; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc07g11260 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g11260
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr7:8700719..8703492
RNA-Seq ExpressionMoc07g11260
SyntenyMoc07g11260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051952.1 gag/pol protein [Cucumis melo var. makuwa]2.9e-5345.73Show/hide
Query:  MSTSIIALLAVKKLNSENYKQWKSNLNTILVIDDLRFVLQEDCPQVSAPNATVAVRNVYDRWIKANDKTKVYILASISDVLAKKHEDTVTAKEIMDLLQS
        M+++ + +LA  KLN  NY  WK+ +NT+L+IDDLRFVL E+CPQV A NAT  VR  Y+RW KAN+K + YILAS+S+VLAKKHE  +TA+EIMD LQ 
Subjt:  MSTSIIALLAVKKLNSENYKQWKSNLNTILVIDDLRFVLQEDCPQVSAPNATVAVRNVYDRWIKANDKTKVYILASISDVLAKKHEDTVTAKEIMDLLQS

Query:  MFGQSSSQARHEALKFIYNSQSNE----------------------AVIDEQSQVSFILESLPKSFLPFRINAVMNKLEYTLTTLLNELQIYYKTFK---
        MFGQ+S Q +H+ALK+IYN++ NE                      AVIDE SQVSFILESLP+SFL FR NAVMNK+ YTLTTLLNELQ +    K   
Subjt:  MFGQSSSQARHEALKFIYNSQSNE----------------------AVIDEQSQVSFILESLPKSFLPFRINAVMNKLEYTLTTLLNELQIYYKTFK---

Query:  ----------------------------------KKKAAGKGSKPDSTIAAAKKGKTKVAEKGKCFTAIWTA-LEAQLPKILGGKEESQRREL
                                          KKK  G+G+K  + +AAAK  K   A KG CF        +   PK L  K+++++ ++
Subjt:  ----------------------------------KKKAAGKGSKPDSTIAAAKKGKTKVAEKGKCFTAIWTA-LEAQLPKILGGKEESQRREL

KAA0062993.1 gag/pol protein [Cucumis melo var. makuwa]2.9e-5347.08Show/hide
Query:  HSATALPLGVEALSQVFFSVFPWLRMSTSIIALLAVKKLNSENYKQWKSNLNTILVIDDLRFVLQEDCPQVSAPNATVAVRNVYDRWIKANDKTKVYILA
        H   A P G  A   +   VF  L M+++ + +LA  KLN  NY  WK+ +NT+L+IDDLRFVL ++CPQV A NAT  VR  Y+RW KAN+K + YILA
Subjt:  HSATALPLGVEALSQVFFSVFPWLRMSTSIIALLAVKKLNSENYKQWKSNLNTILVIDDLRFVLQEDCPQVSAPNATVAVRNVYDRWIKANDKTKVYILA

Query:  SISDVLAKKHEDTVTAKEIMDLLQSMFGQSSSQARHEALKFIYNSQSNE----------------------AVIDEQSQVSFILESLPKSFLPFRINAVM
        S+S+VLAKKHE  +TA+EIMD LQ MFGQ+S Q +H+ALK+IYN++ NE                      AVIDE SQVSFILESLP+SFL FR NAVM
Subjt:  SISDVLAKKHEDTVTAKEIMDLLQSMFGQSSSQARHEALKFIYNSQSNE----------------------AVIDEQSQVSFILESLPKSFLPFRINAVM

Query:  NKLEYTLTTLLNELQIYYKTFK-------------------------------------KKKAAGKGSKPDSTIAAAKKGKTKVAEKGKCF
        NK+ YTLTTLLNELQ +    K                                     KKK  G+G+K  + +AAAK  K   A KG CF
Subjt:  NKLEYTLTTLLNELQIYYKTFK-------------------------------------KKKAAGKGSKPDSTIAAAKKGKTKVAEKGKCF

