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Moc07g13560 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g13560
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr7:10190061..10195058
RNA-Seq ExpressionMoc07g13560
SyntenyMoc07g13560
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154103.1 uncharacterized protein LOC111021439 [Momordica charantia]2.1e-2364.65Show/hide
Query:  IRDQLGQFLKYEIRQILRVQNVNADALARLAAAYETDLEIIMTVEILPDPSIKVQEAMDIDEQEQPRENWMSPLIRYLRDETMPNERVEFQQLQRWTTR
        +R+QL QF KYEIRQI R QNVNADALARLA  YETDL   + VEIL  PSI+ QEAMDID+Q QP ENW S LI+YL+D  +P E++E QQLQ+   R
Subjt:  IRDQLGQFLKYEIRQILRVQNVNADALARLAAAYETDLEIIMTVEILPDPSIKVQEAMDIDEQEQPRENWMSPLIRYLRDETMPNERVEFQQLQRWTTR

XP_022155342.1 uncharacterized protein LOC111022476 [Momordica charantia]6.2e-1566.67Show/hide
Query:  ARLAAAYETDLEIIMTVEILPDPSIKVQEAMDIDEQEQPRENWMSPLIRYLRDETMPNERVEFQQLQRWTTR
        ARLAAAYETDL   + VEILP+PSI+  EAMDIDEQ QP +NW S LI+YLRD  +P E++E QQLQR  TR
Subjt:  ARLAAAYETDLEIIMTVEILPDPSIKVQEAMDIDEQEQPRENWMSPLIRYLRDETMPNERVEFQQLQRWTTR

XP_022156571.1 uncharacterized protein LOC111023448 [Momordica charantia]2.1e-2364.65Show/hide
Query:  IRDQLGQFLKYEIRQILRVQNVNADALARLAAAYETDLEIIMTVEILPDPSIKVQEAMDIDEQEQPRENWMSPLIRYLRDETMPNERVEFQQLQRWTTR
        +R+QL QF KYEI QI R QNV+ADALARLAA YETDL   + VEILP+PSI+ QEAMDID Q Q  EN  SPLI+YL+D  +P E++E QQLQR   R
Subjt:  IRDQLGQFLKYEIRQILRVQNVNADALARLAAAYETDLEIIMTVEILPDPSIKVQEAMDIDEQEQPRENWMSPLIRYLRDETMPNERVEFQQLQRWTTR

XP_022158579.1 uncharacterized protein LOC111025033 [Momordica charantia]2.3e-2566.67Show/hide
Query:  IRDQLGQFLKYEIRQILRVQNVNADALARLAAAYETDLEIIMTVEILPDPSIKVQEAMDIDEQEQPRENWMSPLIRYLRDETMPNERVEFQQLQRWTTR
        +R+QL QF KYEIRQI   QNVNAD LARLA AYETDL   + VEILP PSI+ QEAMDID Q QP ENW SPLI+YL+D  +P E++E QQLQR   R
Subjt:  IRDQLGQFLKYEIRQILRVQNVNADALARLAAAYETDLEIIMTVEILPDPSIKVQEAMDIDEQEQPRENWMSPLIRYLRDETMPNERVEFQQLQRWTTR

XP_022159204.1 uncharacterized protein LOC111025623 [Momordica charantia]2.5e-2466.67Show/hide
Query:  IRDQLGQFLKYEIRQILRVQNVNADALARLAAAYETDLEIIMTVEILPDPSIKVQEAMDIDEQEQPRENWMSPLIRYLRDETMPNERVEFQQLQRWTTR
        ++DQLGQF K+EIRQI   QNVNADALARLAAAY TDL   ++VEIL +PSIK QE MDIDEQ Q  ENWMS LI+YL+D  +P+E +E QQLQR   R
Subjt:  IRDQLGQFLKYEIRQILRVQNVNADALARLAAAYETDLEIIMTVEILPDPSIKVQEAMDIDEQEQPRENWMSPLIRYLRDETMPNERVEFQQLQRWTTR

TrEMBL top hitse value%identityAlignment
A0A6J1DJC7 Ribonuclease H1.0e-2364.65Show/hide
Query:  IRDQLGQFLKYEIRQILRVQNVNADALARLAAAYETDLEIIMTVEILPDPSIKVQEAMDIDEQEQPRENWMSPLIRYLRDETMPNERVEFQQLQRWTTR
        +R+QL QF KYEIRQI R QNVNADALARLA  YETDL   + VEIL  PSI+ QEAMDID+Q QP ENW S LI+YL+D  +P E++E QQLQ+   R
Subjt:  IRDQLGQFLKYEIRQILRVQNVNADALARLAAAYETDLEIIMTVEILPDPSIKVQEAMDIDEQEQPRENWMSPLIRYLRDETMPNERVEFQQLQRWTTR

