; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc07g17190 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g17190
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr7:12334557..12338182
RNA-Seq ExpressionMoc07g17190
SyntenyMoc07g17190
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004672 - protein kinase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8682180.1 Transcription initiation factor IIA subunit 2 [Hibiscus syriacus]1.1e-1140.83Show/hide
Query:  DWEEMDLRL------QVQYEQSILMYETDTLNFADASSKLLSEERRQKSEGRTSNEDSALVASNWKKKKDSVQKKACCWGCRQFGHMKKDCPN-RAGSSK
        D E+  LRL        ++ Q++LMY  + +NF++ +SKL+SEERR K+    S+E  AL     +KK    +KK  CWGC Q GH+KKDC N  A S+ 
Subjt:  DWEEMDLRL------QVQYEQSILMYETDTLNFADASSKLLSEERRQKSEGRTSNEDSALVASNWKKKKDSVQKKACCWGCRQFGHMKKDCPN-RAGSSK

Query:  GFGPDADSVSLISGDDDQFL
        G   DA +V +   +DD+F+
Subjt:  GFGPDADSVSLISGDDDQFL

KAE8717380.1 hypothetical protein F3Y22_tig00110050pilonHSYRG00143 [Hibiscus syriacus]1.1e-1140.83Show/hide
Query:  DWEEMDLRL------QVQYEQSILMYETDTLNFADASSKLLSEERRQKSEGRTSNEDSALVASNWKKKKDSVQKKACCWGCRQFGHMKKDCPN-RAGSSK
        D E+  LRL        ++ Q++LMY  + +NF++ +SKL+SEERR K+    S+E  AL     +KK    +KK  CWGC Q GH+KKDC N  A S+ 
Subjt:  DWEEMDLRL------QVQYEQSILMYETDTLNFADASSKLLSEERRQKSEGRTSNEDSALVASNWKKKKDSVQKKACCWGCRQFGHMKKDCPN-RAGSSK

Query:  GFGPDADSVSLISGDDDQFL
        G   DA +V +   +DD+F+
Subjt:  GFGPDADSVSLISGDDDQFL

KAF3659902.1 hypothetical protein FXO37_13760 [Capsicum annuum]7.9e-1343.75Show/hide
Query:  KNSNMSDEDWEEMDLRLQVQ------------YEQSILMYETDTLNFADASSKLLSEERRQKSEGRTSNEDSALVASNWKKKKDSVQKKACCWGCRQFGH
        + S +SDE+WEE+D++   Q            + Q ILMYE +T+ F++ +SKL+SEE+R K+    S EDSALV     K K S +KK  CW C+Q GH
Subjt:  KNSNMSDEDWEEMDLRLQVQ------------YEQSILMYETDTLNFADASSKLLSEERRQKSEGRTSNEDSALVASNWKKKKDSVQKKACCWGCRQFGH

Query:  MKKDCPNRAGSS
        +K +CPN   SS
Subjt:  MKKDCPNRAGSS

PHU14392.1 hypothetical protein BC332_15597 [Capsicum chinense]8.8e-1240.46Show/hide
Query:  KNSNMSDEDWEEMDLRLQVQ------------YEQSILMYETDTLNFADASSKLLSEERRQKSEGRTSNEDSALVASNWKKKKDSVQKKACCWGCRQFGH
        + S +SDE+WEE+D++   Q            + Q ILMYE +T+ F++ +SKL+SEE+R K+    S EDS LV     K K S +KK  CW C+Q G+
Subjt:  KNSNMSDEDWEEMDLRLQVQ------------YEQSILMYETDTLNFADASSKLLSEERRQKSEGRTSNEDSALVASNWKKKKDSVQKKACCWGCRQFGH

Query:  MKKDCPNRAGSSKGFGPD--ADSVSLISGDD
        +K +CPN   SS     +  A+ VSL   DD
Subjt:  MKKDCPNRAGSSKGFGPD--ADSVSLISGDD

XP_022139673.1 uncharacterized protein LOC111010521 [Momordica charantia]2.4e-2572.63Show/hide
Query:  MSDEDWE-EMDLRLQVQYE--QSILMYETDTLNFADASSKLLSEERRQKSEGRTSNEDSALVASNWKKKKDSVQKKACCWGCRQFGHMKKDCPNR
        + DED    + L L   YE  + ILMY  DTLNFA+ +SKLLSEERR KSEGRTS+EDSALV SNWKKKKDSVQKKACCWGC Q GHMKKDCPNR
Subjt:  MSDEDWE-EMDLRLQVQYE--QSILMYETDTLNFADASSKLLSEERRQKSEGRTSNEDSALVASNWKKKKDSVQKKACCWGCRQFGHMKKDCPNR