KAA0066490.1 gag/pol protein [Cucumis melo var. makuwa]2.9e-5355.92Show/hide
Query:  MSTSIIALLAVKKLNSENYKQWKSNLNTILVIDDLRFVLQEDCPQVSAPNATVAVRNVYDRWIKANDKTKVYILASISDVLAKKHEDTVTAKEIMDLLQS
        M+++ + +LA  KLN  NY  WK+ +NT+L+IDDLRFVL E+CPQV A NAT  VR  Y+RW KAN+K + YILAS+S+VLAKKHE  +TA+EIMD LQ 
Subjt:  MSTSIIALLAVKKLNSENYKQWKSNLNTILVIDDLRFVLQEDCPQVSAPNATVAVRNVYDRWIKANDKTKVYILASISDVLAKKHEDTVTAKEIMDLLQS

Query:  MFGQSSSQARHEALKFIYNSQSNE----------------------AVIDEQSQVSFILESLPKSFLPFRINAVMNKLEYTLTTLLNELQIYYKTFKKKK
        MFGQ+S Q +H+ALK+IYN++ NE                      AVIDE SQVSFILESLP+SFL FR NAVMNK+ YTLTTLLNELQ +    K K 
Subjt:  MFGQSSSQARHEALKFIYNSQSNE----------------------AVIDEQSQVSFILESLPKSFLPFRINAVMNKLEYTLTTLLNELQIYYKTFKKKK

Query:  AAGKGSKPDST
          G+ +   ST
Subjt:  AAGKGSKPDST

XP_022158062.1 uncharacterized protein LOC111024637 [Momordica charantia]3.7e-5666.15Show/hide
Query:  MSTSIIALLAVKKLNSENYKQWKSNLNTILVIDDLRFVLQEDCPQVSAPNATVAVRNVYDRWIKANDKTKVYILASISDVLAKKHEDTVTAKEIMDLLQS
        MSTSII LL  +KLN ENYKQWKSN+NTIL+IDDLRFVLQEDCPQ  APNATVAVRN+YDRWIKANDK KV ILASISDVLAKKHE++V  KEIMD LQS
Subjt:  MSTSIIALLAVKKLNSENYKQWKSNLNTILVIDDLRFVLQEDCPQVSAPNATVAVRNVYDRWIKANDKTKVYILASISDVLAKKHEDTVTAKEIMDLLQS

Query:  MFGQSSSQARHEALKFIYNS----------------------QSNEAVIDEQSQVSFILESLPKSFLPFRINAVMNKL------EYTLTTLLNEL
        MFGQ SSQARHEAL  IYNS                      +SN  VIDEQSQV FILESLPK+FLPF  NA ++ L      E TL   + E+
Subjt:  MFGQSSSQARHEALKFIYNS----------------------QSNEAVIDEQSQVSFILESLPKSFLPFRINAVMNKL------EYTLTTLLNEL

XP_022158197.1 uncharacterized protein LOC111024734 [Momordica charantia]3.0e-5873.41Show/hide
Query:  MSTSIIALLAVKKLNSENYKQWKSNLNTILVIDDLRFVLQEDCPQVSAPNATVAVRNVYDRWIKANDKTKVYILASISDVLAKKHEDTVTAKEIMDLLQS
        MS SIIALLA +KLN ENY+QWKSNLNTILVIDDLRFVLQEDCPQ    NATVAVRN YDRWIK+NDK KVYILASISDVLAKKHEDTVT KEIMD LQS
Subjt:  MSTSIIALLAVKKLNSENYKQWKSNLNTILVIDDLRFVLQEDCPQVSAPNATVAVRNVYDRWIKANDKTKVYILASISDVLAKKHEDTVTAKEIMDLLQS

Query:  MFGQSSSQARHEALKFIYNS----------------------QSNEAVIDEQSQVSFILESLPKSFLPFRINA
        MFGQ S QARHEALKF+YNS                      +SN  VIDEQSQ SFILESLPK+FLPF  NA
Subjt:  MFGQSSSQARHEALKFIYNS----------------------QSNEAVIDEQSQVSFILESLPKSFLPFRINA