A0A6J1DP30 uncharacterized protein LOC1110224763.0e-1566.67Show/hide
Query:  ARLAAAYETDLEIIMTVEILPDPSIKVQEAMDIDEQEQPRENWMSPLIRYLRDETMPNERVEFQQLQRWTTR
        ARLAAAYETDL   + VEILP+PSI+  EAMDIDEQ QP +NW S LI+YLRD  +P E++E QQLQR  TR
Subjt:  ARLAAAYETDLEIIMTVEILPDPSIKVQEAMDIDEQEQPRENWMSPLIRYLRDETMPNERVEFQQLQRWTTR

A0A6J1DVC6 Ribonuclease H2.3e-2364.65Show/hide
Query:  IRDQLGQFLKYEIRQILRVQNVNADALARLAAAYETDLEIIMTVEILPDPSIKVQEAMDIDEQEQPRENWMSPLIRYLRDETMPNERVEFQQLQRWTTR
        +R+QL QF KYEI QI R QNV+ADALARLAA YETDL   + VEILP+PSI+ QEAMDID Q Q  EN  SPLI+YL+D  +P E++E QQLQR   R
Subjt:  IRDQLGQFLKYEIRQILRVQNVNADALARLAAAYETDLEIIMTVEILPDPSIKVQEAMDIDEQEQPRENWMSPLIRYLRDETMPNERVEFQQLQRWTTR

A0A6J1DZU0 Ribonuclease H1.1e-2566.67Show/hide
Query:  IRDQLGQFLKYEIRQILRVQNVNADALARLAAAYETDLEIIMTVEILPDPSIKVQEAMDIDEQEQPRENWMSPLIRYLRDETMPNERVEFQQLQRWTTR
        +R+QL QF KYEIRQI   QNVNAD LARLA AYETDL   + VEILP PSI+ QEAMDID Q QP ENW SPLI+YL+D  +P E++E QQLQR   R
Subjt:  IRDQLGQFLKYEIRQILRVQNVNADALARLAAAYETDLEIIMTVEILPDPSIKVQEAMDIDEQEQPRENWMSPLIRYLRDETMPNERVEFQQLQRWTTR

