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Moc07g17370 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g17370
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr7:12434711..12435641
RNA-Seq ExpressionMoc07g17370
SyntenyMoc07g17370
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155000.1 uncharacterized protein LOC111022144 [Momordica charantia]2.5e-3759.06Show/hide
Query:  DKRNHGPPTFDGGSEKATVAKEWVRELEALYACL-------------------------VAAAEDHANVPVTSAKFKDLLYDCYFLEIVKNPKEVEFLHL
        D + +GPPTFDG SE+AT A+EW+RELEA YA L                         +AAAEDHANV +  A+FKDLLYD Y+LE VK+ KE EFLHL
Subjt:  DKRNHGPPTFDGGSEKATVAKEWVRELEALYACL-------------------------VAAAEDHANVPVTSAKFKDLLYDCYFLEIVKNPKEVEFLHL

Query:  TQGTLMVAQYERKFMELYRYAMELIPTEAVKIKRFVKGLRKGIKGPVEL
         QGTL VAQYERKF EL R+A+ELI   A+KIKRFVKGL KGI+GPV+L
Subjt:  TQGTLMVAQYERKFMELYRYAMELIPTEAVKIKRFVKGLRKGIKGPVEL

XP_022156326.1 uncharacterized protein LOC111023247 [Momordica charantia]2.0e-3961.07Show/hide
Query:  DKRNHGPPTFDGGSEKATVAKEWVRELEALYACL-------------------------VAAAEDHANVPVTSAKFKDLLYDCYFLEIVKNPKEVEFLHL
        D + +GPPTFDG SE+AT  +EW+RELEALYA L                         VAAAED+ANVP+  A+FK+LLYD Y+ E VK+ KE EFLHL
Subjt:  DKRNHGPPTFDGGSEKATVAKEWVRELEALYACL-------------------------VAAAEDHANVPVTSAKFKDLLYDCYFLEIVKNPKEVEFLHL

Query:  TQGTLMVAQYERKFMELYRYAMELIPTEAVKIKRFVKGLRKGIKGPVEL
         QGTL VAQYERKF EL R+A+ELIPTEA+KIKRFVKGLRKGI+GPV+L
Subjt:  TQGTLMVAQYERKFMELYRYAMELIPTEAVKIKRFVKGLRKGIKGPVEL

XP_022156330.1 uncharacterized protein LOC111023250 [Momordica charantia]1.3e-4163.76Show/hide
Query:  DKRNHGPPTFDGGSEKATVAKEWVRELEALYACL-------------------------VAAAEDHANVPVTSAKFKDLLYDCYFLEIVKNPKEVEFLHL
        D + +GPPTFDGGS+KAT A+EWVRELEALY  L                         VAAAEDHAN+PVT A+FKDLLYD Y+ E VK+ KE EFLH 
Subjt:  DKRNHGPPTFDGGSEKATVAKEWVRELEALYACL-------------------------VAAAEDHANVPVTSAKFKDLLYDCYFLEIVKNPKEVEFLHL

Query:  TQGTLMVAQYERKFMELYRYAMELIPTEAVKIKRFVKGLRKGIKGPVEL
        +QGTL VAQYERKF EL R+A ELIPTEA+KIKRFVKGLRKGI+GPV+L
Subjt:  TQGTLMVAQYERKFMELYRYAMELIPTEAVKIKRFVKGLRKGIKGPVEL

XP_022156546.1 uncharacterized protein LOC111023424 [Momordica charantia]2.2e-3861.07Show/hide
Query:  DKRNHGPPTFDGGSEKATVAKEWVRELEALYACL-------------------------VAAAEDHANVPVTSAKFKDLLYDCYFLEIVKNPKEVEFLHL
        D + +GPPTF GGSE+AT+A+EWVRELEALYA L                         VAA EDHANVPV  A+FK+LLYD Y+ E V++ KEVEFLHL
Subjt:  DKRNHGPPTFDGGSEKATVAKEWVRELEALYACL-------------------------VAAAEDHANVPVTSAKFKDLLYDCYFLEIVKNPKEVEFLHL

Query:  TQGTLMVAQYERKFMELYRYAMELIPTEAVKIKRFVKGLRKGIKGPVEL
         QGTL VAQYERKF EL  +A+ELIPTEA+KIKRFVKGL KGI+G V+L
Subjt:  TQGTLMVAQYERKFMELYRYAMELIPTEAVKIKRFVKGLRKGIKGPVEL

