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Moc07g17320 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g17320
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr7:12416081..12416932
RNA-Seq ExpressionMoc07g17320
SyntenyMoc07g17320
Gene Ontology termsGO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137317.1 uncharacterized protein LOC111008813 [Momordica charantia]6.6e-0741.3Show/hide
Query:  LKRELVSKLKGEL------------RKAGNVTEDD--EPPFVQDILDAPISQKSRLPTFDNYDGTKDLVDHVETYESIMDIHAYSDAIESRA
        + RE   +L+G+L            +K G + + D  E PF  D+L+API  K + PT   YDG+KD  D+VE +ES+MD  A SDAI+ RA
Subjt:  LKRELVSKLKGEL------------RKAGNVTEDD--EPPFVQDILDAPISQKSRLPTFDNYDGTKDLVDHVETYESIMDIHAYSDAIESRA

XP_022149836.1 uncharacterized protein LOC111018172 [Momordica charantia]1.5e-2274.07Show/hide
Query:  LKRELVSKLKGELRKAGNVTED---DEPPFVQDILDAPISQKSRLPTFDNYDGTKDLVDHVETYESIMDIHAYSDAIESRA
        L+RELVS+LKG L+K    TED   DEPPFVQDILDAPISQKS  PTF+ YDGTKD VDHVETYE IMD HAYSDA++ RA
Subjt:  LKRELVSKLKGELRKAGNVTED---DEPPFVQDILDAPISQKSRLPTFDNYDGTKDLVDHVETYESIMDIHAYSDAIESRA

XP_022156542.1 uncharacterized protein LOC111023421 [Momordica charantia]1.1e-0641.3Show/hide
Query:  LKRELVSKLKGEL------------RKAGNVTEDD--EPPFVQDILDAPISQKSRLPTFDNYDGTKDLVDHVETYESIMDIHAYSDAIESRA
        + RE   +L+GEL            +K  ++ + D  E PF  D+L+API  K + PT   YDGTKD  D+VE +E +MD  A SDAI+ RA
Subjt:  LKRELVSKLKGEL------------RKAGNVTEDD--EPPFVQDILDAPISQKSRLPTFDNYDGTKDLVDHVETYESIMDIHAYSDAIESRA

XP_022156638.1 uncharacterized protein LOC111023488 [Momordica charantia]8.7e-0756.14Show/hide
Query:  AIESRAPEDHEVDAKIAEDQVQGGQGLDQPQRSTRNANPTLPPAYSRSTKTNRGRGG
        A+       HE+DAK+ E+Q + GQ +D P+RSTRNAN  LPPA+ RS K NRGRGG
Subjt:  AIESRAPEDHEVDAKIAEDQVQGGQGLDQPQRSTRNANPTLPPAYSRSTKTNRGRGG

XP_022158652.1 uncharacterized protein LOC111025109 [Momordica charantia]2.3e-0742Show/hide
Query:  SSHNFLRLSVKAK-PELKREL---VSKLKGELRKAGNVTED---DEPPFVQDILDAPISQKSRLPTFDNYDGTKDLVDHVETYESIMDIHAYSDAIESRA
        SSHN   +  + +  +L+ EL   V  LK +  +  +   D    EPPF  D+L+API  K + PT   YDGTKD  D+VE +E +MD  A SDAI+ RA
Subjt:  SSHNFLRLSVKAK-PELKREL---VSKLKGELRKAGNVTED---DEPPFVQDILDAPISQKSRLPTFDNYDGTKDLVDHVETYESIMDIHAYSDAIESRA

TrEMBL top hitse value%identityAlignment
A0A6J1C7X5 uncharacterized protein LOC1110088133.2e-0741.3Show/hide
Query:  LKRELVSKLKGEL------------RKAGNVTEDD--EPPFVQDILDAPISQKSRLPTFDNYDGTKDLVDHVETYESIMDIHAYSDAIESRA
        + RE   +L+G+L            +K G + + D  E PF  D+L+API  K + PT   YDG+KD  D+VE +ES+MD  A SDAI+ RA
Subjt:  LKRELVSKLKGEL------------RKAGNVTEDD--EPPFVQDILDAPISQKSRLPTFDNYDGTKDLVDHVETYESIMDIHAYSDAIESRA

A0A6J1D9M1 uncharacterized protein LOC1110181727.1e-2374.07Show/hide
Query:  LKRELVSKLKGELRKAGNVTED---DEPPFVQDILDAPISQKSRLPTFDNYDGTKDLVDHVETYESIMDIHAYSDAIESRA
        L+RELVS+LKG L+K    TED   DEPPFVQDILDAPISQKS  PTF+ YDGTKD VDHVETYE IMD HAYSDA++ RA
Subjt:  LKRELVSKLKGELRKAGNVTED---DEPPFVQDILDAPISQKSRLPTFDNYDGTKDLVDHVETYESIMDIHAYSDAIESRA

