFGDESF
A0A6J1DZD5 uncharacterized protein LOC1110244673.2e-2445.45Show/hide
Query:  ELERLEVELTVYDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGF-------------------------------------------------------
        EL+R EVEL V DV+ +LARLSVEP+LRQRII AQK DPSL + F                                                       
Subjt:  ELERLEVELTVYDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGF-------------------------------------------------------

Query:  -----KVPVKVLARETKLLRNRTIRLVKVLWRNHQLEEATWEREDDIKVRYPELFEQSTFGDESF
              VP+++LA+ETK+LRN +I LVKV WRNHQ+EE TWERED+IK RYPELF+Q TF DESF
Subjt:  -----KVPVKVLARETKLLRNRTIRLVKVLWRNHQLEEATWEREDDIKVRYPELFEQSTFGDESF
A0A6J1E0P3 uncharacterized protein LOC1110253335.6e-2188.33Show/hide
Query:  KVPVKVLARETKLLRNRTIRLVKVLWRNHQLEEATWEREDDIKVRYPELFEQSTFGDESF
        +VPVK+LA+ETKLLRN TIRLVKVLWRNHQ+EEATWEREDDIK RYPEL EQSTFGDESF
Subjt:  KVPVKVLARETKLLRNRTIRLVKVLWRNHQLEEATWEREDDIKVRYPELFEQSTFGDESF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAGCGAGTTGGAACGCTTGGAGGTAGAGTTGACGGTGTATGATGTCTCCGCGCTGTTGGCTCGACTCTCGGTGGAACCCAGTCTGAGGCAGAGGATCATTGTCGC
CCAAAAGGAAGACCCTAGCTTGGCCAAAGGCTTTAAGGTACCCGTCAAAGTTTTGGCAAGAGAAACCAAGTTATTGAGGAACCGGACGATTCGCTTGGTTAAGGTTTTAT
GGAGAAACCACCAACTGGAAGAAGCTACTTGGGAGCGGGAGGACGATATCAAGGTGAGGTACCCTGAACTGTTCGAACAGTCAACTTTCGGGGACGAAAGTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCACAGCGAGTTGGAACGCTTGGAGGTAGAGTTGACGGTGTATGATGTCTCCGCGCTGTTGGCTCGACTCTCGGTGGAACCCAGTCTGAGGCAGAGGATCATTGTCGC
CCAAAAGGAAGACCCTAGCTTGGCCAAAGGCTTTAAGGTACCCGTCAAAGTTTTGGCAAGAGAAACCAAGTTATTGAGGAACCGGACGATTCGCTTGGTTAAGGTTTTAT
GGAGAAACCACCAACTGGAAGAAGCTACTTGGGAGCGGGAGGACGATATCAAGGTGAGGTACCCTGAACTGTTCGAACAGTCAACTTTCGGGGACGAAAGTTTTTGA
Protein sequenceShow/hide protein sequence
MHSELERLEVELTVYDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGFKVPVKVLARETKLLRNRTIRLVKVLWRNHQLEEATWEREDDIKVRYPELFEQSTFGDESF