; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc07g10560 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g10560
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr7:8093333..8102618
RNA-Seq ExpressionMoc07g10560
SyntenyMoc07g10560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]5.7e-0850.62Show/hide
Query:  HLMENDGADYNRWEDDLRKVLVDKKKNSAFRHKDVSPSCLLKNSNEKAQSCYSLIIPEEVITREKFDLMKIKFDAQVEALK
        H    +  +Y     DLR+ L ++K++S+ R K  SPSC  +NSN++A+S Y+ I PE VITRE+FD +K KFDAQVEALK
Subjt:  HLMENDGADYNRWEDDLRKVLVDKKKNSAFRHKDVSPSCLLKNSNEKAQSCYSLIIPEEVITREKFDLMKIKFDAQVEALK

XP_022154406.1 uncharacterized protein LOC111021683 [Momordica charantia]2.8e-0753.16Show/hide
Query:  NDGA-DYNRWEDDLRKVLVDKKKNSAFRHKD-VSPSCLLKNSNEKAQSCYSLIIPEEVITREKFDLMKIKFDAQVEALK
        NDG  DY+  ++D+RK L +KKK ++   +D +S S    NSN KAQS Y  + PE +ITRE+FDLMK KF  QVEALK
Subjt:  NDGA-DYNRWEDDLRKVLVDKKKNSAFRHKD-VSPSCLLKNSNEKAQSCYSLIIPEEVITREKFDLMKIKFDAQVEALK

XP_022155128.1 uncharacterized protein LOC111022267 [Momordica charantia]6.3e-0750Show/hide
Query:  ENDGADYNRWEDDLRKVLVDKKKNSAFRHKDVSPSCLLKNSNEKAQSCYSLIIPEEVITREKFDLMKIKFDAQVEALK
        E +  +Y     DLR+ L ++K++S+ R K  SPS   +NSN++A+S Y+ I P+ VITRE+FD +K KFDAQVEALK
Subjt:  ENDGADYNRWEDDLRKVLVDKKKNSAFRHKDVSPSCLLKNSNEKAQSCYSLIIPEEVITREKFDLMKIKFDAQVEALK

XP_022155139.1 uncharacterized protein LOC111022280 [Momordica charantia]1.8e-0955.13Show/hide
Query:  NDGADYNRWEDDLRKVLVDKKKNSAFRHKD-VSPSCLLKNSNEKAQSCYSLIIPEEVITREKFDLMKIKFDAQVEALK
        ++G DY+  ++DLRK L DKKK +++  +D +S S    NSN KAQS Y  +IPE VI RE+FDLMK +FD QVEALK
Subjt:  NDGADYNRWEDDLRKVLVDKKKNSAFRHKD-VSPSCLLKNSNEKAQSCYSLIIPEEVITREKFDLMKIKFDAQVEALK

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]3.3e-0844.74Show/hide
Query:  EDLATIQNELEDIRTLGFSSHLMEND-----GADYNRWED--------DLRKVLVDKKKNSAFRHKDVSPSCLLKNSNEKAQSCYSLIIPEEVITREKFD
        E+   +Q E+E +RT   +   M N+     GA  +R ED        DLR  L  +K++S+ R K  SPSC  KNSN++A+S Y+ ++PE VITRE+FD
Subjt:  EDLATIQNELEDIRTLGFSSHLMEND-----GADYNRWED--------DLRKVLVDKKKNSAFRHKDVSPSCLLKNSNEKAQSCYSLIIPEEVITREKFD

Query:  LMKIKFDAQVEALK
         +K KFDAQVE LK
Subjt:  LMKIKFDAQVEALK

TrEMBL top hitse value%identityAlignment
A0A6J1DDW5 uncharacterized protein LOC1110196342.8e-0850.62Show/hide
Query:  HLMENDGADYNRWEDDLRKVLVDKKKNSAFRHKDVSPSCLLKNSNEKAQSCYSLIIPEEVITREKFDLMKIKFDAQVEALK
        H    +  +Y     DLR+ L ++K++S+ R K  SPSC  +NSN++A+S Y+ I PE VITRE+FD +K KFDAQVEALK
Subjt:  HLMENDGADYNRWEDDLRKVLVDKKKNSAFRHKDVSPSCLLKNSNEKAQSCYSLIIPEEVITREKFDLMKIKFDAQVEALK

A0A6J1DM55 uncharacterized protein LOC1110222673.0e-0750Show/hide
Query:  ENDGADYNRWEDDLRKVLVDKKKNSAFRHKDVSPSCLLKNSNEKAQSCYSLIIPEEVITREKFDLMKIKFDAQVEALK
        E +  +Y     DLR+ L ++K++S+ R K  SPS   +NSN++A+S Y+ I P+ VITRE+FD +K KFDAQVEALK
Subjt:  ENDGADYNRWEDDLRKVLVDKKKNSAFRHKDVSPSCLLKNSNEKAQSCYSLIIPEEVITREKFDLMKIKFDAQVEALK

