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Moc07g17210 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g17210
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr7:12359974..12360893
RNA-Seq ExpressionMoc07g17210
SyntenyMoc07g17210
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0043229 - intracellular organelle (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7561662.1 Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]1.4e-0751.47Show/hide
Query:  LELPLDKKSADVEEAKWKKLDRKVLGTMSLTLRKNVQSSVAKETTTMGLMNALPNIYEKPPVNNTVYL
        L  PL  K   + + +W  LDR+VLG + LTL KNV  +VAKE TT GLM  L ++YEKP  NN V+L
Subjt:  LELPLDKKSADVEEAKWKKLDRKVLGTMSLTLRKNVQSSVAKETTTMGLMNALPNIYEKPPVNNTVYL
KAG7584790.1 Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]1.4e-0751.47Show/hide
Query:  LELPLDKKSADVEEAKWKKLDRKVLGTMSLTLRKNVQSSVAKETTTMGLMNALPNIYEKPPVNNTVYL
        L  PL  K   + + +W  LDR+VLG + LTL KNV  +VAKE TT GLM  L ++YEKP  NN V+L
Subjt:  LELPLDKKSADVEEAKWKKLDRKVLGTMSLTLRKNVQSSVAKETTTMGLMNALPNIYEKPPVNNTVYL
KAG7593230.1 Pentatricopeptide repeat [Arabidopsis thaliana x Arabidopsis arenosa]1.4e-0751.47Show/hide
Query:  LELPLDKKSADVEEAKWKKLDRKVLGTMSLTLRKNVQSSVAKETTTMGLMNALPNIYEKPPVNNTVYL
        L  PL  K   + + +W  LDR+VLG + LTL KNV  +VAKE TT GLM  L ++YEKP  NN V+L
Subjt:  LELPLDKKSADVEEAKWKKLDRKVLGTMSLTLRKNVQSSVAKETTTMGLMNALPNIYEKPPVNNTVYL
VDD56318.1 unnamed protein product [Brassica oleracea]1.0e-0852.94Show/hide
Query:  LELPLDKKSADVEEAKWKKLDRKVLGTMSLTLRKNVQSSVAKETTTMGLMNALPNIYEKPPVNNTVYL
        L  PL KK   +++ +W+ LDR+VLG + LTL KNV  +VAKE TT GLM  L ++YEKP  NN V+L
Subjt:  LELPLDKKSADVEEAKWKKLDRKVLGTMSLTLRKNVQSSVAKETTTMGLMNALPNIYEKPPVNNTVYL
XP_022152845.1 uncharacterized protein LOC111020469 [Momordica charantia]7.1e-1573.53Show/hide
Query:  LELPLDKKSADVEEAKWKKLDRKVLGTMSLTLRKNVQSSVAKETTTMGLMNALPNIYEKPPVNNTVYL
        LE PL+ K  D+ E +WKKLDRKVLGT+ LTL KNVQSSVAK TTTMGLMNAL N+YEK  VNN VYL
Subjt:  LELPLDKKSADVEEAKWKKLDRKVLGTMSLTLRKNVQSSVAKETTTMGLMNALPNIYEKPPVNNTVYL
TrEMBL top hitse value%identityAlignment
A0A6J1DF43 uncharacterized protein LOC1110204693.5e-1573.53Show/hide
Query:  LELPLDKKSADVEEAKWKKLDRKVLGTMSLTLRKNVQSSVAKETTTMGLMNALPNIYEKPPVNNTVYL
        LE PL+ K  D+ E +WKKLDRKVLGT+ LTL KNVQSSVAK TTTMGLMNAL N+YEK  VNN VYL
Subjt:  LELPLDKKSADVEEAKWKKLDRKVLGTMSLTLRKNVQSSVAKETTTMGLMNALPNIYEKPPVNNTVYL
A0A803KVY3 Uncharacterized protein1.8e-1144.9Show/hide
Query:  KGDVKVQNDQASELGGSNSRLSTF---QVLELPLDKKSAD-VEEAKWKKLDRKVLGTMSLTLRKNVQSSVAKETTTMGLMNALPNIYEKPPVNNTVYL
        KG+VK++     + G    ++  +   + L  PL++K  D ++EAKWK LDR+ LG + LTL +NV  ++AKETTT GLM AL N+YEKP  +N V+L
