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Moc07g11150 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g11150
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr7:8561731..8564457
RNA-Seq ExpressionMoc07g11150
SyntenyMoc07g11150
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]3.3e-3357.14Show/hide
Query:  VYFFDLPLACMTKAMEIHLGNAIDSYSDVDYYENDCSWGFRLRVRILIDIIKPLRQGIKLNLDGPIGGCWVPIQYEQLLDFCYHCGLLNHVFNDCESYFT
        V+FFDL LACM K M   LGNAI  + DV+   N+  WG  LRVR+  D++KPL +GIKLNLDGP+GGCW+PIQYE+L DF YHCG L+H+  DC     
Subjt:  VYFFDLPLACMTKAMEIHLGNAIDSYSDVDYYENDCSWGFRLRVRILIDIIKPLRQGIKLNLDGPIGGCWVPIQYEQLLDFCYHCGLLNHVFNDCESYFT

Query:  AAGSLLKRHQYGPWFRYQG
           S+ K  QYGPW R+QG
Subjt:  AAGSLLKRHQYGPWFRYQG

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]5.6e-3352.76Show/hide
Query:  VYFFDLPLACMTKAMEIHLGNAIDSYSDVDYYENDCSWGFRLRVRILIDIIKPLRQGIKLNLDGPIGGCWVPIQYEQLLDFCYHCGLLNHVFNDCES-YF
        ++ FDLP++ + K M I LGNAI ++ DVD  E   SWG  LR+R+LIDI KPLR+GIK+N+DGP+GGCW+PIQYE+L DFCY CG++ H  +DC++ Y 
Subjt:  VYFFDLPLACMTKAMEIHLGNAIDSYSDVDYYENDCSWGFRLRVRILIDIIKPLRQGIKLNLDGPIGGCWVPIQYEQLLDFCYHCGLLNHVFNDCES-YF

Query:  TAAGSLLKRHQYGPWFRYQGSLQYKQK
         A        +YGPW R+ GS    QK
Subjt:  TAAGSLLKRHQYGPWFRYQGSLQYKQK

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]7.5e-3044.1Show/hide
Query:  VYFFDLPLACMTKAMEIHLGNAIDSYSDVDYYENDCSWGFRLRVRILIDIIKPLRQGIKLNLDGPIGGCWVPIQYEQLLDFCYHCGLLNHVFNDCESYFT
        V FFDLPL C+T+ M I LGNA+  + + D  + +  WG  LRVR+++DI KPLR+GIKLNLDGPIGG W+PIQYE+L DFCYHCGL             
Subjt:  VYFFDLPLACMTKAMEIHLGNAIDSYSDVDYYENDCSWGFRLRVRILIDIIKPLRQGIKLNLDGPIGGCWVPIQYEQLLDFCYHCGLLNHVFNDCESYFT

Query:  AAGSLLKRHQYGPWFRYQGSL-----QYKQKQ----------SHHSKSSSYVQGSSDDQHA-FNNQASLPVVPSSTAYP-----PRQSGVSPVAV
           S  K+HQYG W RYQG++     Q KQ Q          S  S +S    GS   Q A      ++P+    T  P     P Q G SPV +
Subjt:  AAGSLLKRHQYGPWFRYQGSL-----QYKQKQ----------SHHSKSSSYVQGSSDDQHA-FNNQASLPVVPSSTAYP-----PRQSGVSPVAV

XP_028117212.1 uncharacterized protein LOC114314884 [Camellia sinensis]1.1e-1742.86Show/hide
Query:  VYFFDLPLACMTKAMEIHLGNAIDSYSDVDYYENDCSWGFRLRVRILIDIIKPLRQGIKLNLDG--PIGGCWVPIQYEQLLDFCYHCGLLNHVFNDC-ES
        V+  +LPL  MT+ + + LGN +  + D++Y +   +WG  L +RI I+I KPLR+G+KL L G  P+   W+ +QYE+L +FC+HCGLL H  +DC   
Subjt:  VYFFDLPLACMTKAMEIHLGNAIDSYSDVDYYENDCSWGFRLRVRILIDIIKPLRQGIKLNLDG--PIGGCWVPIQYEQLLDFCYHCGLLNHVFNDC-ES

