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Moc07g11800 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g11800
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr7:9051524..9052080
RNA-Seq ExpressionMoc07g11800
SyntenyMoc07g11800
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022153526.1 uncharacterized protein LOC111021009 [Momordica charantia]3.6e-2856.31Show/hide
Query:  TMGQFGGLTNKDPYSHIKYLIEIANAFQLPGVSEDALRLKMFPFSLRDDARIWLNALEPNSINTWAELKEKFLAKYHTLTRNTDLREDIVSFRLKDNEAI
        T+GQF GL ++DP+SH+K   ++AN+F+LPG+S+DALRLK+FPFSL   A  WLNA  P+SIN+W  + +KFLAKY   T+N D+RE+I+SFR ++NE +
Subjt:  TMGQFGGLTNKDPYSHIKYLIEIANAFQLPGVSEDALRLKMFPFSLRDDARIWLNALEPNSINTWAELKEKFLAKYHTLTRNTDLREDIVSFRLKDNEAI

Query:  QEA
         EA
Subjt:  QEA

XP_022158836.1 uncharacterized protein LOC111025302 [Momordica charantia]6.0e-5564.89Show/hide
Query:  MNRNPQDPPHPQNPPVN---RAEEVPNLLLLSEEVPNSILLADNEDVAMRNY---------------------------------TMGQFGGLTNKDPYS
        MNRN QDPP PQNPPVN     EE  N +    E+PN ILLADN DVAMRNY                                 TMGQFGGLTN+DPYS
Subjt:  MNRNPQDPPHPQNPPVN---RAEEVPNLLLLSEEVPNSILLADNEDVAMRNY---------------------------------TMGQFGGLTNKDPYS

Query:  HIKYLIEIANAFQLPGVSEDALRLKMFPFSLRDDARIWLNALEPNSINTWAELKEKFLAKYHTLTRNTDLREDIVSFRLKDNEAIQEA
        H+K  IEIANAFQLPG SEDALRLKMFPFSLRD AR W+NALEPNSINTWAEL +KFLAKYHTLT+N DLREDIVSFR K+NEA+QEA
Subjt:  HIKYLIEIANAFQLPGVSEDALRLKMFPFSLRDDARIWLNALEPNSINTWAELKEKFLAKYHTLTRNTDLREDIVSFRLKDNEAIQEA

XP_022159127.1 uncharacterized protein LOC111025557 [Momordica charantia]1.5e-3776.47Show/hide
Query:  MGQFGGLTNKDPYSHIKYLIEIANAFQLPGVSEDALRLKMFPFSLRDDARIWLNALEPNSINTWAELKEKFLAKYHTLTRNTDLREDIVSFRLKDNEAIQ
        M QFGG TN+DPYSH+K  I+IANAFQLPGVSEDALRLKMFPFSLRD A  W+N LE N I TWAEL +KFLAKYHTLTRN DL+EDIVSFR +++EA+Q
Subjt:  MGQFGGLTNKDPYSHIKYLIEIANAFQLPGVSEDALRLKMFPFSLRDDARIWLNALEPNSINTWAELKEKFLAKYHTLTRNTDLREDIVSFRLKDNEAIQ

Query:  EA
        EA
Subjt:  EA

XP_022159235.1 uncharacterized protein LOC111025653 [Momordica charantia]4.0e-2743.51Show/hide
Query:  VPNSILLADNEDVAMRNY---------------------------------TMGQFGGLTNKDPYSHIKYLIEIANAFQLPGVSEDALRLKMFPFSLRDD
        VPN I +AD  D AMR+Y                                  +GQFGGL ++DP SH+K  I++AN F+LPG+S+DALRL +FPFS+   
Subjt:  VPNSILLADNEDVAMRNY---------------------------------TMGQFGGLTNKDPYSHIKYLIEIANAFQLPGVSEDALRLKMFPFSLRDD

Query:  ARIWLNALEPNSINTWAELKEKFLAKYHTLTRNTDLREDIVSFRLKDNEAIQEA
        A  WLNA   ++I TW+++ +KFL KY   TRN D+RE+I+SFR K+NEA+  A
Subjt:  ARIWLNALEPNSINTWAELKEKFLAKYHTLTRNTDLREDIVSFRLKDNEAIQEA