TrEMBL top hitse value%identityAlignment
A0A5A7U869 Gag/pol protein1.4e-5345.73Show/hide
Query:  MSTSIIALLAVKKLNSENYKQWKSNLNTILVIDDLRFVLQEDCPQVSAPNATVAVRNVYDRWIKANDKTKVYILASISDVLAKKHEDTVTAKEIMDLLQS
        M+++ + +LA  KLN  NY  WK+ +NT+L+IDDLRFVL E+CPQV A NAT  VR  Y+RW KAN+K + YILAS+S+VLAKKHE  +TA+EIMD LQ 
Subjt:  MSTSIIALLAVKKLNSENYKQWKSNLNTILVIDDLRFVLQEDCPQVSAPNATVAVRNVYDRWIKANDKTKVYILASISDVLAKKHEDTVTAKEIMDLLQS

Query:  MFGQSSSQARHEALKFIYNSQSNE----------------------AVIDEQSQVSFILESLPKSFLPFRINAVMNKLEYTLTTLLNELQIYYKTFK---
        MFGQ+S Q +H+ALK+IYN++ NE                      AVIDE SQVSFILESLP+SFL FR NAVMNK+ YTLTTLLNELQ +    K   
Subjt:  MFGQSSSQARHEALKFIYNSQSNE----------------------AVIDEQSQVSFILESLPKSFLPFRINAVMNKLEYTLTTLLNELQIYYKTFK---

Query:  ----------------------------------KKKAAGKGSKPDSTIAAAKKGKTKVAEKGKCFTAIWTA-LEAQLPKILGGKEESQRREL
                                          KKK  G+G+K  + +AAAK  K   A KG CF        +   PK L  K+++++ ++
Subjt:  ----------------------------------KKKAAGKGSKPDSTIAAAKKGKTKVAEKGKCFTAIWTA-LEAQLPKILGGKEESQRREL

A0A5A7V4M1 Gag/pol protein1.4e-5347.08Show/hide
Query:  HSATALPLGVEALSQVFFSVFPWLRMSTSIIALLAVKKLNSENYKQWKSNLNTILVIDDLRFVLQEDCPQVSAPNATVAVRNVYDRWIKANDKTKVYILA
        H   A P G  A   +   VF  L M+++ + +LA  KLN  NY  WK+ +NT+L+IDDLRFVL ++CPQV A NAT  VR  Y+RW KAN+K + YILA
Subjt:  HSATALPLGVEALSQVFFSVFPWLRMSTSIIALLAVKKLNSENYKQWKSNLNTILVIDDLRFVLQEDCPQVSAPNATVAVRNVYDRWIKANDKTKVYILA

Query:  SISDVLAKKHEDTVTAKEIMDLLQSMFGQSSSQARHEALKFIYNSQSNE----------------------AVIDEQSQVSFILESLPKSFLPFRINAVM
        S+S+VLAKKHE  +TA+EIMD LQ MFGQ+S Q +H+ALK+IYN++ NE                      AVIDE SQVSFILESLP+SFL FR NAVM
Subjt:  SISDVLAKKHEDTVTAKEIMDLLQSMFGQSSSQARHEALKFIYNSQSNE----------------------AVIDEQSQVSFILESLPKSFLPFRINAVM

Query:  NKLEYTLTTLLNELQIYYKTFK-------------------------------------KKKAAGKGSKPDSTIAAAKKGKTKVAEKGKCF
        NK+ YTLTTLLNELQ +    K                                     KKK  G+G+K  + +AAAK  K   A KG CF
Subjt:  NKLEYTLTTLLNELQIYYKTFK-------------------------------------KKKAAGKGSKPDSTIAAAKKGKTKVAEKGKCF

A0A5A7VH46 Gag/pol protein1.4e-5355.92Show/hide
Query:  MSTSIIALLAVKKLNSENYKQWKSNLNTILVIDDLRFVLQEDCPQVSAPNATVAVRNVYDRWIKANDKTKVYILASISDVLAKKHEDTVTAKEIMDLLQS
        M+++ + +LA  KLN  NY  WK+ +NT+L+IDDLRFVL E+CPQV A NAT  VR  Y+RW KAN+K + YILAS+S+VLAKKHE  +TA+EIMD LQ 
Subjt:  MSTSIIALLAVKKLNSENYKQWKSNLNTILVIDDLRFVLQEDCPQVSAPNATVAVRNVYDRWIKANDKTKVYILASISDVLAKKHEDTVTAKEIMDLLQS

