| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0026154.1 gag/pol protein [Cucumis melo var. makuwa] | 3.2e-19 | 43.83 | Show/hide |
Query: LKRLKKLRKYGQPMYAMLCTRYDICDTVGIVSRAVVWSSIKQRCIAYSKMEAEYVVACEPGKDVK-----------------------------------
++R+ G MYAMLCTR DIC VGIV SSIKQ CIA S MEAEYV ACE K+
Subjt: LKRLKKLRKYGQPMYAMLCTRYDICDTVGIVSRAVVWSSIKQRCIAYSKMEAEYVVACEPGKDVK-----------------------------------
Query: -------------------VQRWDVIVTKIASEHNIADPFTKALMAKVFEGHLESSDLRDMY
+QR DVIVTKI SEHNIAD FTK L AKVFEGHLES LRDMY
Subjt: -------------------VQRWDVIVTKIASEHNIADPFTKALMAKVFEGHLESSDLRDMY
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| KAA0053385.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 1.9e-19 | 43.83 | Show/hide |
Query: LKRLKKLRKYGQPMYAMLCTRYDICDTVGIVSRAVVWSSIKQRCIAYSKMEAEYVVACEPGKDV------------------------------------
++R+ G MY MLCTR DIC VGIV SSIKQ CIA S ME EYV AC+ K+
Subjt: LKRLKKLRKYGQPMYAMLCTRYDICDTVGIVSRAVVWSSIKQRCIAYSKMEAEYVVACEPGKDV------------------------------------
Query: ------------------KVQRWDVIVTKIASEHNIADPFTKALMAKVFEGHLESSDLRDMY
VQR DVIVTKIASEHNIADPFTK L AKVFEGHLES LRDMY
Subjt: ------------------KVQRWDVIVTKIASEHNIADPFTKALMAKVFEGHLESSDLRDMY
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| KAA0060794.1 putative Integrase core domain [Cucumis melo var. makuwa] | 1.4e-22 | 44.57 | Show/hide |
Query: LKRLKKLRKYGQPMYAMLCTRYDICDTVGIVSR-------------AVVWSSIKQRCIAYSKMEAEYVVACEPGKDVK----------------------
++R+ G MYAMLCTR DIC VGIVSR AVVW SIKQRCIA S MEAEYV ACE K+
Subjt: LKRLKKLRKYGQPMYAMLCTRYDICDTVGIVSR-------------AVVWSSIKQRCIAYSKMEAEYVVACEPGKDVK----------------------
Query: --------------------------------VQRWDVIVTKIASEHNIADPFTKALMAKVFEGHLESSDLRDMY
VQR DVIVTKIASEHNIADPFTK L AKVF+ HLES LRDMY
Subjt: --------------------------------VQRWDVIVTKIASEHNIADPFTKALMAKVFEGHLESSDLRDMY
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| KAA0063740.1 gag/pol protein [Cucumis melo var. makuwa] | 3.9e-25 | 56.2 | Show/hide |
Query: LKRLKKLRKYGQPMYAMLCTRYDICDTVGIVS-------------RAVVWSSIKQRCIAYSKMEAEYVVACEP-GKDVK---------------VQRWDV
++R+ G +Y MLCTR DIC VGIVS RAVVW SIKQ CIA S MEAEYV ACE G K VQR DV
Subjt: LKRLKKLRKYGQPMYAMLCTRYDICDTVGIVS-------------RAVVWSSIKQRCIAYSKMEAEYVVACEP-GKDVK---------------VQRWDV
Query: IVTKIASEHNIADPFTKALMAKVFEGHLESSDLRDMY
IVTKIASEHNI DPFTK L AKVFEGHLES LRDMY
Subjt: IVTKIASEHNIADPFTKALMAKVFEGHLESSDLRDMY
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| TYK20422.1 gag/pol protein [Cucumis melo var. makuwa] | 7.6e-21 | 43.41 | Show/hide |
Query: LKRLKKLRKYGQPMYAMLCTRYDICDTVGIVSR-------------------AVVWSSIKQRC-IAYSKMEAEYVVACEPGKDVK---------------
++R+ G MYAMLCTR DIC VGIVSR AVVW SIKQ C IA S MEAEYVVACE K+
Subjt: LKRLKKLRKYGQPMYAMLCTRYDICDTVGIVSR-------------------AVVWSSIKQRC-IAYSKMEAEYVVACEPGKDVK---------------
Query: ---------------------------------------VQRWDVIVTKIASEHNIADPFTKALMAKVFEGHLESSDLRDMY
VQR DVIVTKIASEHNIADPFTK L AKVFE HLES LRDMY
Subjt: ---------------------------------------VQRWDVIVTKIASEHNIADPFTKALMAKVFEGHLESSDLRDMY