XP_024032803.1 uncharacterized protein LOC112095314 [Morus notabilis]2.0e-2654.37Show/hide
Query:  TMGQFGGLTNKDPYSHIKYLIEIANAFQLPGVSEDALRLKMFPFSLRDDARIWLNALEPNSINTWAELKEKFLAKYHTLTRNTDLREDIVSFRLKDNEAI
        T+GQF G+  +DP+ H++  +E+++AF+LPGV+ED LRLK+FP+SLRD AR+WLN+L P+S+ +W EL EKFL KY   T+N  LR DI SF+  D E++
Subjt:  TMGQFGGLTNKDPYSHIKYLIEIANAFQLPGVSEDALRLKMFPFSLRDDARIWLNALEPNSINTWAELKEKFLAKYHTLTRNTDLREDIVSFRLKDNEAI

Query:  QEA
         EA
Subjt:  QEA

TrEMBL top hitse value%identityAlignment
A0A6J1CXK1 uncharacterized protein LOC1110151933.7e-2655.14Show/hide
Query:  MRNYTMGQFGGLTNKDPYSHIKYLIEIANAFQLPGVSEDALRLKMFPFSLRDDARIWLNALEPNSINTWAELKEKFLAKYHTLTRNTDLREDIVSFRLKD
        MRN T+GQF    ++DP+SH+K  I++AN F+LPG+S+DALRLK+FPFSL   A  WLNA  P+S N W  + +KFL KY   T+N D+RE+I+SFR + 
Subjt:  MRNYTMGQFGGLTNKDPYSHIKYLIEIANAFQLPGVSEDALRLKMFPFSLRDDARIWLNALEPNSINTWAELKEKFLAKYHTLTRNTDLREDIVSFRLKD

Query:  NEAIQEA
        NEA+ EA
Subjt:  NEAIQEA

A0A6J1DKX0 uncharacterized protein LOC1110210091.8e-2856.31Show/hide
Query:  TMGQFGGLTNKDPYSHIKYLIEIANAFQLPGVSEDALRLKMFPFSLRDDARIWLNALEPNSINTWAELKEKFLAKYHTLTRNTDLREDIVSFRLKDNEAI
        T+GQF GL ++DP+SH+K   ++AN+F+LPG+S+DALRLK+FPFSL   A  WLNA  P+SIN+W  + +KFLAKY   T+N D+RE+I+SFR ++NE +
Subjt:  TMGQFGGLTNKDPYSHIKYLIEIANAFQLPGVSEDALRLKMFPFSLRDDARIWLNALEPNSINTWAELKEKFLAKYHTLTRNTDLREDIVSFRLKDNEAI

Query:  QEA
         EA
Subjt:  QEA

A0A6J1DY39 uncharacterized protein LOC1110256531.9e-2743.51Show/hide
Query:  VPNSILLADNEDVAMRNY---------------------------------TMGQFGGLTNKDPYSHIKYLIEIANAFQLPGVSEDALRLKMFPFSLRDD
        VPN I +AD  D AMR+Y                                  +GQFGGL ++DP SH+K  I++AN F+LPG+S+DALRL +FPFS+   
Subjt:  VPNSILLADNEDVAMRNY---------------------------------TMGQFGGLTNKDPYSHIKYLIEIANAFQLPGVSEDALRLKMFPFSLRDD

Query:  ARIWLNALEPNSINTWAELKEKFLAKYHTLTRNTDLREDIVSFRLKDNEAIQEA
        A  WLNA   ++I TW+++ +KFL KY   TRN D+RE+I+SFR K+NEA+  A
Subjt:  ARIWLNALEPNSINTWAELKEKFLAKYHTLTRNTDLREDIVSFRLKDNEAIQEA

