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Moc07g11110 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g11110
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr7:8536703..8542056
RNA-Seq ExpressionMoc07g11110
SyntenyMoc07g11110
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149417.1 protein NYNRIN-like [Momordica charantia]1.5e-3091.25Show/hide
Query:  ERTLARSVPVEILDSPSILEPDVMEVYTPSPSWMDPIVEFIKGNPLQDPNEQRKMARRAARFTLREGALYRRGFSLPLLK
        E  LARSVPVEILDSPSILEPDVMEV TPSPSW+DPIVEFIKGNP QDP EQ+KMARRAARFTLREGALYRRGFSLPLLK
Subjt:  ERTLARSVPVEILDSPSILEPDVMEVYTPSPSWMDPIVEFIKGNPLQDPNEQRKMARRAARFTLREGALYRRGFSLPLLK

XP_022150100.1 uncharacterized protein LOC111018362 [Momordica charantia]7.8e-3293.75Show/hide
Query:  ERTLARSVPVEILDSPSILEPDVMEVYTPSPSWMDPIVEFIKGNPLQDPNEQRKMARRAARFTLREGALYRRGFSLPLLK
        E  LARSVPVEILDSPSILEPDVMEV TPSPSWMDPIVEFIKGNPLQDP EQ+KMARRAARFTLREGALYRRGFSLPLLK
Subjt:  ERTLARSVPVEILDSPSILEPDVMEVYTPSPSWMDPIVEFIKGNPLQDPNEQRKMARRAARFTLREGALYRRGFSLPLLK

XP_022154406.1 uncharacterized protein LOC111021683 [Momordica charantia]8.1e-2987.5Show/hide
Query:  ERTLARSVPVEILDSPSILEPDVMEVYTPSPSWMDPIVEFIKGNPLQDPNEQRKMARRAARFTLREGALYRRGFSLPLLK
        E  LARSVPVEILD+PSILEPDVMEV TPSP+WMDPIVEFIKGNP QDP EQ+KMARRA RFTLREG LYRRGFSLPLLK
Subjt:  ERTLARSVPVEILDSPSILEPDVMEVYTPSPSWMDPIVEFIKGNPLQDPNEQRKMARRAARFTLREGALYRRGFSLPLLK

XP_022155869.1 uncharacterized protein LOC111022882 [Momordica charantia]9.6e-3088.75Show/hide
Query:  ERTLARSVPVEILDSPSILEPDVMEVYTPSPSWMDPIVEFIKGNPLQDPNEQRKMARRAARFTLREGALYRRGFSLPLLK
        E  LARSVPVEILD+PSILEPDVMEV TPSP+WMDPIVEFIKGNP QDP EQ+KMARRAARFTLREG LYRRGFSLPLLK
Subjt:  ERTLARSVPVEILDSPSILEPDVMEVYTPSPSWMDPIVEFIKGNPLQDPNEQRKMARRAARFTLREGALYRRGFSLPLLK

XP_022155870.1 uncharacterized protein LOC111022883 [Momordica charantia]2.5e-3088.1Show/hide
Query:  LARQERTLARSVPVEILDSPSILEPDVMEVYTPSPSWMDPIVEFIKGNPLQDPNEQRKMARRAARFTLREGALYRRGFSLPLLK
        LA  E  LARSVPVEILDSPSILEPD+M+V T SPSWMDPIVEFIKGNP QDP EQRKMARRAARFTLREGALYRRGFSLPLLK
Subjt:  LARQERTLARSVPVEILDSPSILEPDVMEVYTPSPSWMDPIVEFIKGNPLQDPNEQRKMARRAARFTLREGALYRRGFSLPLLK

TrEMBL top hitse value%identityAlignment
A0A6J1D7J6 Ribonuclease H3.8e-3293.75Show/hide
Query:  ERTLARSVPVEILDSPSILEPDVMEVYTPSPSWMDPIVEFIKGNPLQDPNEQRKMARRAARFTLREGALYRRGFSLPLLK
        E  LARSVPVEILDSPSILEPDVMEV TPSPSWMDPIVEFIKGNPLQDP EQ+KMARRAARFTLREGALYRRGFSLPLLK
Subjt:  ERTLARSVPVEILDSPSILEPDVMEVYTPSPSWMDPIVEFIKGNPLQDPNEQRKMARRAARFTLREGALYRRGFSLPLLK