Query:  YFTAAGSLLKRHQYGPWFR
            A     R QYGPW R
Subjt:  YFTAAGSLLKRHQYGPWFR

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]1.4e-1539.23Show/hide
Query:  SGLFLQRVYFF----DLPLACMTKAMEIHLGNAIDSYSDVDYYENDCSWGFRLRVRILIDIIKPLRQGIKLNLDG--PIGGCWVPIQYEQLLDFCYHCGL
        S + L RV F+    +LPL  M K +   +GNA+  + D+DY +    WG  +R+R+ +D+ KPLR+G+KL L    PI   WV  +YE+L  +CY CG 
Subjt:  SGLFLQRVYFF----DLPLACMTKAMEIHLGNAIDSYSDVDYYENDCSWGFRLRVRILIDIIKPLRQGIKLNLDG--PIGGCWVPIQYEQLLDFCYHCGL

Query:  LNHVFNDCESYFTAA-GSLLKRHQYGPWFR
        L H   +C+   ++A GS +   QYG W R
Subjt:  LNHVFNDCESYFTAA-GSLLKRHQYGPWFR

TrEMBL top hitse value%identityAlignment
A0A1R3HC77 Reverse transcriptase9.6e-1538.52Show/hide
Query:  VYFFDLPLACMTKAMEIHLGNAIDSYSDVDYYENDCSWGFRLRVRILIDIIKPLRQGIKLNLDGPIGGCWVPIQYEQLLDFCYHCGLLNHVFNDCESYFT
        V    LPLACM ++  I +G  I+   +VD      +WG  LRVRI +++++PL+ G ++NL   +G   +P +YE+L DFCY CG L+HV ++C   +T
Subjt:  VYFFDLPLACMTKAMEIHLGNAIDSYSDVDYYENDCSWGFRLRVRILIDIIKPLRQGIKLNLDGPIGGCWVPIQYEQLLDFCYHCGLLNHVFNDCESYFT

Query:  AAGSLLK-RHQYGPWFRYQGSL
           +  K    YGPW R +  L
Subjt:  AAGSLLK-RHQYGPWFRYQGSL

A0A2I4HPL5 uncharacterized protein LOC1090201291.3e-1439.82Show/hide
Query:  DLPLACMTKAMEIHLGNAIDSYSDVDYYENDCSWGFRLRVRILIDIIKPLRQGIKLNLDGPIGGCWVPIQYEQLLDFCYHCGLLNHVFNDCESYFTAAGS
        DLP A M     ++L   +     VD   +   WG  LRV++L+DI KPL +G +L+LD      W+P +YE+L +FCYHCG++ H    CES      S
Subjt:  DLPLACMTKAMEIHLGNAIDSYSDVDYYENDCSWGFRLRVRILIDIIKPLRQGIKLNLDGPIGGCWVPIQYEQLLDFCYHCGLLNHVFNDCESYFTAAGS

Query:  LLK-RHQYGPWFR
        +     QYGPW R
Subjt:  LLK-RHQYGPWFR

A0A6J1BSZ1 uncharacterized protein LOC1110054811.6e-3357.14Show/hide
Query:  VYFFDLPLACMTKAMEIHLGNAIDSYSDVDYYENDCSWGFRLRVRILIDIIKPLRQGIKLNLDGPIGGCWVPIQYEQLLDFCYHCGLLNHVFNDCESYFT
        V+FFDL LACM K M   LGNAI  + DV+   N+  WG  LRVR+  D++KPL +GIKLNLDGP+GGCW+PIQYE+L DF YHCG L+H+  DC     
Subjt:  VYFFDLPLACMTKAMEIHLGNAIDSYSDVDYYENDCSWGFRLRVRILIDIIKPLRQGIKLNLDGPIGGCWVPIQYEQLLDFCYHCGLLNHVFNDCESYFT