A0A6J1DR60 uncharacterized protein LOC1110234884.2e-0756.14Show/hide
Query:  AIESRAPEDHEVDAKIAEDQVQGGQGLDQPQRSTRNANPTLPPAYSRSTKTNRGRGG
        A+       HE+DAK+ E+Q + GQ +D P+RSTRNAN  LPPA+ RS K NRGRGG
Subjt:  AIESRAPEDHEVDAKIAEDQVQGGQGLDQPQRSTRNANPTLPPAYSRSTKTNRGRGG

A0A6J1DS95 uncharacterized protein LOC1110234215.5e-0741.3Show/hide
Query:  LKRELVSKLKGEL------------RKAGNVTEDD--EPPFVQDILDAPISQKSRLPTFDNYDGTKDLVDHVETYESIMDIHAYSDAIESRA
        + RE   +L+GEL            +K  ++ + D  E PF  D+L+API  K + PT   YDGTKD  D+VE +E +MD  A SDAI+ RA
Subjt:  LKRELVSKLKGEL------------RKAGNVTEDD--EPPFVQDILDAPISQKSRLPTFDNYDGTKDLVDHVETYESIMDIHAYSDAIESRA

A0A6J1DXR9 uncharacterized protein LOC1110251091.1e-0742Show/hide
Query:  SSHNFLRLSVKAK-PELKREL---VSKLKGELRKAGNVTED---DEPPFVQDILDAPISQKSRLPTFDNYDGTKDLVDHVETYESIMDIHAYSDAIESRA
        SSHN   +  + +  +L+ EL   V  LK +  +  +   D    EPPF  D+L+API  K + PT   YDGTKD  D+VE +E +MD  A SDAI+ RA
Subjt:  SSHNFLRLSVKAK-PELKREL---VSKLKGELRKAGNVTED---DEPPFVQDILDAPISQKSRLPTFDNYDGTKDLVDHVETYESIMDIHAYSDAIESRA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTCTTCCCACAACTTTTTAAGGTTATCGGTCAAAGCCAAACCCGAGCTGAAGAGAGAGCTGGTAAGCAAGCTGAAAGGAGAGTTGAGGAAAGCCGGGAAC
GTCACAGAAGATGACGAGCCGCCTTTCGTTCAGGATATCCTGGATGCCCCAATTTCACAGAAGAGTAGGTTACCAACATTCGATAATTATGATGGGACAAAGGAT
CTGGTCGATCATGTCGAGACGTATGAGTCCATTATGGACATCCACGCGTATTCGGACGCGATAGAATCCCGAGCACCTGAAGATCACGAGGTCGATGCAAAGATT
GCTGAAGATCAGGTTCAGGGAGGTCAGGGGCTTGACCAGCCACAGAGGTCGACCCGTAACGCGAATCCAACTTTGCCTCCTGCTTATTCGAGGTCCACAAAGACC
AACCGAGGTCGAGGTGGAGCATTGAAGAAAACCTCACGTAGGACCGTGTCGGCGGCGGATCCTAATACTTTCTTCACCCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCTCTTCCCACAACTTTTTAAGGTTATCGGTCAAAGCCAAACCCGAGCTGAAGAGAGAGCTGGTAAGCAAGCTGAAAGGAGAGTTGAGGAAAGCCGGGAAC
GTCACAGAAGATGACGAGCCGCCTTTCGTTCAGGATATCCTGGATGCCCCAATTTCACAGAAGAGTAGGTTACCAACATTCGATAATTATGATGGGACAAAGGAT
CTGGTCGATCATGTCGAGACGTATGAGTCCATTATGGACATCCACGCGTATTCGGACGCGATAGAATCCCGAGCACCTGAAGATCACGAGGTCGATGCAAAGATT
GCTGAAGATCAGGTTCAGGGAGGTCAGGGGCTTGACCAGCCACAGAGGTCGACCCGTAACGCGAATCCAACTTTGCCTCCTGCTTATTCGAGGTCCACAAAGACC
AACCGAGGTCGAGGTGGAGCATTGAAGAAAACCTCACGTAGGACCGTGTCGGCGGCGGATCCTAATACTTTCTTCACCCTCTAG
Protein sequenceShow/hide protein sequence
MSSSHNFLRLSVKAKPELKRELVSKLKGELRKAGNVTEDDEPPFVQDILDAPISQKSRLPTFDNYDGTKDLVDHVETYESIMDIHAYSDAIESRAPEDHEVDAKI
AEDQVQGGQGLDQPQRSTRNANPTLPPAYSRSTKTNRGRGGALKKTSRRTVSAADPNTFFTL