A0A6J1D7W6 Ribonuclease H7.2e-3191.25Show/hide
Query:  ERTLARSVPVEILDSPSILEPDVMEVYTPSPSWMDPIVEFIKGNPLQDPNEQRKMARRAARFTLREGALYRRGFSLPLLK
        E  LARSVPVEILDSPSILEPDVMEV TPSPSW+DPIVEFIKGNP QDP EQ+KMARRAARFTLREGALYRRGFSLPLLK
Subjt:  ERTLARSVPVEILDSPSILEPDVMEVYTPSPSWMDPIVEFIKGNPLQDPNEQRKMARRAARFTLREGALYRRGFSLPLLK

A0A6J1DNL8 uncharacterized protein LOC1110228831.2e-3088.1Show/hide
Query:  LARQERTLARSVPVEILDSPSILEPDVMEVYTPSPSWMDPIVEFIKGNPLQDPNEQRKMARRAARFTLREGALYRRGFSLPLLK
        LA  E  LARSVPVEILDSPSILEPD+M+V T SPSWMDPIVEFIKGNP QDP EQRKMARRAARFTLREGALYRRGFSLPLLK
Subjt:  LARQERTLARSVPVEILDSPSILEPDVMEVYTPSPSWMDPIVEFIKGNPLQDPNEQRKMARRAARFTLREGALYRRGFSLPLLK

A0A6J1DNM4 Ribonuclease H3.9e-2987.5Show/hide
Query:  ERTLARSVPVEILDSPSILEPDVMEVYTPSPSWMDPIVEFIKGNPLQDPNEQRKMARRAARFTLREGALYRRGFSLPLLK
        E  LARSVPVEILD+PSILEPDVMEV TPSP+WMDPIVEFIKGNP QDP EQ+KMARRA RFTLREG LYRRGFSLPLLK
Subjt:  ERTLARSVPVEILDSPSILEPDVMEVYTPSPSWMDPIVEFIKGNPLQDPNEQRKMARRAARFTLREGALYRRGFSLPLLK