Query:  AAGSLLKRHQYGPWFRYQG
           S+ K  QYGPW R+QG
Subjt:  AAGSLLKRHQYGPWFRYQG

A0A6J1DU55 uncharacterized protein LOC1110231352.7e-3352.76Show/hide
Query:  VYFFDLPLACMTKAMEIHLGNAIDSYSDVDYYENDCSWGFRLRVRILIDIIKPLRQGIKLNLDGPIGGCWVPIQYEQLLDFCYHCGLLNHVFNDCES-YF
        ++ FDLP++ + K M I LGNAI ++ DVD  E   SWG  LR+R+LIDI KPLR+GIK+N+DGP+GGCW+PIQYE+L DFCY CG++ H  +DC++ Y 
Subjt:  VYFFDLPLACMTKAMEIHLGNAIDSYSDVDYYENDCSWGFRLRVRILIDIIKPLRQGIKLNLDGPIGGCWVPIQYEQLLDFCYHCGLLNHVFNDCES-YF

Query:  TAAGSLLKRHQYGPWFRYQGSLQYKQK
         A        +YGPW R+ GS    QK
Subjt:  TAAGSLLKRHQYGPWFRYQGSLQYKQK

A0A6J1DX30 uncharacterized protein LOC1110248743.6e-3044.1Show/hide
Query:  VYFFDLPLACMTKAMEIHLGNAIDSYSDVDYYENDCSWGFRLRVRILIDIIKPLRQGIKLNLDGPIGGCWVPIQYEQLLDFCYHCGLLNHVFNDCESYFT
        V FFDLPL C+T+ M I LGNA+  + + D  + +  WG  LRVR+++DI KPLR+GIKLNLDGPIGG W+PIQYE+L DFCYHCGL             
Subjt:  VYFFDLPLACMTKAMEIHLGNAIDSYSDVDYYENDCSWGFRLRVRILIDIIKPLRQGIKLNLDGPIGGCWVPIQYEQLLDFCYHCGLLNHVFNDCESYFT