A0A6J1DNM4 Ribonuclease H1.4e-0753.16Show/hide
Query:  NDGA-DYNRWEDDLRKVLVDKKKNSAFRHKD-VSPSCLLKNSNEKAQSCYSLIIPEEVITREKFDLMKIKFDAQVEALK
        NDG  DY+  ++D+RK L +KKK ++   +D +S S    NSN KAQS Y  + PE +ITRE+FDLMK KF  QVEALK
Subjt:  NDGA-DYNRWEDDLRKVLVDKKKNSAFRHKD-VSPSCLLKNSNEKAQSCYSLIIPEEVITREKFDLMKIKFDAQVEALK

A0A6J1DPC9 uncharacterized protein LOC1110222808.6e-1055.13Show/hide
Query:  NDGADYNRWEDDLRKVLVDKKKNSAFRHKD-VSPSCLLKNSNEKAQSCYSLIIPEEVITREKFDLMKIKFDAQVEALK
        ++G DY+  ++DLRK L DKKK +++  +D +S S    NSN KAQS Y  +IPE VI RE+FDLMK +FD QVEALK
Subjt:  NDGADYNRWEDDLRKVLVDKKKNSAFRHKD-VSPSCLLKNSNEKAQSCYSLIIPEEVITREKFDLMKIKFDAQVEALK

A0A6J1DZJ1 uncharacterized protein LOC1110257381.6e-0844.74Show/hide
Query:  EDLATIQNELEDIRTLGFSSHLMEND-----GADYNRWED--------DLRKVLVDKKKNSAFRHKDVSPSCLLKNSNEKAQSCYSLIIPEEVITREKFD
        E+   +Q E+E +RT   +   M N+     GA  +R ED        DLR  L  +K++S+ R K  SPSC  KNSN++A+S Y+ ++PE VITRE+FD
Subjt:  EDLATIQNELEDIRTLGFSSHLMEND-----GADYNRWED--------DLRKVLVDKKKNSAFRHKDVSPSCLLKNSNEKAQSCYSLIIPEEVITREKFD

