; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc07g10690 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g10690
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr7:8165283..8166538
RNA-Seq ExpressionMoc07g10690
SyntenyMoc07g10690
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]1.4e-7270.48Show/hide
Query:  KQHKSPAPNGGKSNQDNRNSEPTSLDKGKPTDRPESSEKRHNQKEKEFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFDGTTDPVDHLDAYREWMD
        +QHKSPAPNGGKS+ ++R+SEP SLDKGKP DRPESSEKRHNQK+K FDLEELLDQADSPFTEEIMREK                               
Subjt:  KQHKSPAPNGGKSNQDNRNSEPTSLDKGKPTDRPESSEKRHNQKEKEFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFDGTTDPVDHLDAYREWMD

Query:  IYGVSEAVRCQRAAESLHDYVARFNEEKLQVEGLTDAVSLLAFMSSVRDEHLSFSFGKKTPSTFSEALSRAQRYMSAGEFFYLKRGPDEKRTDQKRERSG
                   R  ESLHDYV RFN+EKLQVEGLTDAVSLLAF+  VRDEHLSFSFGK+TPSTFSEALSRAQRYMSAGEFFY KR  + KRTDQKRERSG
Subjt:  IYGVSEAVRCQRAAESLHDYVARFNEEKLQVEGLTDAVSLLAFMSSVRDEHLSFSFGKKTPSTFSEALSRAQRYMSAGEFFYLKRGPDEKRTDQKRERSG

Query:  DKPQGSRWEKRDRSSQKDPPRKFEKYT
        DKPQGSRWEKRDRS QKDPP+KFEKYT
Subjt:  DKPQGSRWEKRDRSSQKDPPRKFEKYT

XP_022145129.1 uncharacterized protein LOC111014646 [Momordica charantia]1.5e-8581.65Show/hide
Query:  MTTERSPRRSDDNCSAKRRMNLDNPQVGGPEDGTSQSNPEHQEGLPEPHALTTPEPLQKQFAVLEDK-------------------SDEVPLVRDPRKGK
        MT ERSPRRSDDNCSAKRR+NLD+PQVGGPEDGTSQ N E QEGLPE HALTTPEPLQKQFAVLEDK                   SDEVPLVRDPRKGK
Subjt:  MTTERSPRRSDDNCSAKRRMNLDNPQVGGPEDGTSQSNPEHQEGLPEPHALTTPEPLQKQFAVLEDK-------------------SDEVPLVRDPRKGK

Query:  GPAESETEESTNSAGSKLRIGGKTRRRTRIFDSQKIKKQHKSPAPNGGKSNQDNRNSEPTSLDKGKPTDRPESSEKRHNQKEKEFDLEELLDQADSPFTE
        GPA+SETEESTNSAGSKLRIGG TRRRT+IFDSQK+KKQHK  APNGG+S+ D+RNSEP SLDKGKP D+PESSEKRHNQKEK FDLEELLDQADSPFTE
Subjt:  GPAESETEESTNSAGSKLRIGGKTRRRTRIFDSQKIKKQHKSPAPNGGKSNQDNRNSEPTSLDKGKPTDRPESSEKRHNQKEKEFDLEELLDQADSPFTE

Query:  EIMREKVPPKFKLPTVKQ
        EIMREKVPPKFKLPTVKQ
Subjt:  EIMREKVPPKFKLPTVKQ

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]8.2e-6062.04Show/hide
Query:  EEIMREKVPPKFKLPTVKQFDGTTDPVDHLDAYREWMDIYGVSEAVRC----------------------------------------------------
        EEIM+ KVPPKFKLPTVKQFDGT D VDHLDAYREWMDIYGVSEAV+C                                                    
Subjt:  EEIMREKVPPKFKLPTVKQFDGTTDPVDHLDAYREWMDIYGVSEAVRC----------------------------------------------------

Query:  --QRAAESLHDYVARFNEEKLQVEGLTDAVSLLAFMSSVRDEHLSFSFGKKTPSTFSEALSRAQRYMSAGEFFYLKRGPDEKRTDQKRERSGDKPQGSRW
          QRA ESLHDYVARFNEEKLQVEGLT+AVSL+AFMS +RDEHLSFSFGKKTPSTFSEALSRAQ+YMSAGEFF+ KR P+ K++DQ RERSGDKPQ SRW
Subjt:  --QRAAESLHDYVARFNEEKLQVEGLTDAVSLLAFMSSVRDEHLSFSFGKKTPSTFSEALSRAQRYMSAGEFFYLKRGPDEKRTDQKRERSGDKPQGSRW