XP_022158637.1 uncharacterized protein LOC111025088 [Momordica charantia]1.1e-4062.42Show/hide
Query:  DKRNHGPPTFDGGSEKATVAKEWVRELEALYACL-------------------------VAAAEDHANVPVTSAKFKDLLYDCYFLEIVKNPKEVEFLHL
        D + +GPPTFDGGSE+AT A+ WVRELEALYA L                         +A AEDHANVPV  A+FKDLLYD Y+ E VK+ KE EFLHL
Subjt:  DKRNHGPPTFDGGSEKATVAKEWVRELEALYACL-------------------------VAAAEDHANVPVTSAKFKDLLYDCYFLEIVKNPKEVEFLHL

Query:  TQGTLMVAQYERKFMELYRYAMELIPTEAVKIKRFVKGLRKGIKGPVEL
         QGTL VAQYERKF EL R+A+E IPTEA+KIKRFVKGLRKGI+GPV+L
Subjt:  TQGTLMVAQYERKFMELYRYAMELIPTEAVKIKRFVKGLRKGIKGPVEL

TrEMBL top hitse value%identityAlignment
A0A6J1DL73 uncharacterized protein LOC1110221441.2e-3759.06Show/hide
Query:  DKRNHGPPTFDGGSEKATVAKEWVRELEALYACL-------------------------VAAAEDHANVPVTSAKFKDLLYDCYFLEIVKNPKEVEFLHL
        D + +GPPTFDG SE+AT A+EW+RELEA YA L                         +AAAEDHANV +  A+FKDLLYD Y+LE VK+ KE EFLHL
Subjt:  DKRNHGPPTFDGGSEKATVAKEWVRELEALYACL-------------------------VAAAEDHANVPVTSAKFKDLLYDCYFLEIVKNPKEVEFLHL

Query:  TQGTLMVAQYERKFMELYRYAMELIPTEAVKIKRFVKGLRKGIKGPVEL
         QGTL VAQYERKF EL R+A+ELI   A+KIKRFVKGL KGI+GPV+L
Subjt:  TQGTLMVAQYERKFMELYRYAMELIPTEAVKIKRFVKGLRKGIKGPVEL

A0A6J1DQ01 uncharacterized protein LOC1110232506.2e-4263.76Show/hide
Query:  DKRNHGPPTFDGGSEKATVAKEWVRELEALYACL-------------------------VAAAEDHANVPVTSAKFKDLLYDCYFLEIVKNPKEVEFLHL
        D + +GPPTFDGGS+KAT A+EWVRELEALY  L                         VAAAEDHAN+PVT A+FKDLLYD Y+ E VK+ KE EFLH 
Subjt:  DKRNHGPPTFDGGSEKATVAKEWVRELEALYACL-------------------------VAAAEDHANVPVTSAKFKDLLYDCYFLEIVKNPKEVEFLHL

Query:  TQGTLMVAQYERKFMELYRYAMELIPTEAVKIKRFVKGLRKGIKGPVEL
        +QGTL VAQYERKF EL R+A ELIPTEA+KIKRFVKGLRKGI+GPV+L
Subjt:  TQGTLMVAQYERKFMELYRYAMELIPTEAVKIKRFVKGLRKGIKGPVEL

A0A6J1DUM2 uncharacterized protein LOC1110232479.8e-4061.07Show/hide
Query:  DKRNHGPPTFDGGSEKATVAKEWVRELEALYACL-------------------------VAAAEDHANVPVTSAKFKDLLYDCYFLEIVKNPKEVEFLHL
        D + +GPPTFDG SE+AT  +EW+RELEALYA L                         VAAAED+ANVP+  A+FK+LLYD Y+ E VK+ KE EFLHL
Subjt:  DKRNHGPPTFDGGSEKATVAKEWVRELEALYACL-------------------------VAAAEDHANVPVTSAKFKDLLYDCYFLEIVKNPKEVEFLHL

Query:  TQGTLMVAQYERKFMELYRYAMELIPTEAVKIKRFVKGLRKGIKGPVEL
         QGTL VAQYERKF EL R+A+ELIPTEA+KIKRFVKGLRKGI+GPV+L
Subjt:  TQGTLMVAQYERKFMELYRYAMELIPTEAVKIKRFVKGLRKGIKGPVEL