TrEMBL top hitse value%identityAlignment
A0A2G3C6T2 CCHC-type domain-containing protein4.2e-1240.46Show/hide
Query:  KNSNMSDEDWEEMDLRLQVQ------------YEQSILMYETDTLNFADASSKLLSEERRQKSEGRTSNEDSALVASNWKKKKDSVQKKACCWGCRQFGH
        + S +SDE+WEE+D++   Q            + Q ILMYE +T+ F++ +SKL+SEE+R K+    S EDS LV     K K S +KK  CW C+Q G+
Subjt:  KNSNMSDEDWEEMDLRLQVQ------------YEQSILMYETDTLNFADASSKLLSEERRQKSEGRTSNEDSALVASNWKKKKDSVQKKACCWGCRQFGH

Query:  MKKDCPNRAGSSKGFGPD--ADSVSLISGDD
        +K +CPN   SS     +  A+ VSL   DD
Subjt:  MKKDCPNRAGSSKGFGPD--ADSVSLISGDD

A0A6A2YS90 Transcription initiation factor IIA subunit 25.5e-1240.83Show/hide
Query:  DWEEMDLRL------QVQYEQSILMYETDTLNFADASSKLLSEERRQKSEGRTSNEDSALVASNWKKKKDSVQKKACCWGCRQFGHMKKDCPN-RAGSSK
        D E+  LRL        ++ Q++LMY  + +NF++ +SKL+SEERR K+    S+E  AL     +KK    +KK  CWGC Q GH+KKDC N  A S+ 
Subjt:  DWEEMDLRL------QVQYEQSILMYETDTLNFADASSKLLSEERRQKSEGRTSNEDSALVASNWKKKKDSVQKKACCWGCRQFGHMKKDCPN-RAGSSK

Query:  GFGPDADSVSLISGDDDQFL
        G   DA +V +   +DD+F+
Subjt:  GFGPDADSVSLISGDDDQFL

A0A6A3BK59 CCHC-type domain-containing protein5.5e-1240.83Show/hide
Query:  DWEEMDLRL------QVQYEQSILMYETDTLNFADASSKLLSEERRQKSEGRTSNEDSALVASNWKKKKDSVQKKACCWGCRQFGHMKKDCPN-RAGSSK
        D E+  LRL        ++ Q++LMY  + +NF++ +SKL+SEERR K+    S+E  AL     +KK    +KK  CWGC Q GH+KKDC N  A S+ 
Subjt:  DWEEMDLRL------QVQYEQSILMYETDTLNFADASSKLLSEERRQKSEGRTSNEDSALVASNWKKKKDSVQKKACCWGCRQFGHMKKDCPN-RAGSSK

Query:  GFGPDADSVSLISGDDDQFL
        G   DA +V +   +DD+F+
Subjt:  GFGPDADSVSLISGDDDQFL

A0A6A3DA47 CCHC-type domain-containing protein9.4e-1240.5Show/hide
Query:  DWEEMDLRL------QVQYEQSILMYETDTLNFADASSKLLSEERRQKSEGRTSNEDSALVASNWKKKKDSVQKKACCWGCRQFGHMKKDCPN-RAGSSK
        D E+  LRL        ++ Q++LMY  + +NF++ +SKL+SEERR K+    S+E  AL     +KK    ++K  CWGC Q GH+KKDC N  A S+ 
Subjt:  DWEEMDLRL------QVQYEQSILMYETDTLNFADASSKLLSEERRQKSEGRTSNEDSALVASNWKKKKDSVQKKACCWGCRQFGHMKKDCPN-RAGSSK