A0A6J1DRI7 uncharacterized protein LOC1110228824.6e-3088.75Show/hide
Query:  ERTLARSVPVEILDSPSILEPDVMEVYTPSPSWMDPIVEFIKGNPLQDPNEQRKMARRAARFTLREGALYRRGFSLPLLK
        E  LARSVPVEILD+PSILEPDVMEV TPSP+WMDPIVEFIKGNP QDP EQ+KMARRAARFTLREG LYRRGFSLPLLK
Subjt:  ERTLARSVPVEILDSPSILEPDVMEVYTPSPSWMDPIVEFIKGNPLQDPNEQRKMARRAARFTLREGALYRRGFSLPLLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTAAATGACCAACAGGTGACATTTTCTGTTTTTAATGCTATTAAGTTTCCTGCTGACGTGGAAGAATATTATTTGTTGAGAATAGCAGATGACTTGCTGACAGA
GGAGATACAACTTGAGAAGCTGTTAGATCAGTTGGAAGAGGAGTTGCACATCATCTTCGAAGAAGAAGAGAAAGAAGCAATGTTGCTCAAGCTCAATGAAGGAGGAACAC
CCGCAGATATAGTGTTCAGCAGGACATTTGAAGCACTGTACTTAAAAGACAGAGAACAAGCACTGCTACAACCTTCGGTGGAAAAAGCCCCTGAGCTGGAAATGAAAGTT
CTGCCTTCACACCTGAATCGTACCATGAACAGACAGATTACTCACTATGCTCGAGGCCGGAAACACTCCATGAGTTTGATGACCAATCAAACAAGCATGCTCCGAAGGGT
TCAAATACGAAGGCCTAAGTTCAACCACACAAAGGGTTTGCACGAGGCAAGGAGCATGGGCGGCAAGGCGTGCGGCATGGGCGGCAGGGGTGCTAGCGGGCGTGTGGCGC
GTGCGGGCGGCAGGTCGTGGTGTATGCTGGGCGGCAAGCGGGGCGTACATGGGCAGGCGACGTGCACAAAGGTTGGCGCACGGTGGGGCGCTATTAGGTTAGCGCGACAG
GAGCGCACGCTTGCAAGATCGGTCCCGGTCGAGATCTTGGACAGCCCTTCAATCTTGGAGCCAGATGTGATGGAGGTTTACACCCCATCACCCTCTTGGATGGACCCAAT
CGTGGAGTTCATCAAAGGAAATCCACTGCAAGATCCGAATGAGCAAAGGAAGATGGCACGGAGAGCAGCGCGGTTCACACTCCGAGAAGGAGCATTGTACCGACGTGGCT
TCTCCTTGCCTCTGCTTAAAGTAGAGCAGTACGAGTCAGCGAAGAACGAAGAAGAGCTACTCCTTAACCTGGACTTATTGGAAGAAAAAAGGGAAAGGGCTCAGCTACGC
CTAGCAGAATATCAAAACAGAATGGCCAGACATTATAATGCCCGAGTCCGACCTGGAACGTATATGCTGGTCGACCTGGAAGGAAGAGTGCTTACGCATCCATGGAACGC
GGAGCGCTTGAAGCGTTATTACCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTAAATGACCAACAGGTGACATTTTCTGTTTTTAATGCTATTAAGTTTCCTGCTGACGTGGAAGAATATTATTTGTTGAGAATAGCAGATGACTTGCTGACAGA
GGAGATACAACTTGAGAAGCTGTTAGATCAGTTGGAAGAGGAGTTGCACATCATCTTCGAAGAAGAAGAGAAAGAAGCAATGTTGCTCAAGCTCAATGAAGGAGGAACAC
CCGCAGATATAGTGTTCAGCAGGACATTTGAAGCACTGTACTTAAAAGACAGAGAACAAGCACTGCTACAACCTTCGGTGGAAAAAGCCCCTGAGCTGGAAATGAAAGTT
CTGCCTTCACACCTGAATCGTACCATGAACAGACAGATTACTCACTATGCTCGAGGCCGGAAACACTCCATGAGTTTGATGACCAATCAAACAAGCATGCTCCGAAGGGT
TCAAATACGAAGGCCTAAGTTCAACCACACAAAGGGTTTGCACGAGGCAAGGAGCATGGGCGGCAAGGCGTGCGGCATGGGCGGCAGGGGTGCTAGCGGGCGTGTGGCGC
GTGCGGGCGGCAGGTCGTGGTGTATGCTGGGCGGCAAGCGGGGCGTACATGGGCAGGCGACGTGCACAAAGGTTGGCGCACGGTGGGGCGCTATTAGGTTAGCGCGACAG
GAGCGCACGCTTGCAAGATCGGTCCCGGTCGAGATCTTGGACAGCCCTTCAATCTTGGAGCCAGATGTGATGGAGGTTTACACCCCATCACCCTCTTGGATGGACCCAAT
CGTGGAGTTCATCAAAGGAAATCCACTGCAAGATCCGAATGAGCAAAGGAAGATGGCACGGAGAGCAGCGCGGTTCACACTCCGAGAAGGAGCATTGTACCGACGTGGCT
TCTCCTTGCCTCTGCTTAAAGTAGAGCAGTACGAGTCAGCGAAGAACGAAGAAGAGCTACTCCTTAACCTGGACTTATTGGAAGAAAAAAGGGAAAGGGCTCAGCTACGC
CTAGCAGAATATCAAAACAGAATGGCCAGACATTATAATGCCCGAGTCCGACCTGGAACGTATATGCTGGTCGACCTGGAAGGAAGAGTGCTTACGCATCCATGGAACGC
GGAGCGCTTGAAGCGTTATTACCCTTGA
Protein sequenceShow/hide protein sequence
MRVNDQQVTFSVFNAIKFPADVEEYYLLRIADDLLTEEIQLEKLLDQLEEELHIIFEEEEKEAMLLKLNEGGTPADIVFSRTFEALYLKDREQALLQPSVEKAPELEMKV
LPSHLNRTMNRQITHYARGRKHSMSLMTNQTSMLRRVQIRRPKFNHTKGLHEARSMGGKACGMGGRGASGRVARAGGRSWCMLGGKRGVHGQATCTKVGARWGAIRLARQ
ERTLARSVPVEILDSPSILEPDVMEVYTPSPSWMDPIVEFIKGNPLQDPNEQRKMARRAARFTLREGALYRRGFSLPLLKVEQYESAKNEEELLLNLDLLEEKRERAQLR
LAEYQNRMARHYNARVRPGTYMLVDLEGRVLTHPWNAERLKRYYP