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Moc07g11380 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g11380
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr7:8798504..8800571
RNA-Seq ExpressionMoc07g11380
SyntenyMoc07g11380
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFY98609.1 haloacid dehalogenase-like hydrolase (HAD) superfamily protein [Actinidia rufa]1.3e-1765.75Show/hide
Query:  SSKSKLGFIDDTITHPSG---DLLLAWIRNNHVIIAWILNSVSKELYASILFSESTWDIWLDLKERFQKSNGP
        S K+KLGFID +IT P G   +LL +WIRNN+V+I+WILNSVSKE+ ASI+FS S  +IW+DLK+RFQ+SNGP
Subjt:  SSKSKLGFIDDTITHPSG---DLLLAWIRNNHVIIAWILNSVSKELYASILFSESTWDIWLDLKERFQKSNGP
XP_022154608.1 uncharacterized protein LOC111021831 [Momordica charantia]1.9e-2169.74Show/hide
Query:  NLLKKRSSKSKLGFIDDTITHPSGDLLLAWIRNNHVIIAWILNSVSKELYASILFSESTWDIWLDLKERFQKSNGP
        ++L   S K+KLGFID +I+ P G+LL AWI NNHV+IAWILNSVSKE+ +SILFSES  DIW+DLKERF+KSNGP
Subjt:  NLLKKRSSKSKLGFIDDTITHPSGDLLLAWIRNNHVIIAWILNSVSKELYASILFSESTWDIWLDLKERFQKSNGP
XP_022154973.1 uncharacterized protein LOC111022117 [Momordica charantia]2.2e-1762.86Show/hide
Query:  SSKSKLGFIDDTITHPSGDLLLAWIRNNHVIIAWILNSVSKELYASILFSESTWDIWLDLKERFQKSNGP
        S K+KLGFI+ ++  P+GDLL  WIRN HV+IAW LNSVSK + AS++F+ ST +IWLDLK+RFQ  NGP
Subjt:  SSKSKLGFIDDTITHPSGDLLLAWIRNNHVIIAWILNSVSKELYASILFSESTWDIWLDLKERFQKSNGP
XP_022156861.1 uncharacterized protein LOC111023702 [Momordica charantia]4.8e-2062.35Show/hide
Query:  EDPVVVFEGNLLKKRSSKSKLGFIDDTITHPSGDLLLAWIRNNHVIIAWILNSVSKELYASILFSESTWDIWLDLKERFQKSNGP
        ED    +  +++   S K+KL FID  I  PSGDLL AWI NNH++IAWILNSVSKE+ ASILFSES  DIW+DL ERF+KSN P
Subjt:  EDPVVVFEGNLLKKRSSKSKLGFIDDTITHPSGDLLLAWIRNNHVIIAWILNSVSKELYASILFSESTWDIWLDLKERFQKSNGP
XP_024030943.1 uncharacterized protein LOC112094408 [Morus notabilis]2.9e-1764.38Show/hide
Query:  SSKSKLGFIDDTITHPSG---DLLLAWIRNNHVIIAWILNSVSKELYASILFSESTWDIWLDLKERFQKSNGP
        S K+KLGFID +I+ P G   +LL +WIRNN++ I+WILNSVSKE+ ASI+FSES ++IWLDL++RFQ+SNGP
Subjt:  SSKSKLGFIDDTITHPSG---DLLLAWIRNNHVIIAWILNSVSKELYASILFSESTWDIWLDLKERFQKSNGP
TrEMBL top hitse value%identityAlignment
A0A5J5BIH5 Uncharacterized protein1.5e-1658.9Show/hide
Query:  SSKSKLGFIDDTITHPSG---DLLLAWIRNNHVIIAWILNSVSKELYASILFSESTWDIWLDLKERFQKSNGP
        S K+KLGF+D +I  P G   DL+ +WIRNN+++I+WILNSVSKE+ ASI+F+ S  +IWLDL++RFQ+ NGP
Subjt:  SSKSKLGFIDDTITHPSG---DLLLAWIRNNHVIIAWILNSVSKELYASILFSESTWDIWLDLKERFQKSNGP
A0A6J1DKR8 uncharacterized protein LOC1110218319.4e-2269.74Show/hide
Query:  NLLKKRSSKSKLGFIDDTITHPSGDLLLAWIRNNHVIIAWILNSVSKELYASILFSESTWDIWLDLKERFQKSNGP
        ++L   S K+KLGFID +I+ P G+LL AWI NNHV+IAWILNSVSKE+ +SILFSES  DIW+DLKERF+KSNGP
Subjt:  NLLKKRSSKSKLGFIDDTITHPSGDLLLAWIRNNHVIIAWILNSVSKELYASILFSESTWDIWLDLKERFQKSNGP