Query:  GFGPDADSVSLISGDDDQFLL
        G   DA +V +   +DD+F L
Subjt:  GFGPDADSVSLISGDDDQFLL

A0A6J1CG82 uncharacterized protein LOC1110105211.1e-2572.63Show/hide
Query:  MSDEDWE-EMDLRLQVQYE--QSILMYETDTLNFADASSKLLSEERRQKSEGRTSNEDSALVASNWKKKKDSVQKKACCWGCRQFGHMKKDCPNR
        + DED    + L L   YE  + ILMY  DTLNFA+ +SKLLSEERR KSEGRTS+EDSALV SNWKKKKDSVQKKACCWGC Q GHMKKDCPNR
Subjt:  MSDEDWE-EMDLRLQVQYE--QSILMYETDTLNFADASSKLLSEERRQKSEGRTSNEDSALVASNWKKKKDSVQKKACCWGCRQFGHMKKDCPNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAAGTATGAGGGCCGAGGTGAACCTGGCCGAGGTCCGACCTACCGGGAAGCTCGGTGGGGGCCGATGCGAACTACTGTCCGCCCGAGTGTTCAGGTCGGTC
CGGAGGCCGAGTTCGAGCTACAATCGGAAACACACTGTTTGTGCATATCCTTGCATAAACACAGTCCAACCTCACTCTCCTGAATTTCAGACACTGTTCGTGCAA
TGTAGAAGTTCTAAAAATTCCAACATGAGTGATGAAGATTGGGAGGAAATGGATTTGAGGCTGCAAGTGCAATACGAACAGTCGATCTTGATGTATGAGACTGAT
ACTTTGAATTTTGCCGACGCTAGTAGTAAACTGTTGTCAGAGGAAAGAAGGCAGAAGAGTGAAGGTCGTACTTCAAATGAAGATTCGGCATTGGTAGCTAGCAAT
TGGAAGAAGAAGAAAGACTCTGTACAAAAGAAAGCTTGTTGCTGGGGATGCAGACAGTTTGGACACATGAAGAAAGATTGTCCCAACAGAGCCGGTTCGTCAAAA
GGCTTTGGACCGGATGCTGATAGTGTTTCTCTCATCAGTGGAGACGATGATCAGTTCCTTTTGAAGAGAGAGAGAATCATCCTCATGGTATGTTCGCTTTACCAT
GATAAAGGATGTGATGTTAGCGGCTCCACAAGTTTGTGCATGAGCATTGGCTTGGCGCAGTTATGCAAGGTGTGTGTGGTGGAAGTTATGTCGATGGCTGAAGAA
CTTCTAGCCACAAGGGCGTTTTCCGGCGGCGCTTCTTTGGATCAAACAGCAGCAGTGGCGGCGGCGCCCCTTCGGATTGAGCAGCGGTGCTGCGGCGCTTCTTCG
AACAGCAGCAGCGACGTCCCGATCCAGCGCCGACGCGGCCCCTCCTCGCAGTGGCACACGCGACGGGCCAGATCCGCGGCGGCGCACGGCGAACATGTGGTACAG
CGGCAAAAACGGCGGCAACTTGTTGCTACGATCCGACGAACAACAACTCCAGTGGCGGGATTTGAACGTTACAGCAGTGTTTTAGGACGTTTGGCGGTGACCCAC
ATCCGTTCGAAGCTCGATTTAGCTACCCACACCTTGGCGAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTAAGTATGAGGGCCGAGGTGAACCTGGCCGAGGTCCGACCTACCGGGAAGCTCGGTGGGGGCCGATGCGAACTACTGTCCGCCCGAGTGTTCAGGTCGGTC
CGGAGGCCGAGTTCGAGCTACAATCGGAAACACACTGTTTGTGCATATCCTTGCATAAACACAGTCCAACCTCACTCTCCTGAATTTCAGACACTGTTCGTGCAA
TGTAGAAGTTCTAAAAATTCCAACATGAGTGATGAAGATTGGGAGGAAATGGATTTGAGGCTGCAAGTGCAATACGAACAGTCGATCTTGATGTATGAGACTGAT
ACTTTGAATTTTGCCGACGCTAGTAGTAAACTGTTGTCAGAGGAAAGAAGGCAGAAGAGTGAAGGTCGTACTTCAAATGAAGATTCGGCATTGGTAGCTAGCAAT
TGGAAGAAGAAGAAAGACTCTGTACAAAAGAAAGCTTGTTGCTGGGGATGCAGACAGTTTGGACACATGAAGAAAGATTGTCCCAACAGAGCCGGTTCGTCAAAA
GGCTTTGGACCGGATGCTGATAGTGTTTCTCTCATCAGTGGAGACGATGATCAGTTCCTTTTGAAGAGAGAGAGAATCATCCTCATGGTATGTTCGCTTTACCAT
GATAAAGGATGTGATGTTAGCGGCTCCACAAGTTTGTGCATGAGCATTGGCTTGGCGCAGTTATGCAAGGTGTGTGTGGTGGAAGTTATGTCGATGGCTGAAGAA
CTTCTAGCCACAAGGGCGTTTTCCGGCGGCGCTTCTTTGGATCAAACAGCAGCAGTGGCGGCGGCGCCCCTTCGGATTGAGCAGCGGTGCTGCGGCGCTTCTTCG
AACAGCAGCAGCGACGTCCCGATCCAGCGCCGACGCGGCCCCTCCTCGCAGTGGCACACGCGACGGGCCAGATCCGCGGCGGCGCACGGCGAACATGTGGTACAG
CGGCAAAAACGGCGGCAACTTGTTGCTACGATCCGACGAACAACAACTCCAGTGGCGGGATTTGAACGTTACAGCAGTGTTTTAGGACGTTTGGCGGTGACCCAC
ATCCGTTCGAAGCTCGATTTAGCTACCCACACCTTGGCGAGCTAG
Protein sequenceShow/hide protein sequence
MLSMRAEVNLAEVRPTGKLGGGRCELLSARVFRSVRRPSSSYNRKHTVCAYPCINTVQPHSPEFQTLFVQCRSSKNSNMSDEDWEEMDLRLQVQYEQSILMYETD
TLNFADASSKLLSEERRQKSEGRTSNEDSALVASNWKKKKDSVQKKACCWGCRQFGHMKKDCPNRAGSSKGFGPDADSVSLISGDDDQFLLKRERIILMVCSLYH
DKGCDVSGSTSLCMSIGLAQLCKVCVVEVMSMAEELLATRAFSGGASLDQTAAVAAAPLRIEQRCCGASSNSSSDVPIQRRRGPSSQWHTRRARSAAAHGEHVVQ
RQKRRQLVATIRRTTTPVAGFERYSSVLGRLAVTHIRSKLDLATHTLAS