Query:  EKRDRSSQKDPPRKFE
        EKRDRS++K  P   +
Subjt:  EKRDRSSQKDPPRKFE

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.0e-15476.25Show/hide
Query:  MTTERSPRRSDDNCSAKRRMNLDNPQVGGPEDGTSQSNPEHQEGLPEPHALTTPEPLQKQFAVLEDK-SDEVPLVRDPRKGKGPAESETEESTNSAGSKL
        MT ERSPRRSDD+CSAKRR+NL +PQVGGPEDGTSQ N E QEGL E  ALTTPEP QKQFAVLEDK SDEVPLVRDP+KGKGP ES+TEESTNS GSKL
Subjt:  MTTERSPRRSDDNCSAKRRMNLDNPQVGGPEDGTSQSNPEHQEGLPEPHALTTPEPLQKQFAVLEDK-SDEVPLVRDPRKGKGPAESETEESTNSAGSKL

Query:  RIGGKTRRRTRIFDSQKIKKQHKSPAPNGGKSNQDNRNSEPTSLDKGKPTDRPESSEKRHNQKEKEFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQ
        RIGG TR+RTRIFD +K KKQHKSPAPNGGKS+ D+RNSEP SLDKGKP DRPESSEKRH+ KEK FDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQ
Subjt:  RIGGKTRRRTRIFDSQKIKKQHKSPAPNGGKSNQDNRNSEPTSLDKGKPTDRPESSEKRHNQKEKEFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQ

Query:  FDGTTDPVDHLDAYREWMDIYGVSEAVRC------------------------------------------------------QRAAESLHDYVARFNEE
        FD TTDPVDHLDAYREWMDIYGVSEAVRC                                                      QR  ESL DYVARFNEE
Subjt:  FDGTTDPVDHLDAYREWMDIYGVSEAVRC------------------------------------------------------QRAAESLHDYVARFNEE

Query:  KLQVEGLTDAVSLLAFMSSVRDEHLSFSFGKKTPSTFSEALSRAQRYMSAGEFFYLKRGPDEKRTDQKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYT
        KLQVEGLTDAVSLLAFMS VRDEHLSFSFGK+TP+TFSEALSRAQRYMSAGEFFY KR PD KRTD KRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYT
Subjt:  KLQVEGLTDAVSLLAFMSSVRDEHLSFSFGKKTPSTFSEALSRAQRYMSAGEFFYLKRGPDEKRTDQKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYT

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]2.5e-10172.41Show/hide
Query:  RRRTRIFDSQKIKKQHKSPAPNGGKSNQDNRNSEPTSLDKGKPTDRPESSEKRHNQKEKEFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFDGTTD
        RRRTRIFDSQKIKKQHKS APNG K++ DNRNSEP SL+KGKP DRPESSEKRHNQKEK FDLEELL QADSPFTEEIMREKVPPKFKLPTVK FDG T+
Subjt:  RRRTRIFDSQKIKKQHKSPAPNGGKSNQDNRNSEPTSLDKGKPTDRPESSEKRHNQKEKEFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFDGTTD

Query:  PVDHLDAYREWMDIYGVSEAVRC------------------------------------------------------QRAAESLHDYVARFNEEKLQVEG
        PVDHLDAYREWMDIYGVS+A+RC                                                      QR AESLHDYVARFNEEKLQ+EG
Subjt:  PVDHLDAYREWMDIYGVSEAVRC------------------------------------------------------QRAAESLHDYVARFNEEKLQVEG

Query:  LTDAVSLLAFMSSVRDEHLSFSFGKKTPSTFSEALSRAQRYMSAGEFFYLKRGPDEKRTDQKRERSGDKPQGSRWEKRDRSSQKDPPRKF
        LTDAVSLLAFMS VRDEHLSFSF K+TPSTFSEALSRAQRYMSA EF Y KR PD KRTDQKRERSGDKPQGSRWEKRDR SQKDPPRKF
Subjt:  LTDAVSLLAFMSSVRDEHLSFSFGKKTPSTFSEALSRAQRYMSAGEFFYLKRGPDEKRTDQKRERSGDKPQGSRWEKRDRSSQKDPPRKF

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128057.0e-7370.48Show/hide
Query:  KQHKSPAPNGGKSNQDNRNSEPTSLDKGKPTDRPESSEKRHNQKEKEFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFDGTTDPVDHLDAYREWMD
        +QHKSPAPNGGKS+ ++R+SEP SLDKGKP DRPESSEKRHNQK+K FDLEELLDQADSPFTEEIMREK                               
Subjt:  KQHKSPAPNGGKSNQDNRNSEPTSLDKGKPTDRPESSEKRHNQKEKEFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFDGTTDPVDHLDAYREWMD

Query:  IYGVSEAVRCQRAAESLHDYVARFNEEKLQVEGLTDAVSLLAFMSSVRDEHLSFSFGKKTPSTFSEALSRAQRYMSAGEFFYLKRGPDEKRTDQKRERSG
                   R  ESLHDYV RFN+EKLQVEGLTDAVSLLAF+  VRDEHLSFSFGK+TPSTFSEALSRAQRYMSAGEFFY KR  + KRTDQKRERSG
Subjt:  IYGVSEAVRCQRAAESLHDYVARFNEEKLQVEGLTDAVSLLAFMSSVRDEHLSFSFGKKTPSTFSEALSRAQRYMSAGEFFYLKRGPDEKRTDQKRERSG

Query:  DKPQGSRWEKRDRSSQKDPPRKFEKYT
        DKPQGSRWEKRDRS QKDPP+KFEKYT
Subjt:  DKPQGSRWEKRDRSSQKDPPRKFEKYT

A0A6J1CUA7 uncharacterized protein LOC1110146467.2e-8681.65Show/hide
Query:  MTTERSPRRSDDNCSAKRRMNLDNPQVGGPEDGTSQSNPEHQEGLPEPHALTTPEPLQKQFAVLEDK-------------------SDEVPLVRDPRKGK
        MT ERSPRRSDDNCSAKRR+NLD+PQVGGPEDGTSQ N E QEGLPE HALTTPEPLQKQFAVLEDK                   SDEVPLVRDPRKGK
Subjt:  MTTERSPRRSDDNCSAKRRMNLDNPQVGGPEDGTSQSNPEHQEGLPEPHALTTPEPLQKQFAVLEDK-------------------SDEVPLVRDPRKGK

Query:  GPAESETEESTNSAGSKLRIGGKTRRRTRIFDSQKIKKQHKSPAPNGGKSNQDNRNSEPTSLDKGKPTDRPESSEKRHNQKEKEFDLEELLDQADSPFTE
        GPA+SETEESTNSAGSKLRIGG TRRRT+IFDSQK+KKQHK  APNGG+S+ D+RNSEP SLDKGKP D+PESSEKRHNQKEK FDLEELLDQADSPFTE
Subjt:  GPAESETEESTNSAGSKLRIGGKTRRRTRIFDSQKIKKQHKSPAPNGGKSNQDNRNSEPTSLDKGKPTDRPESSEKRHNQKEKEFDLEELLDQADSPFTE

Query:  EIMREKVPPKFKLPTVKQ
        EIMREKVPPKFKLPTVKQ
Subjt:  EIMREKVPPKFKLPTVKQ

A0A6J1D7D2 uncharacterized protein LOC1110183074.0e-6062.04Show/hide
Query:  EEIMREKVPPKFKLPTVKQFDGTTDPVDHLDAYREWMDIYGVSEAVRC----------------------------------------------------
        EEIM+ KVPPKFKLPTVKQFDGT D VDHLDAYREWMDIYGVSEAV+C                                                    
Subjt:  EEIMREKVPPKFKLPTVKQFDGTTDPVDHLDAYREWMDIYGVSEAVRC----------------------------------------------------

Query:  --QRAAESLHDYVARFNEEKLQVEGLTDAVSLLAFMSSVRDEHLSFSFGKKTPSTFSEALSRAQRYMSAGEFFYLKRGPDEKRTDQKRERSGDKPQGSRW
          QRA ESLHDYVARFNEEKLQVEGLT+AVSL+AFMS +RDEHLSFSFGKKTPSTFSEALSRAQ+YMSAGEFF+ KR P+ K++DQ RERSGDKPQ SRW
Subjt:  --QRAAESLHDYVARFNEEKLQVEGLTDAVSLLAFMSSVRDEHLSFSFGKKTPSTFSEALSRAQRYMSAGEFFYLKRGPDEKRTDQKRERSGDKPQGSRW

Query:  EKRDRSSQKDPPRKFE
        EKRDRS++K  P   +
Subjt:  EKRDRSSQKDPPRKFE

A0A6J1DWY0 uncharacterized protein LOC1110252939.5e-15576.25Show/hide
Query:  MTTERSPRRSDDNCSAKRRMNLDNPQVGGPEDGTSQSNPEHQEGLPEPHALTTPEPLQKQFAVLEDK-SDEVPLVRDPRKGKGPAESETEESTNSAGSKL
        MT ERSPRRSDD+CSAKRR+NL +PQVGGPEDGTSQ N E QEGL E  ALTTPEP QKQFAVLEDK SDEVPLVRDP+KGKGP ES+TEESTNS GSKL
Subjt:  MTTERSPRRSDDNCSAKRRMNLDNPQVGGPEDGTSQSNPEHQEGLPEPHALTTPEPLQKQFAVLEDK-SDEVPLVRDPRKGKGPAESETEESTNSAGSKL