Query:  AAGSLLKRHQYGPWFRYQGSL-----QYKQKQ----------SHHSKSSSYVQGSSDDQHA-FNNQASLPVVPSSTAYP-----PRQSGVSPVAV
           S  K+HQYG W RYQG++     Q KQ Q          S  S +S    GS   Q A      ++P+    T  P     P Q G SPV +
Subjt:  AAGSLLKRHQYGPWFRYQGSL-----QYKQKQ----------SHHSKSSSYVQGSSDDQHA-FNNQASLPVVPSSTAYP-----PRQSGVSPVAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGAAGCTCGCTCTCCAGTTAAATTATCGATCCGTCCAGCTGGAGTCAGACTCTTCAAGCTATTGAGCTTCTCAAAGGGGACAAAGCGATTTGGTTGGAGC
TTGGCACCTGGGTTGAGGATATCAGAAATTCCATGGAAGATTTCACCCAGATTTCATTCTTACATTGAAACGTCTGTGGACATTGACTCGTCTTCTATCTTGGGA
ATAGGGCATCGCCTTGACCAAGGTTTGGTTGGCAAGCTCCTTTCTGGATTATTTCTTCAACGGGTATACTTCTTTGATCTCCCTCTTGCTTGTATGACTAAAGCA
ATGGAAATACACCTTGGTAATGCAATTGACTCATATTCGGATGTTGACTATTATGAAAATGATTGCTCTTGGGGATTTAGACTTCGAGTCCGAATTCTAATTGAC
ATCATAAAGCCTTTGCGGCAAGGAATTAAGCTAAACTTAGATGGTCCAATTGGTGGTTGTTGGGTTCCAATTCAATATGAGCAGCTTCTTGATTTTTGCTACCAT
TGTGGATTACTTAATCATGTCTTTAATGATTGTGAAAGTTACTTTACTGCTGCAGGTTCTTTATTGAAACGCCATCAGTATGGTCCTTGGTTTCGTTACCAAGGT
TCTCTCCAGTACAAGCAAAAACAATCCCATCACTCGAAATCTTCTTCTTATGTACAGGGGAGTTCTGATGATCAACACGCCTTCAACAATCAGGCATCTCTGCCA
GTGGTACCTTCCTCCACGGCTTATCCCCCCAGGCAGTCAGGTGTCTCACCAGTAGCTGTCCCGTTGGTAGCACAATCTGTAACTGCTTCAAATTTTGTGGGATCA
CATACCACTTTAGGAAAGCTATTGACCACCATTATCTTCGAGATATGGATTTTACTGACAGCATGTTTACTTGGAGTTCGATGCACGCACCTCAATTGGTCCAAA
TCGGACCATAGAGCCATTGCTCTTGATCTTCCTTCACGGGCGTTCACAAAGCTTCCAATTAAAAATAAATTATTCCGATTTGATGAATGTTGGATGCATGATACT
GATTATGAATTAATTATCAAGCGGGATGGCCTTTGGGATGCTTCTAATGTTACACTTTTGGCTAGTCTTGAAGTTGCCTATCTAGAGCTACAAGAGTTGGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGAAGCTCGCTCTCCAGTTAAATTATCGATCCGTCCAGCTGGAGTCAGACTCTTCAAGCTATTGAGCTTCTCAAAGGGGACAAAGCGATTTGGTTGGAGC
TTGGCACCTGGGTTGAGGATATCAGAAATTCCATGGAAGATTTCACCCAGATTTCATTCTTACATTGAAACGTCTGTGGACATTGACTCGTCTTCTATCTTGGGA
ATAGGGCATCGCCTTGACCAAGGTTTGGTTGGCAAGCTCCTTTCTGGATTATTTCTTCAACGGGTATACTTCTTTGATCTCCCTCTTGCTTGTATGACTAAAGCA
ATGGAAATACACCTTGGTAATGCAATTGACTCATATTCGGATGTTGACTATTATGAAAATGATTGCTCTTGGGGATTTAGACTTCGAGTCCGAATTCTAATTGAC
ATCATAAAGCCTTTGCGGCAAGGAATTAAGCTAAACTTAGATGGTCCAATTGGTGGTTGTTGGGTTCCAATTCAATATGAGCAGCTTCTTGATTTTTGCTACCAT
TGTGGATTACTTAATCATGTCTTTAATGATTGTGAAAGTTACTTTACTGCTGCAGGTTCTTTATTGAAACGCCATCAGTATGGTCCTTGGTTTCGTTACCAAGGT
TCTCTCCAGTACAAGCAAAAACAATCCCATCACTCGAAATCTTCTTCTTATGTACAGGGGAGTTCTGATGATCAACACGCCTTCAACAATCAGGCATCTCTGCCA
GTGGTACCTTCCTCCACGGCTTATCCCCCCAGGCAGTCAGGTGTCTCACCAGTAGCTGTCCCGTTGGTAGCACAATCTGTAACTGCTTCAAATTTTGTGGGATCA
CATACCACTTTAGGAAAGCTATTGACCACCATTATCTTCGAGATATGGATTTTACTGACAGCATGTTTACTTGGAGTTCGATGCACGCACCTCAATTGGTCCAAA
TCGGACCATAGAGCCATTGCTCTTGATCTTCCTTCACGGGCGTTCACAAAGCTTCCAATTAAAAATAAATTATTCCGATTTGATGAATGTTGGATGCATGATACT
GATTATGAATTAATTATCAAGCGGGATGGCCTTTGGGATGCTTCTAATGTTACACTTTTGGCTAGTCTTGAAGTTGCCTATCTAGAGCTACAAGAGTTGGGGTAA
Protein sequenceShow/hide protein sequence
MSEARSPVKLSIRPAGVRLFKLLSFSKGTKRFGWSLAPGLRISEIPWKISPRFHSYIETSVDIDSSSILGIGHRLDQGLVGKLLSGLFLQRVYFFDLPLACMTKA
MEIHLGNAIDSYSDVDYYENDCSWGFRLRVRILIDIIKPLRQGIKLNLDGPIGGCWVPIQYEQLLDFCYHCGLLNHVFNDCESYFTAAGSLLKRHQYGPWFRYQG
SLQYKQKQSHHSKSSSYVQGSSDDQHAFNNQASLPVVPSSTAYPPRQSGVSPVAVPLVAQSVTASNFVGSHTTLGKLLTTIIFEIWILLTACLLGVRCTHLNWSK
SDHRAIALDLPSRAFTKLPIKNKLFRFDECWMHDTDYELIIKRDGLWDASNVTLLASLEVAYLELQELG