Query:  MFGQSSSQARHEALKFIYNSQSNE----------------------AVIDEQSQVSFILESLPKSFLPFRINAVMNKLEYTLTTLLNELQIYYKTFKKKK
        MFGQ+S Q +H+ALK+IYN++ NE                      AVIDE SQVSFILESLP+SFL FR NAVMNK+ YTLTTLLNELQ +    K K 
Subjt:  MFGQSSSQARHEALKFIYNSQSNE----------------------AVIDEQSQVSFILESLPKSFLPFRINAVMNKLEYTLTTLLNELQIYYKTFKKKK

Query:  AAGKGSKPDST
          G+ +   ST
Subjt:  AAGKGSKPDST

A0A6J1DW68 uncharacterized protein LOC1110246371.8e-5666.15Show/hide
Query:  MSTSIIALLAVKKLNSENYKQWKSNLNTILVIDDLRFVLQEDCPQVSAPNATVAVRNVYDRWIKANDKTKVYILASISDVLAKKHEDTVTAKEIMDLLQS
        MSTSII LL  +KLN ENYKQWKSN+NTIL+IDDLRFVLQEDCPQ  APNATVAVRN+YDRWIKANDK KV ILASISDVLAKKHE++V  KEIMD LQS
Subjt:  MSTSIIALLAVKKLNSENYKQWKSNLNTILVIDDLRFVLQEDCPQVSAPNATVAVRNVYDRWIKANDKTKVYILASISDVLAKKHEDTVTAKEIMDLLQS

Query:  MFGQSSSQARHEALKFIYNS----------------------QSNEAVIDEQSQVSFILESLPKSFLPFRINAVMNKL------EYTLTTLLNEL
        MFGQ SSQARHEAL  IYNS                      +SN  VIDEQSQV FILESLPK+FLPF  NA ++ L      E TL   + E+
Subjt:  MFGQSSSQARHEALKFIYNS----------------------QSNEAVIDEQSQVSFILESLPKSFLPFRINAVMNKL------EYTLTTLLNEL

A0A6J1DWL0 uncharacterized protein LOC1110247341.5e-5873.41Show/hide
Query:  MSTSIIALLAVKKLNSENYKQWKSNLNTILVIDDLRFVLQEDCPQVSAPNATVAVRNVYDRWIKANDKTKVYILASISDVLAKKHEDTVTAKEIMDLLQS
        MS SIIALLA +KLN ENY+QWKSNLNTILVIDDLRFVLQEDCPQ    NATVAVRN YDRWIK+NDK KVYILASISDVLAKKHEDTVT KEIMD LQS
Subjt:  MSTSIIALLAVKKLNSENYKQWKSNLNTILVIDDLRFVLQEDCPQVSAPNATVAVRNVYDRWIKANDKTKVYILASISDVLAKKHEDTVTAKEIMDLLQS