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SKC5 Gag/pol protein | 1.6e-19 | 43.83 | Show/hide |
Query: LKRLKKLRKYGQPMYAMLCTRYDICDTVGIVSRAVVWSSIKQRCIAYSKMEAEYVVACEPGKDVK-----------------------------------
++R+ G MYAMLCTR DIC VGIV SSIKQ CIA S MEAEYV ACE K+
Subjt: LKRLKKLRKYGQPMYAMLCTRYDICDTVGIVSRAVVWSSIKQRCIAYSKMEAEYVVACEPGKDVK-----------------------------------
Query: -------------------VQRWDVIVTKIASEHNIADPFTKALMAKVFEGHLESSDLRDMY
+QR DVIVTKI SEHNIAD FTK L AKVFEGHLES LRDMY
Subjt: -------------------VQRWDVIVTKIASEHNIADPFTKALMAKVFEGHLESSDLRDMY
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| A0A5A7UI63 Putative gag-pol polyprotein | 9.1e-20 | 43.83 | Show/hide |
Query: LKRLKKLRKYGQPMYAMLCTRYDICDTVGIVSRAVVWSSIKQRCIAYSKMEAEYVVACEPGKDV------------------------------------
++R+ G MY MLCTR DIC VGIV SSIKQ CIA S ME EYV AC+ K+
Subjt: LKRLKKLRKYGQPMYAMLCTRYDICDTVGIVSRAVVWSSIKQRCIAYSKMEAEYVVACEPGKDV------------------------------------
Query: ------------------KVQRWDVIVTKIASEHNIADPFTKALMAKVFEGHLESSDLRDMY
VQR DVIVTKIASEHNIADPFTK L AKVFEGHLES LRDMY
Subjt: ------------------KVQRWDVIVTKIASEHNIADPFTKALMAKVFEGHLESSDLRDMY
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| A0A5A7V0F0 Putative Integrase core domain | 6.7e-23 | 44.57 | Show/hide |
Query: LKRLKKLRKYGQPMYAMLCTRYDICDTVGIVSR-------------AVVWSSIKQRCIAYSKMEAEYVVACEPGKDVK----------------------
++R+ G MYAMLCTR DIC VGIVSR AVVW SIKQRCIA S MEAEYV ACE K+
Subjt: LKRLKKLRKYGQPMYAMLCTRYDICDTVGIVSR-------------AVVWSSIKQRCIAYSKMEAEYVVACEPGKDVK----------------------
Query: --------------------------------VQRWDVIVTKIASEHNIADPFTKALMAKVFEGHLESSDLRDMY
VQR DVIVTKIASEHNIADPFTK L AKVF+ HLES LRDMY
Subjt: --------------------------------VQRWDVIVTKIASEHNIADPFTKALMAKVFEGHLESSDLRDMY
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| A0A5A7V970 Gag/pol protein | 1.9e-25 | 56.2 | Show/hide |
Query: LKRLKKLRKYGQPMYAMLCTRYDICDTVGIVS-------------RAVVWSSIKQRCIAYSKMEAEYVVACEP-GKDVK---------------VQRWDV
++R+ G +Y MLCTR DIC VGIVS RAVVW SIKQ CIA S MEAEYV ACE G K VQR DV
Subjt: LKRLKKLRKYGQPMYAMLCTRYDICDTVGIVS-------------RAVVWSSIKQRCIAYSKMEAEYVVACEP-GKDVK---------------VQRWDV
Query: IVTKIASEHNIADPFTKALMAKVFEGHLESSDLRDMY
IVTKIASEHNI DPFTK L AKVFEGHLES LRDMY
Subjt: IVTKIASEHNIADPFTKALMAKVFEGHLESSDLRDMY
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| A0A5D3DA25 Gag/pol protein | 3.7e-21 | 43.41 | Show/hide |
Query: LKRLKKLRKYGQPMYAMLCTRYDICDTVGIVSR-------------------AVVWSSIKQRC-IAYSKMEAEYVVACEPGKDVK---------------
++R+ G MYAMLCTR DIC VGIVSR AVVW SIKQ C IA S MEAEYVVACE K+
Subjt: LKRLKKLRKYGQPMYAMLCTRYDICDTVGIVSR-------------------AVVWSSIKQRC-IAYSKMEAEYVVACEPGKDVK---------------
Query: ---------------------------------------VQRWDVIVTKIASEHNIADPFTKALMAKVFEGHLESSDLRDMY
VQR DVIVTKIASEHNIADPFTK L AKVFE HLES LRDMY
Subjt: ---------------------------------------VQRWDVIVTKIASEHNIADPFTKALMAKVFEGHLESSDLRDMY
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