A0A6J1DVA0 uncharacterized protein LOC1110234241.1e-3861.07Show/hide
Query:  DKRNHGPPTFDGGSEKATVAKEWVRELEALYACL-------------------------VAAAEDHANVPVTSAKFKDLLYDCYFLEIVKNPKEVEFLHL
        D + +GPPTF GGSE+AT+A+EWVRELEALYA L                         VAA EDHANVPV  A+FK+LLYD Y+ E V++ KEVEFLHL
Subjt:  DKRNHGPPTFDGGSEKATVAKEWVRELEALYACL-------------------------VAAAEDHANVPVTSAKFKDLLYDCYFLEIVKNPKEVEFLHL

Query:  TQGTLMVAQYERKFMELYRYAMELIPTEAVKIKRFVKGLRKGIKGPVEL
         QGTL VAQYERKF EL  +A+ELIPTEA+KIKRFVKGL KGI+G V+L
Subjt:  TQGTLMVAQYERKFMELYRYAMELIPTEAVKIKRFVKGLRKGIKGPVEL

A0A6J1DXQ7 uncharacterized protein LOC1110250885.2e-4162.42Show/hide
Query:  DKRNHGPPTFDGGSEKATVAKEWVRELEALYACL-------------------------VAAAEDHANVPVTSAKFKDLLYDCYFLEIVKNPKEVEFLHL
        D + +GPPTFDGGSE+AT A+ WVRELEALYA L                         +A AEDHANVPV  A+FKDLLYD Y+ E VK+ KE EFLHL
Subjt:  DKRNHGPPTFDGGSEKATVAKEWVRELEALYACL-------------------------VAAAEDHANVPVTSAKFKDLLYDCYFLEIVKNPKEVEFLHL

Query:  TQGTLMVAQYERKFMELYRYAMELIPTEAVKIKRFVKGLRKGIKGPVEL
         QGTL VAQYERKF EL R+A+E IPTEA+KIKRFVKGLRKGI+GPV+L
Subjt:  TQGTLMVAQYERKFMELYRYAMELIPTEAVKIKRFVKGLRKGIKGPVEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAAGGGAAGGAAGCAAGGCTTGATGAATTTGGTGGAGAAGCTGCTGGAATTTATAGGTGTACATAATTGGTTAGACAAGCGTAATCATGGACCCCCTACC
TTTGACGGAGGAAGCGAGAAAGCGACAGTAGCAAAAGAGTGGGTCAGAGAGTTGGAAGCTCTTTACGCGTGTCTAGTAGCAGCGGCAGAAGACCATGCTAATGTA
CCGGTCACGTCGGCGAAGTTCAAGGACTTGTTGTATGACTGCTATTTCCTAGAGATTGTGAAAAATCCAAAGGAGGTAGAGTTCCTCCATCTCACCCAAGGAACC
TTAATGGTAGCACAATATGAAAGAAAGTTTATGGAACTCTATCGTTATGCTATGGAATTAATTCCCACCGAGGCAGTGAAGATCAAGAGGTTTGTTAAAGGCTTG
CGCAAGGGGATTAAAGGACCAGTGGAACTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCAAGGGAAGGAAGCAAGGCTTGATGAATTTGGTGGAGAAGCTGCTGGAATTTATAGGTGTACATAATTGGTTAGACAAGCGTAATCATGGACCCCCTACC
TTTGACGGAGGAAGCGAGAAAGCGACAGTAGCAAAAGAGTGGGTCAGAGAGTTGGAAGCTCTTTACGCGTGTCTAGTAGCAGCGGCAGAAGACCATGCTAATGTA
CCGGTCACGTCGGCGAAGTTCAAGGACTTGTTGTATGACTGCTATTTCCTAGAGATTGTGAAAAATCCAAAGGAGGTAGAGTTCCTCCATCTCACCCAAGGAACC
TTAATGGTAGCACAATATGAAAGAAAGTTTATGGAACTCTATCGTTATGCTATGGAATTAATTCCCACCGAGGCAGTGAAGATCAAGAGGTTTGTTAAAGGCTTG
CGCAAGGGGATTAAAGGACCAGTGGAACTTTAG
Protein sequenceShow/hide protein sequence
MIKGRKQGLMNLVEKLLEFIGVHNWLDKRNHGPPTFDGGSEKATVAKEWVRELEALYACLVAAAEDHANVPVTSAKFKDLLYDCYFLEIVKNPKEVEFLHLTQGT
LMVAQYERKFMELYRYAMELIPTEAVKIKRFVKGLRKGIKGPVEL