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Moc07g11230 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g11230
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr7:8666903..8668469
RNA-Seq ExpressionMoc07g11230
SyntenyMoc07g11230
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038045.1 uncharacterized protein E6C27_scaffold36G002470 [Cucumis melo var. makuwa]2.0e-0443.04Show/hide
Query:  KASRQRDKSVEAYYDGMCSLLEELNVYEHEETNMDRFYDGLNGEIAKVIAEREEIRPCTRLDEMLHLAKRL-KESSTRI
        +A RQ +KSVE YY+ M +L++ L++ E  ET M +F +GLN    K I ++ +++P + ++EMLHLA ++ K+ STRI
Subjt:  KASRQRDKSVEAYYDGMCSLLEELNVYEHEETNMDRFYDGLNGEIAKVIAEREEIRPCTRLDEMLHLAKRL-KESSTRI
KAA0051791.1 hypothetical protein E6C27_scaffold60G001990 [Cucumis melo var. makuwa]5.3e-0540.62Show/hide
Query:  DKSVEAYYDGMCSLLEELNVYEHEETNMDRFYDGLNGEIAKVIAEREEIRPCTRLDEMLHLAKR
        ++  E  Y+ M  LLE++ +YE +E  ++RFY+GLN E  +++ + EEIR C  L++M+H+A R
Subjt:  DKSVEAYYDGMCSLLEELNVYEHEETNMDRFYDGLNGEIAKVIAEREEIRPCTRLDEMLHLAKR
TrEMBL top hitse value%identityAlignment
A0A5A7T993 Retrotrans_gag domain-containing protein9.7e-0543.04Show/hide
Query:  KASRQRDKSVEAYYDGMCSLLEELNVYEHEETNMDRFYDGLNGEIAKVIAEREEIRPCTRLDEMLHLAKRL-KESSTRI
        +A RQ +KSVE YY+ M +L++ L++ E  ET M +F +GLN    K I ++ +++P + ++EMLHLA ++ K+ STRI
Subjt:  KASRQRDKSVEAYYDGMCSLLEELNVYEHEETNMDRFYDGLNGEIAKVIAEREEIRPCTRLDEMLHLAKRL-KESSTRI
A0A5A7UE26 Uncharacterized protein2.6e-0540.62Show/hide
Query:  DKSVEAYYDGMCSLLEELNVYEHEETNMDRFYDGLNGEIAKVIAEREEIRPCTRLDEMLHLAKR
        ++  E  Y+ M  LLE++ +YE +E  ++RFY+GLN E  +++ + EEIR C  L++M+H+A R
Subjt:  DKSVEAYYDGMCSLLEELNVYEHEETNMDRFYDGLNGEIAKVIAEREEIRPCTRLDEMLHLAKR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTACAAAGCCACGAGAATATCTTCATTGGGAAGACCAAGTCGAGAGCATCTTTGCACAACACCATTGGAGTGAAAGCATCAAGACAAAGGGACAAAAGTGTTGA
AGCTTACTACGACGGGATGTGCTCATTACTTGAAGAGCTTAATGTATATGAACATGAGGAGACCAACATGGATCGGTTCTACGATGGACTCAATGGAGAGATTGCCAAGG
TGATTGCAGAAAGAGAAGAAATTCGACCTTGTACTAGGTTGGATGAAATGTTACACCTTGCCAAGAGATTGAAAGAGTCATCAACGAGAATCTTCAAGAAAATAAAGAGC
ATGAAATATTTTGTGGAACTATGTATGGAAATACCTTCTACTAGTGATAGCAAAGTATTGCATGAATTTATATCTATTGTTGAGGAAGGAAGTATTAAGGTTGATAATGA
AATACTTTGTGATGTTATGCATGTTGATCTTAATCCACTAGATTGCAAAGTATTACACGATTGTATGCCTATTGATGAAAAGGTAACTGGAACAATTGAAGAGAAAACAT
CTTGTGAATCAATGCATGAAAATCTTATTCCAATTAATTACAAGTTGTTGCATGACATCTTACCTATTGTTGGGGAAAAATGTGCTGAGGACTTACATAAAGAAGAACTC
CAAATGATGAGATGGAGCCAAATGGAGGAAGTTCTTGAGCTAAAGTCAAACTTATCCAAGCTAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTACAAAGCCACGAGAATATCTTCATTGGGAAGACCAAGTCGAGAGCATCTTTGCACAACACCATTGGAGTGAAAGCATCAAGACAAAGGGACAAAAGTGTTGA
AGCTTACTACGACGGGATGTGCTCATTACTTGAAGAGCTTAATGTATATGAACATGAGGAGACCAACATGGATCGGTTCTACGATGGACTCAATGGAGAGATTGCCAAGG
TGATTGCAGAAAGAGAAGAAATTCGACCTTGTACTAGGTTGGATGAAATGTTACACCTTGCCAAGAGATTGAAAGAGTCATCAACGAGAATCTTCAAGAAAATAAAGAGC
ATGAAATATTTTGTGGAACTATGTATGGAAATACCTTCTACTAGTGATAGCAAAGTATTGCATGAATTTATATCTATTGTTGAGGAAGGAAGTATTAAGGTTGATAATGA
AATACTTTGTGATGTTATGCATGTTGATCTTAATCCACTAGATTGCAAAGTATTACACGATTGTATGCCTATTGATGAAAAGGTAACTGGAACAATTGAAGAGAAAACAT
CTTGTGAATCAATGCATGAAAATCTTATTCCAATTAATTACAAGTTGTTGCATGACATCTTACCTATTGTTGGGGAAAAATGTGCTGAGGACTTACATAAAGAAGAACTC
CAAATGATGAGATGGAGCCAAATGGAGGAAGTTCTTGAGCTAAAGTCAAACTTATCCAAGCTAGTTTGA
Protein sequenceShow/hide protein sequence
MEVQSHENIFIGKTKSRASLHNTIGVKASRQRDKSVEAYYDGMCSLLEELNVYEHEETNMDRFYDGLNGEIAKVIAEREEIRPCTRLDEMLHLAKRLKESSTRIFKKIKS
MKYFVELCMEIPSTSDSKVLHEFISIVEEGSIKVDNEILCDVMHVDLNPLDCKVLHDCMPIDEKVTGTIEEKTSCESMHENLIPINYKLLHDILPIVGEKCAEDLHKEEL
QMMRWSQMEEVLELKSNLSKLV