A0A6J1E1Q5 uncharacterized protein LOC1110256231.2e-2466.67Show/hide
Query:  IRDQLGQFLKYEIRQILRVQNVNADALARLAAAYETDLEIIMTVEILPDPSIKVQEAMDIDEQEQPRENWMSPLIRYLRDETMPNERVEFQQLQRWTTR
        ++DQLGQF K+EIRQI   QNVNADALARLAAAY TDL   ++VEIL +PSIK QE MDIDEQ Q  ENWMS LI+YL+D  +P+E +E QQLQR   R
Subjt:  IRDQLGQFLKYEIRQILRVQNVNADALARLAAAYETDLEIIMTVEILPDPSIKVQEAMDIDEQEQPRENWMSPLIRYLRDETMPNERVEFQQLQRWTTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTGGGTCACCTAGATCTAGCTTGCCAAGGTGTGGGTAGCCTAAATCGAGCTTCGAACGAGCGTGGGTCGCCGCCAAACATCCAAAACACCGCTGTAACG
TTCAATCTCTGCCGCTGTTCCGCTGCTGTACGCCGTTCGCCGTGCGCCGCCGCGAGGAGGGGTCGCACTGCCGCTGGAGCACCGGGAGTCGCCGGTCGCCGCGGT
TCGAACGCTGCCATGGGAAGATTGCGCCGCTGCTGCTCAACCCGCGCGCAGAACCGCCGCCGTCGCACCACGCCGGAGGAGGGAGCCTCGCGCCGCCGCTCGGAA
CCACCGGATCTGCTGCTTCACGCCGTCGATCGCCGCCTCTCGCCGCTCGTGGATCTGCCGCCGCCGAGTGCCGCTATAAGAGACCAGCTCGGCCAATTCTTAAAA
TATGAGATCAGGCAAATTCTCCGTGTCCAAAACGTCAATGCGGATGCGTTAGCCCGACTAGCTGCAGCCTACGAGACCGACCTGGAAATAATCATGACGGTGGAG
ATTTTGCCCGACCCGAGCATAAAGGTTCAGGAGGCAATGGATATCGACGAACAAGAGCAACCCAGAGAGAACTGGATGAGCCCTTTGATCAGATATTTAAGAGAT
GAGACCATGCCTAATGAAAGGGTAGAGTTCCAGCAACTCCAACGATGGACAACTAGGCTAGCTAATGCACACGAGGAGACAAAGATTTCTGAGGCAAAAATTCTT
TACAATGTTAATTTAATGAGTCAAGAAGAGAATGGAGCAAAGATGGCACGGGAAAAGTTGTCTATTTTGAGAGATGGCACGGAGGACAAAAAAAGTGTGCAGATT
GGTGAACAGGATCTAGGAGTGACCATCGTAGATTCTAAGTCCGATCTAAGAGTGATTCATCTTCTAACCTTACTCTTGGTTGGAATCATTCGGATGGAGTACCCA
CAAGTACCGCAAGATCCTAACATGGTGATTCTTCAAGCAATTCAAGGAATGATGGAAATGATGATGGAAGATAGACAAGAAAGGAGAGCGCAACAACAAAGAGAA
GAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGTGGGTCACCTAGATCTAGCTTGCCAAGGTGTGGGTAGCCTAAATCGAGCTTCGAACGAGCGTGGGTCGCCGCCAAACATCCAAAACACCGCTGTAACG
TTCAATCTCTGCCGCTGTTCCGCTGCTGTACGCCGTTCGCCGTGCGCCGCCGCGAGGAGGGGTCGCACTGCCGCTGGAGCACCGGGAGTCGCCGGTCGCCGCGGT
TCGAACGCTGCCATGGGAAGATTGCGCCGCTGCTGCTCAACCCGCGCGCAGAACCGCCGCCGTCGCACCACGCCGGAGGAGGGAGCCTCGCGCCGCCGCTCGGAA
CCACCGGATCTGCTGCTTCACGCCGTCGATCGCCGCCTCTCGCCGCTCGTGGATCTGCCGCCGCCGAGTGCCGCTATAAGAGACCAGCTCGGCCAATTCTTAAAA
TATGAGATCAGGCAAATTCTCCGTGTCCAAAACGTCAATGCGGATGCGTTAGCCCGACTAGCTGCAGCCTACGAGACCGACCTGGAAATAATCATGACGGTGGAG
ATTTTGCCCGACCCGAGCATAAAGGTTCAGGAGGCAATGGATATCGACGAACAAGAGCAACCCAGAGAGAACTGGATGAGCCCTTTGATCAGATATTTAAGAGAT
GAGACCATGCCTAATGAAAGGGTAGAGTTCCAGCAACTCCAACGATGGACAACTAGGCTAGCTAATGCACACGAGGAGACAAAGATTTCTGAGGCAAAAATTCTT
TACAATGTTAATTTAATGAGTCAAGAAGAGAATGGAGCAAAGATGGCACGGGAAAAGTTGTCTATTTTGAGAGATGGCACGGAGGACAAAAAAAGTGTGCAGATT
GGTGAACAGGATCTAGGAGTGACCATCGTAGATTCTAAGTCCGATCTAAGAGTGATTCATCTTCTAACCTTACTCTTGGTTGGAATCATTCGGATGGAGTACCCA
CAAGTACCGCAAGATCCTAACATGGTGATTCTTCAAGCAATTCAAGGAATGATGGAAATGATGATGGAAGATAGACAAGAAAGGAGAGCGCAACAACAAAGAGAA
GAATGA
Protein sequenceShow/hide protein sequence
MDVGHLDLACQGVGSLNRASNERGSPPNIQNTAVTFNLCRCSAAVRRSPCAAARRGRTAAGAPGVAGRRGSNAAMGRLRRCCSTRAQNRRRRTTPEEGASRRRSE
PPDLLLHAVDRRLSPLVDLPPPSAAIRDQLGQFLKYEIRQILRVQNVNADALARLAAAYETDLEIIMTVEILPDPSIKVQEAMDIDEQEQPRENWMSPLIRYLRD
ETMPNERVEFQQLQRWTTRLANAHEETKISEAKILYNVNLMSQEENGAKMAREKLSILRDGTEDKKSVQIGEQDLGVTIVDSKSDLRVIHLLTLLLVGIIRMEYP
QVPQDPNMVILQAIQGMMEMMMEDRQERRAQQQREE