Query:  LMKIKFDAQVEALK
         +K KFDAQVE LK
Subjt:  LMKIKFDAQVEALK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAGTGTCAGGGCCTCGGGTATAAATGGTCGAGGGCTGATACGTCACTAATTGGGTATCGAGGCCTCAGGTATAAATGGTCGGGGGTCGATACGCCAATATTGGA
TAAAGATGAGCGTCGAGGCCTCGGGTATAAATGGTCGGGGGTCGATGCGAGGAGTCTTTCGAAAGGAGAACTATTGGGGCCTTGGGGGTCGGTGCAACAGTTCCAGACCT
TGGGTAGAAAGGTCAAGGATCGAACGCCAAGTGCCATAGAGAAGTCGGTCGACACAACAGTTCGAGGCCTTGGGTACAAAGGTCAAGGGTTGAACGTCAAGTGTCGTAGA
GAAGTGTTGATATCCTGGGTACAAAGGTATGTATTGCTTATTGGGTACCGTGGTTGTACTCACCCCTTATTTTTCTCACCAGATTTTGTAGCAGCGGCGGCGCGTTTCCC
CCGGCGTCAGCAACGAACCAGCGCAGCTCCTCTCCGCGGCGGCACACGGCGGCGACCTAGATCTGCGGCGGCGCACGGCGAACGGGTGTATAGCGGCAAACCGGAGGCGG
TCGGCTGCTACGATCTGACGGACAGCGACTCCAGCGGCGGGATTTGTACGTTACAGGAGTGTTTAGGACGTTTGGCGGCGACCCACATCGGTTCGAAGCTCGATTTAGGC
TACCCACACCTTGGCAAGCTAGATATAGGTGTGGAGTCGACGCAACATTTAAGGGCGCGGTTGTGTGTAAGTAGCACGGGGGCGGGTGCGTGCGTTGATGTTTGTTATTT
GGTTGCCGATGTGCTCTTTATGTTGCTTAATATTGGTTCTGATACGTGGTTGTGTAGTGTAACTCTTGTTTATGTTGTTTTGTATCCCTGGGAAGTAGTACTGAAATCTC
GGTTGGAGGCTAGAAATGTTACGTGGAATTATGAAAGTTATGAAGTGAATGGGACTAGGTTGAAAATTATTTATGTTCCGTTGGATGACTGTTTGACTTCGATAATTTTC
TTGTATGGCGACGAGGAATTGTTGGGTCGACCCATCACGCATGTCTGCCCGCAACGCAAATCCGTCCCTTCTCAAGTAGTAGATCCAGAGGATCTTGCCACCATACAGAA
CGAGCTCGAAGACATTCGTACTCTAGGATTTTCCTCTCACCTTATGGAGAATGACGGGGCCGATTACAATCGCTGGGAGGACGACCTGAGGAAAGTTCTTGTCGACAAGA
AAAAGAACTCTGCCTTTCGACACAAGGACGTCTCTCCTTCTTGCTTACTGAAAAACTCAAACGAAAAGGCTCAATCTTGTTACAGTCTGATTATACCTGAAGAAGTAATC
ACGAGGGAAAAGTTTGACTTGATGAAAATTAAGTTTGACGCCCAGGTCGAAGCTCTCAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAGTGTCAGGGCCTCGGGTATAAATGGTCGAGGGCTGATACGTCACTAATTGGGTATCGAGGCCTCAGGTATAAATGGTCGGGGGTCGATACGCCAATATTGGA
TAAAGATGAGCGTCGAGGCCTCGGGTATAAATGGTCGGGGGTCGATGCGAGGAGTCTTTCGAAAGGAGAACTATTGGGGCCTTGGGGGTCGGTGCAACAGTTCCAGACCT
TGGGTAGAAAGGTCAAGGATCGAACGCCAAGTGCCATAGAGAAGTCGGTCGACACAACAGTTCGAGGCCTTGGGTACAAAGGTCAAGGGTTGAACGTCAAGTGTCGTAGA
GAAGTGTTGATATCCTGGGTACAAAGGTATGTATTGCTTATTGGGTACCGTGGTTGTACTCACCCCTTATTTTTCTCACCAGATTTTGTAGCAGCGGCGGCGCGTTTCCC
CCGGCGTCAGCAACGAACCAGCGCAGCTCCTCTCCGCGGCGGCACACGGCGGCGACCTAGATCTGCGGCGGCGCACGGCGAACGGGTGTATAGCGGCAAACCGGAGGCGG
TCGGCTGCTACGATCTGACGGACAGCGACTCCAGCGGCGGGATTTGTACGTTACAGGAGTGTTTAGGACGTTTGGCGGCGACCCACATCGGTTCGAAGCTCGATTTAGGC
TACCCACACCTTGGCAAGCTAGATATAGGTGTGGAGTCGACGCAACATTTAAGGGCGCGGTTGTGTGTAAGTAGCACGGGGGCGGGTGCGTGCGTTGATGTTTGTTATTT
GGTTGCCGATGTGCTCTTTATGTTGCTTAATATTGGTTCTGATACGTGGTTGTGTAGTGTAACTCTTGTTTATGTTGTTTTGTATCCCTGGGAAGTAGTACTGAAATCTC
GGTTGGAGGCTAGAAATGTTACGTGGAATTATGAAAGTTATGAAGTGAATGGGACTAGGTTGAAAATTATTTATGTTCCGTTGGATGACTGTTTGACTTCGATAATTTTC
TTGTATGGCGACGAGGAATTGTTGGGTCGACCCATCACGCATGTCTGCCCGCAACGCAAATCCGTCCCTTCTCAAGTAGTAGATCCAGAGGATCTTGCCACCATACAGAA
CGAGCTCGAAGACATTCGTACTCTAGGATTTTCCTCTCACCTTATGGAGAATGACGGGGCCGATTACAATCGCTGGGAGGACGACCTGAGGAAAGTTCTTGTCGACAAGA
AAAAGAACTCTGCCTTTCGACACAAGGACGTCTCTCCTTCTTGCTTACTGAAAAACTCAAACGAAAAGGCTCAATCTTGTTACAGTCTGATTATACCTGAAGAAGTAATC
ACGAGGGAAAAGTTTGACTTGATGAAAATTAAGTTTGACGCCCAGGTCGAAGCTCTCAAGTAG
Protein sequenceShow/hide protein sequence
MGECQGLGYKWSRADTSLIGYRGLRYKWSGVDTPILDKDERRGLGYKWSGVDARSLSKGELLGPWGSVQQFQTLGRKVKDRTPSAIEKSVDTTVRGLGYKGQGLNVKCRR
EVLISWVQRYVLLIGYRGCTHPLFFSPDFVAAAARFPRRQQRTSAAPLRGGTRRRPRSAAAHGERVYSGKPEAVGCYDLTDSDSSGGICTLQECLGRLAATHIGSKLDLG
YPHLGKLDIGVESTQHLRARLCVSSTGAGACVDVCYLVADVLFMLLNIGSDTWLCSVTLVYVVLYPWEVVLKSRLEARNVTWNYESYEVNGTRLKIIYVPLDDCLTSIIF
LYGDEELLGRPITHVCPQRKSVPSQVVDPEDLATIQNELEDIRTLGFSSHLMENDGADYNRWEDDLRKVLVDKKKNSAFRHKDVSPSCLLKNSNEKAQSCYSLIIPEEVI
TREKFDLMKIKFDAQVEALK