Query:  MFGQSSSQARHEALKFIYNS----------------------QSNEAVIDEQSQVSFILESLPKSFLPFRINA
        MFGQ S QARHEALKF+YNS                      +SN  VIDEQSQ SFILESLPK+FLPF  NA
Subjt:  MFGQSSSQARHEALKFIYNS----------------------QSNEAVIDEQSQVSFILESLPKSFLPFRINA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGGATTGGGCAAAAAGTTGCAGAAAACAGCGAAGAACACGAAGCAGACCACGCAAACAGCGCCATGGCACTATGCAGCAGCGCCATGGTGCTGCGGGGACAGC
ACACAGTGCCACGGCGCTGCCCCTAGGCGTTGAGGCGCTGTCCCAGGTGTTTTTCAGCGTCTTTCCGTGGCTCCGCATGTCTACTTCCATTATTGCACTCCTAGCCGTGA
AAAAACTTAACAGCGAGAATTACAAACAATGGAAATCGAATCTAAACACTATTCTCGTGATAGATGATCTTAGGTTCGTCTTGCAAGAAGATTGTCCTCAAGTTTCTGCG
CCTAACGCTACTGTGGCGGTGCGCAACGTCTATGACAGATGGATCAAGGCCAATGACAAGACCAAGGTCTACATCTTGGCGAGCATATCTGATGTGCTTGCTAAGAAGCA
CGAGGACACGGTCACCGCTAAGGAGATCATGGACTTGCTACAGAGCATGTTTGGACAATCGTCCTCACAGGCTCGACATGAAGCCCTTAAGTTCATTTACAACTCCCAGT
CGAACGAGGCTGTCATTGACGAGCAGAGTCAGGTCAGCTTCATTCTGGAATCTCTTCCAAAGAGTTTCCTACCATTCCGCATCAATGCGGTTATGAATAAGCTGGAGTAC
ACTCTTACCACGCTCTTAAACGAGCTGCAGATCTACTATAAGACTTTCAAGAAGAAGAAGGCTGCTGGTAAGGGGTCTAAACCTGACTCCACTATTGCCGCTGCCAAGAA
AGGTAAGACCAAGGTTGCAGAGAAAGGAAAGTGTTTCACTGCAATATGGACGGCATTGGAAGCGCAACTGCCCAAAATACTTGGCGGAAAAGAAGAAAGCCAACGAAGGG
AATTAGTTCCTGGAGGCAGCTTGACGCTGGAGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCGGATTGGGCAAAAAGTTGCAGAAAACAGCGAAGAACACGAAGCAGACCACGCAAACAGCGCCATGGCACTATGCAGCAGCGCCATGGTGCTGCGGGGACAGC
ACACAGTGCCACGGCGCTGCCCCTAGGCGTTGAGGCGCTGTCCCAGGTGTTTTTCAGCGTCTTTCCGTGGCTCCGCATGTCTACTTCCATTATTGCACTCCTAGCCGTGA
AAAAACTTAACAGCGAGAATTACAAACAATGGAAATCGAATCTAAACACTATTCTCGTGATAGATGATCTTAGGTTCGTCTTGCAAGAAGATTGTCCTCAAGTTTCTGCG
CCTAACGCTACTGTGGCGGTGCGCAACGTCTATGACAGATGGATCAAGGCCAATGACAAGACCAAGGTCTACATCTTGGCGAGCATATCTGATGTGCTTGCTAAGAAGCA
CGAGGACACGGTCACCGCTAAGGAGATCATGGACTTGCTACAGAGCATGTTTGGACAATCGTCCTCACAGGCTCGACATGAAGCCCTTAAGTTCATTTACAACTCCCAGT
CGAACGAGGCTGTCATTGACGAGCAGAGTCAGGTCAGCTTCATTCTGGAATCTCTTCCAAAGAGTTTCCTACCATTCCGCATCAATGCGGTTATGAATAAGCTGGAGTAC
ACTCTTACCACGCTCTTAAACGAGCTGCAGATCTACTATAAGACTTTCAAGAAGAAGAAGGCTGCTGGTAAGGGGTCTAAACCTGACTCCACTATTGCCGCTGCCAAGAA
AGGTAAGACCAAGGTTGCAGAGAAAGGAAAGTGTTTCACTGCAATATGGACGGCATTGGAAGCGCAACTGCCCAAAATACTTGGCGGAAAAGAAGAAAGCCAACGAAGGG
AATTAGTTCCTGGAGGCAGCTTGACGCTGGAGAGATGA
Protein sequenceShow/hide protein sequence
MASDWAKSCRKQRRTRSRPRKQRHGTMQQRHGAAGTAHSATALPLGVEALSQVFFSVFPWLRMSTSIIALLAVKKLNSENYKQWKSNLNTILVIDDLRFVLQEDCPQVSA
PNATVAVRNVYDRWIKANDKTKVYILASISDVLAKKHEDTVTAKEIMDLLQSMFGQSSSQARHEALKFIYNSQSNEAVIDEQSQVSFILESLPKSFLPFRINAVMNKLEY
TLTTLLNELQIYYKTFKKKKAAGKGSKPDSTIAAAKKGKTKVAEKGKCFTAIWTALEAQLPKILGGKEESQRRELVPGGSLTLER