A0A6J1DYY9 uncharacterized protein LOC1110255575.5e-3877.45Show/hide
Query:  MGQFGGLTNKDPYSHIKYLIEIANAFQLPGVSEDALRLKMFPFSLRDDARIWLNALEPNSINTWAELKEKFLAKYHTLTRNTDLREDIVSFRLKDNEAIQ
        M QFGG TN+DPYSH+K  I+IANAFQLPGVSEDALRLKMFPFSLRD A  WLN LE N I TWAEL +KFLAKYHTLTRN DL+EDIVSFR +++EA+Q
Subjt:  MGQFGGLTNKDPYSHIKYLIEIANAFQLPGVSEDALRLKMFPFSLRDDARIWLNALEPNSINTWAELKEKFLAKYHTLTRNTDLREDIVSFRLKDNEAIQ

Query:  EA
        EA
Subjt:  EA

A0A6J1E251 uncharacterized protein LOC1110253022.9e-5564.89Show/hide
Query:  MNRNPQDPPHPQNPPVN---RAEEVPNLLLLSEEVPNSILLADNEDVAMRNY---------------------------------TMGQFGGLTNKDPYS
        MNRN QDPP PQNPPVN     EE  N +    E+PN ILLADN DVAMRNY                                 TMGQFGGLTN+DPYS
Subjt:  MNRNPQDPPHPQNPPVN---RAEEVPNLLLLSEEVPNSILLADNEDVAMRNY---------------------------------TMGQFGGLTNKDPYS

Query:  HIKYLIEIANAFQLPGVSEDALRLKMFPFSLRDDARIWLNALEPNSINTWAELKEKFLAKYHTLTRNTDLREDIVSFRLKDNEAIQEA
        H+K  IEIANAFQLPG SEDALRLKMFPFSLRD AR W+NALEPNSINTWAEL +KFLAKYHTLT+N DLREDIVSFR K+NEA+QEA
Subjt:  HIKYLIEIANAFQLPGVSEDALRLKMFPFSLRDDARIWLNALEPNSINTWAELKEKFLAKYHTLTRNTDLREDIVSFRLKDNEAIQEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAGAAATCCACAAGACCCTCCACATCCACAAAATCCACCTGTGAACCGAGCAGAAGAAGTGCCTAATCTGCTCCTTCTATCAGAAGAAGTGCCTAATTCG
ATCCTTCTAGCAGATAACGAAGATGTAGCCATGCGGAACTATACGATGGGCCAGTTCGGAGGATTGACTAACAAAGATCCTTACTCCCATATCAAATATTTGATT
GAAATAGCTAATGCATTTCAACTTCCTGGTGTCTCTGAGGATGCACTAAGATTAAAAATGTTTCCTTTTTCTCTCAGGGACGATGCAAGGATTTGGCTAAACGCG
CTAGAACCAAATTCTATCAACACGTGGGCGGAATTGAAGGAGAAATTTTTGGCAAAGTACCACACGTTGACAAGGAACACAGACCTTCGAGAGGACATTGTGTCT
TTTAGACTGAAGGATAATGAAGCAATACAAGAAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATAGAAATCCACAAGACCCTCCACATCCACAAAATCCACCTGTGAACCGAGCAGAAGAAGTGCCTAATCTGCTCCTTCTATCAGAAGAAGTGCCTAATTCG
ATCCTTCTAGCAGATAACGAAGATGTAGCCATGCGGAACTATACGATGGGCCAGTTCGGAGGATTGACTAACAAAGATCCTTACTCCCATATCAAATATTTGATT
GAAATAGCTAATGCATTTCAACTTCCTGGTGTCTCTGAGGATGCACTAAGATTAAAAATGTTTCCTTTTTCTCTCAGGGACGATGCAAGGATTTGGCTAAACGCG
CTAGAACCAAATTCTATCAACACGTGGGCGGAATTGAAGGAGAAATTTTTGGCAAAGTACCACACGTTGACAAGGAACACAGACCTTCGAGAGGACATTGTGTCT
TTTAGACTGAAGGATAATGAAGCAATACAAGAAGCTTGA
Protein sequenceShow/hide protein sequence
MNRNPQDPPHPQNPPVNRAEEVPNLLLLSEEVPNSILLADNEDVAMRNYTMGQFGGLTNKDPYSHIKYLIEIANAFQLPGVSEDALRLKMFPFSLRDDARIWLNA
LEPNSINTWAELKEKFLAKYHTLTRNTDLREDIVSFRLKDNEAIQEA