Subjt:  KGDVKVQNDQASELGGSNSRLSTF---QVLELPLDKKSAD-VEEAKWKKLDRKVLGTMSLTLRKNVQSSVAKETTTMGLMNALPNIYEKPPVNNTVYL
A0A803L407 Uncharacterized protein5.2e-1143.88Show/hide
Query:  KGDVKVQNDQASELGGSNSRLSTF---QVLELPLDKKSAD-VEEAKWKKLDRKVLGTMSLTLRKNVQSSVAKETTTMGLMNALPNIYEKPPVNNTVYL
        KG+VK++     + G    ++  +   + L  PL++K  D ++EA+WK LDR+ LG + LTL +NV  ++AKETTT GLM AL N+YEKP  +N V+L
Subjt:  KGDVKVQNDQASELGGSNSRLSTF---QVLELPLDKKSAD-VEEAKWKKLDRKVLGTMSLTLRKNVQSSVAKETTTMGLMNALPNIYEKPPVNNTVYL
A0A803LW33 Uncharacterized protein5.2e-1143.88Show/hide
Query:  KGDVKVQNDQASELGGSNSRLSTF---QVLELPLDKKSAD-VEEAKWKKLDRKVLGTMSLTLRKNVQSSVAKETTTMGLMNALPNIYEKPPVNNTVYL
        KG+VK++     + G    ++  +   + L  PL++K  D ++EA+WK LDR+ LG + LTL +NV  ++AKETTT GLM AL N+YEKP  +N V+L
Subjt:  KGDVKVQNDQASELGGSNSRLSTF---QVLELPLDKKSAD-VEEAKWKKLDRKVLGTMSLTLRKNVQSSVAKETTTMGLMNALPNIYEKPPVNNTVYL
A0A803MP45 Uncharacterized protein5.2e-1143.88Show/hide
Query:  KGDVKVQNDQASELGGSNSRLSTF---QVLELPLDKKSAD-VEEAKWKKLDRKVLGTMSLTLRKNVQSSVAKETTTMGLMNALPNIYEKPPVNNTVYL
        KG+VK++     + G    ++  +   + L  PL++K  D ++EA+WK LDR+ LG + LTL +NV  ++AKETTT GLM AL N+YEKP  +N V+L
Subjt:  KGDVKVQNDQASELGGSNSRLSTF---QVLELPLDKKSAD-VEEAKWKKLDRKVLGTMSLTLRKNVQSSVAKETTTMGLMNALPNIYEKPPVNNTVYL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29785.1 unknown protein4.0e-0845.45Show/hide
Query:  LELPLDKKSADVEEAKWKKLDRKVLGTMSLTLRKNVQSSVAKETTTMGLMNALPNIYEKPPVNNTV
        L  PL KK   + +  W  L R+VL  + LT+ KN+  +VAKE +  GLM  L +IY+KP  NNTV
Subjt:  LELPLDKKSADVEEAKWKKLDRKVLGTMSLTLRKNVQSSVAKETTTMGLMNALPNIYEKPPVNNTV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCCACGGACTCCACGCGATCACATTCCAGCAGTTGGTTCAAATTCAATCCTCCGAAGCCTAAGGGTACGAGGTGCGATGCCAAAACCACTGACGAACTTA
AAATTCAAACCTTCAAGGCAAAAGGGCGATGTGAAAGTTCAAAATGATCAAGCCTCCGAACTTGGGGGATCAAATAGTAGATTATCCACATTCCAAGTATTGGAA
TTGCCATTAGACAAGAAGTCGGCCGACGTGGAAGAAGCCAAATGGAAAAAGTTGGACAGGAAGGTGTTGGGTACGATGAGCCTAACATTAAGAAAAAATGTGCAG
AGCAGCGTAGCTAAAGAGACTACCACAATGGGGCTGATGAATGCACTGCCCAACATATATGAAAAGCCCCCTGTGAATAATACGGTGTATCTCCGCAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCCACGGACTCCACGCGATCACATTCCAGCAGTTGGTTCAAATTCAATCCTCCGAAGCCTAAGGGTACGAGGTGCGATGCCAAAACCACTGACGAACTTA
AAATTCAAACCTTCAAGGCAAAAGGGCGATGTGAAAGTTCAAAATGATCAAGCCTCCGAACTTGGGGGATCAAATAGTAGATTATCCACATTCCAAGTATTGGAA
TTGCCATTAGACAAGAAGTCGGCCGACGTGGAAGAAGCCAAATGGAAAAAGTTGGACAGGAAGGTGTTGGGTACGATGAGCCTAACATTAAGAAAAAATGTGCAG
AGCAGCGTAGCTAAAGAGACTACCACAATGGGGCTGATGAATGCACTGCCCAACATATATGAAAAGCCCCCTGTGAATAATACGGTGTATCTCCGCAACTAA
Protein sequenceShow/hide protein sequence
MGPRTPRDHIPAVGSNSILRSLRVRGAMPKPLTNLKFKPSRQKGDVKVQNDQASELGGSNSRLSTFQVLELPLDKKSADVEEAKWKKLDRKVLGTMSLTLRKNVQ
SSVAKETTTMGLMNALPNIYEKPPVNNTVYLRN