Query:  RIGGKTRRRTRIFDSQKIKKQHKSPAPNGGKSNQDNRNSEPTSLDKGKPTDRPESSEKRHNQKEKEFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQ
        RIGG TR+RTRIFD +K KKQHKSPAPNGGKS+ D+RNSEP SLDKGKP DRPESSEKRH+ KEK FDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQ
Subjt:  RIGGKTRRRTRIFDSQKIKKQHKSPAPNGGKSNQDNRNSEPTSLDKGKPTDRPESSEKRHNQKEKEFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQ

Query:  FDGTTDPVDHLDAYREWMDIYGVSEAVRC------------------------------------------------------QRAAESLHDYVARFNEE
        FD TTDPVDHLDAYREWMDIYGVSEAVRC                                                      QR  ESL DYVARFNEE
Subjt:  FDGTTDPVDHLDAYREWMDIYGVSEAVRC------------------------------------------------------QRAAESLHDYVARFNEE

Query:  KLQVEGLTDAVSLLAFMSSVRDEHLSFSFGKKTPSTFSEALSRAQRYMSAGEFFYLKRGPDEKRTDQKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYT
        KLQVEGLTDAVSLLAFMS VRDEHLSFSFGK+TP+TFSEALSRAQRYMSAGEFFY KR PD KRTD KRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYT
Subjt:  KLQVEGLTDAVSLLAFMSSVRDEHLSFSFGKKTPSTFSEALSRAQRYMSAGEFFYLKRGPDEKRTDQKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYT

A0A6J1E1E7 uncharacterized protein LOC1110255481.2e-10172.41Show/hide
Query:  RRRTRIFDSQKIKKQHKSPAPNGGKSNQDNRNSEPTSLDKGKPTDRPESSEKRHNQKEKEFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFDGTTD
        RRRTRIFDSQKIKKQHKS APNG K++ DNRNSEP SL+KGKP DRPESSEKRHNQKEK FDLEELL QADSPFTEEIMREKVPPKFKLPTVK FDG T+
Subjt:  RRRTRIFDSQKIKKQHKSPAPNGGKSNQDNRNSEPTSLDKGKPTDRPESSEKRHNQKEKEFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFDGTTD

Query:  PVDHLDAYREWMDIYGVSEAVRC------------------------------------------------------QRAAESLHDYVARFNEEKLQVEG
        PVDHLDAYREWMDIYGVS+A+RC                                                      QR AESLHDYVARFNEEKLQ+EG
Subjt:  PVDHLDAYREWMDIYGVSEAVRC------------------------------------------------------QRAAESLHDYVARFNEEKLQVEG