A0A6J1DLQ9 uncharacterized protein LOC1110221171.1e-1762.86Show/hide
Query:  SSKSKLGFIDDTITHPSGDLLLAWIRNNHVIIAWILNSVSKELYASILFSESTWDIWLDLKERFQKSNGP
        S K+KLGFI+ ++  P+GDLL  WIRN HV+IAW LNSVSK + AS++F+ ST +IWLDLK+RFQ  NGP
Subjt:  SSKSKLGFIDDTITHPSGDLLLAWIRNNHVIIAWILNSVSKELYASILFSESTWDIWLDLKERFQKSNGP
A0A6J1DW89 uncharacterized protein LOC1110237022.3e-2062.35Show/hide
Query:  EDPVVVFEGNLLKKRSSKSKLGFIDDTITHPSGDLLLAWIRNNHVIIAWILNSVSKELYASILFSESTWDIWLDLKERFQKSNGP
        ED    +  +++   S K+KL FID  I  PSGDLL AWI NNH++IAWILNSVSKE+ ASILFSES  DIW+DL ERF+KSN P
Subjt:  EDPVVVFEGNLLKKRSSKSKLGFIDDTITHPSGDLLLAWIRNNHVIIAWILNSVSKELYASILFSESTWDIWLDLKERFQKSNGP
A0A7J0FKC9 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein6.3e-1865.75Show/hide
Query:  SSKSKLGFIDDTITHPSG---DLLLAWIRNNHVIIAWILNSVSKELYASILFSESTWDIWLDLKERFQKSNGP
        S K+KLGFID +IT P G   +LL +WIRNN+V+I+WILNSVSKE+ ASI+FS S  +IW+DLK+RFQ+SNGP
Subjt:  SSKSKLGFIDDTITHPSG---DLLLAWIRNNHVIIAWILNSVSKELYASILFSESTWDIWLDLKERFQKSNGP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21280.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2.1e-0526.36Show/hide
Query:  PSSSPSVGEGEEEECYHKRDPETQE-DSEEDPVVVFEGNLLKKRSSKSKLGFIDDTITHPS--GDLLLAWIRNNHVIIAWILNSVSKELYASILFSESTW
        P+S P        + +H  D   Q+   +ED  V ++           K GFID T+  P     L   W + N +++ W++NS++ +L  S++++E+  
Subjt:  PSSSPSVGEGEEEECYHKRDPETQE-DSEEDPVVVFEGNLLKKRSSKSKLGFIDDTITHPS--GDLLLAWIRNNHVIIAWILNSVSKELYASILFSESTW

Query:  DIWLDLKERF
         +W DL+  F
Subjt:  DIWLDLKERF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACGACTCGCTCTGTAAAGGTTACAGACGACTCGATCCAAGTTGTTCGTGTGGAGACATGCGAGTGGGGGGGAGTGGGAGGTGTTGTGACGTGGGGAGTTACCCC
ACGTCACCCTTCTTCTTCTCCAAGTGTTGGAGAAGGTGAAGAAGAGGAGTGCTACCACAAGCGCGATCCCGAGACCCAAGAGGATAGCGAGGAAGATCCAGTGGTGGTGT
TCGAGGGGAACTTACTGAAGAAACGTTCTTCAAAGAGCAAATTAGGATTCATCGACGACACAATTACTCATCCATCTGGAGATCTCCTTCTTGCTTGGATACGAAATAAT
CATGTGATTATTGCTTGGATACTTAACTCTGTGTCCAAAGAACTTTATGCCAGTATTCTGTTCTCTGAATCTACTTGGGATATATGGTTAGATCTCAAAGAACGCTTCCA
AAAGAGCAATGGTCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATACGACTCGCTCTGTAAAGGTTACAGACGACTCGATCCAAGTTGTTCGTGTGGAGACATGCGAGTGGGGGGGAGTGGGAGGTGTTGTGACGTGGGGAGTTACCCC
ACGTCACCCTTCTTCTTCTCCAAGTGTTGGAGAAGGTGAAGAAGAGGAGTGCTACCACAAGCGCGATCCCGAGACCCAAGAGGATAGCGAGGAAGATCCAGTGGTGGTGT
TCGAGGGGAACTTACTGAAGAAACGTTCTTCAAAGAGCAAATTAGGATTCATCGACGACACAATTACTCATCCATCTGGAGATCTCCTTCTTGCTTGGATACGAAATAAT
CATGTGATTATTGCTTGGATACTTAACTCTGTGTCCAAAGAACTTTATGCCAGTATTCTGTTCTCTGAATCTACTTGGGATATATGGTTAGATCTCAAAGAACGCTTCCA
AAAGAGCAATGGTCCCTGA
Protein sequenceShow/hide protein sequence
MDTTRSVKVTDDSIQVVRVETCEWGGVGGVVTWGVTPRHPSSSPSVGEGEEEECYHKRDPETQEDSEEDPVVVFEGNLLKKRSSKSKLGFIDDTITHPSGDLLLAWIRNN
HVIIAWILNSVSKELYASILFSESTWDIWLDLKERFQKSNGP