Query:  LTDAVSLLAFMSSVRDEHLSFSFGKKTPSTFSEALSRAQRYMSAGEFFYLKRGPDEKRTDQKRERSGDKPQGSRWEKRDRSSQKDPPRKF
        LTDAVSLLAFMS VRDEHLSFSF K+TPSTFSEALSRAQRYMSA EF Y KR PD KRTDQKRERSGDKPQGSRWEKRDR SQKDPPRKF
Subjt:  LTDAVSLLAFMSSVRDEHLSFSFGKKTPSTFSEALSRAQRYMSAGEFFYLKRGPDEKRTDQKRERSGDKPQGSRWEKRDRSSQKDPPRKF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACAGAAAGGAGTCCACGACGCTCTGATGATAACTGCTCTGCCAAGAGGAGGATGAACTTGGACAACCCCCAGGTTGGAGGACCCGAGGATGGGACCAGCCAGTC
AAACCCGGAACATCAGGAGGGGTTGCCCGAGCCGCATGCACTAACGACCCCTGAGCCACTCCAAAAGCAGTTCGCAGTCTTGGAAGACAAGTCCGACGAGGTACCCCTTG
TCAGAGACCCGAGAAAGGGGAAGGGCCCAGCGGAAAGCGAGACCGAGGAATCAACAAACAGTGCAGGGAGCAAGTTGCGGATAGGTGGAAAGACCAGGCGACGAACCCGA
ATTTTCGACTCCCAAAAGATAAAAAAGCAACATAAATCCCCGGCACCAAACGGGGGCAAGAGCAACCAGGATAACAGAAACTCTGAGCCGACAAGTCTCGACAAAGGCAA
ACCGACAGATCGGCCAGAGTCTTCAGAGAAGCGACATAACCAAAAGGAGAAGGAATTCGACCTTGAAGAACTACTGGATCAAGCCGACTCACCATTCACGGAGGAGATCA
TGAGAGAGAAGGTCCCTCCAAAATTCAAGCTACCCACGGTGAAACAATTCGACGGGACGACCGACCCAGTGGACCATCTAGATGCTTATCGGGAATGGATGGATATCTAC
GGAGTGTCGGAGGCGGTCAGGTGCCAGAGGGCGGCAGAGAGTCTACACGACTATGTAGCTCGGTTCAACGAGGAGAAGTTGCAGGTAGAAGGCCTTACAGACGCTGTATC
TCTGCTGGCCTTCATGTCCAGTGTCAGGGATGAGCATTTGTCATTTTCGTTCGGAAAGAAAACACCGAGTACCTTCTCGGAGGCGCTGAGCCGAGCTCAGAGGTACATGA
GCGCTGGTGAGTTCTTTTACTTAAAAAGGGGGCCAGACGAAAAGCGAACCGACCAAAAGAGGGAAAGGTCGGGAGATAAACCGCAGGGGTCGAGATGGGAGAAGAGGGAT
CGGAGTAGCCAGAAAGATCCACCCCGAAAATTTGAAAAGTATACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAACAGAAAGGAGTCCACGACGCTCTGATGATAACTGCTCTGCCAAGAGGAGGATGAACTTGGACAACCCCCAGGTTGGAGGACCCGAGGATGGGACCAGCCAGTC
AAACCCGGAACATCAGGAGGGGTTGCCCGAGCCGCATGCACTAACGACCCCTGAGCCACTCCAAAAGCAGTTCGCAGTCTTGGAAGACAAGTCCGACGAGGTACCCCTTG
TCAGAGACCCGAGAAAGGGGAAGGGCCCAGCGGAAAGCGAGACCGAGGAATCAACAAACAGTGCAGGGAGCAAGTTGCGGATAGGTGGAAAGACCAGGCGACGAACCCGA
ATTTTCGACTCCCAAAAGATAAAAAAGCAACATAAATCCCCGGCACCAAACGGGGGCAAGAGCAACCAGGATAACAGAAACTCTGAGCCGACAAGTCTCGACAAAGGCAA
ACCGACAGATCGGCCAGAGTCTTCAGAGAAGCGACATAACCAAAAGGAGAAGGAATTCGACCTTGAAGAACTACTGGATCAAGCCGACTCACCATTCACGGAGGAGATCA
TGAGAGAGAAGGTCCCTCCAAAATTCAAGCTACCCACGGTGAAACAATTCGACGGGACGACCGACCCAGTGGACCATCTAGATGCTTATCGGGAATGGATGGATATCTAC
GGAGTGTCGGAGGCGGTCAGGTGCCAGAGGGCGGCAGAGAGTCTACACGACTATGTAGCTCGGTTCAACGAGGAGAAGTTGCAGGTAGAAGGCCTTACAGACGCTGTATC
TCTGCTGGCCTTCATGTCCAGTGTCAGGGATGAGCATTTGTCATTTTCGTTCGGAAAGAAAACACCGAGTACCTTCTCGGAGGCGCTGAGCCGAGCTCAGAGGTACATGA
GCGCTGGTGAGTTCTTTTACTTAAAAAGGGGGCCAGACGAAAAGCGAACCGACCAAAAGAGGGAAAGGTCGGGAGATAAACCGCAGGGGTCGAGATGGGAGAAGAGGGAT
CGGAGTAGCCAGAAAGATCCACCCCGAAAATTTGAAAAGTATACCTGA
Protein sequenceShow/hide protein sequence
MTTERSPRRSDDNCSAKRRMNLDNPQVGGPEDGTSQSNPEHQEGLPEPHALTTPEPLQKQFAVLEDKSDEVPLVRDPRKGKGPAESETEESTNSAGSKLRIGGKTRRRTR
IFDSQKIKKQHKSPAPNGGKSNQDNRNSEPTSLDKGKPTDRPESSEKRHNQKEKEFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFDGTTDPVDHLDAYREWMDIY
GVSEAVRCQRAAESLHDYVARFNEEKLQVEGLTDAVSLLAFMSSVRDEHLSFSFGKKTPSTFSEALSRAQRYMSAGEFFYLKRGPDEKRTDQKRERSGDKPQGSRWEKRD
RSSQKDPPRKFEKYT