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Moc07g17460 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g17460
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr7:12504670..12507731
RNA-Seq ExpressionMoc07g17460
SyntenyMoc07g17460
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0043167 - ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAD4180550.1 hypothetical protein E3N88_29141 [Mikania micrantha]1.1e-1447.83Show/hide
Query:  MKIKNGRLSKTKGIGNIQFKTNSGTELLLRDVKYVPSIIMNLISIGKLDDDCYHSEFGGNQWKLTKGSKLVAVGNRRSTIYTLQLSVARQSL
        +K+ N  LSK  G+G+I  K ++G EL+L +VK+VP I +NLIS G LD+D YH+ FG   WKLT+GS +VA G R S +YT    +++ S+
Subjt:  MKIKNGRLSKTKGIGNIQFKTNSGTELLLRDVKYVPSIIMNLISIGKLDDDCYHSEFGGNQWKLTKGSKLVAVGNRRSTIYTLQLSVARQSL

KAF7129546.1 hypothetical protein RHSIM_Rhsim10G0154200 [Rhododendron simsii]8.5e-1546.07Show/hide
Query:  MKIKNGRLSKTKGIGNIQFKTNSGTELLLRDVKYVPSIIMNLISIGKLDDDCYHSEFGGNQWKLTKGSKLVAVGNRRSTIYTLQLSVAR
        +++ N  +SK  G+G++  +TN+G +LLL+DV++VP I +NLIS GKLDD+ Y ++FG  +WKL+KGS +VA G + ST+Y +Q+ +++
Subjt:  MKIKNGRLSKTKGIGNIQFKTNSGTELLLRDVKYVPSIIMNLISIGKLDDDCYHSEFGGNQWKLTKGSKLVAVGNRRSTIYTLQLSVAR

KAF7130883.1 hypothetical protein RHSIM_Rhsim10G0164600 [Rhododendron simsii]1.4e-1444.57Show/hide
Query:  MKIKNGRLSKTKGIGNIQFKTNSGTELLLRDVKYVPSIIMNLISIGKLDDDCYHSEFGGNQWKLTKGSKLVAVGNRRSTIYTLQLSVARQSL
        +++ N  +SK  G+G++  +TN+G +LLL+DV++VP I +NLIS GKLDD+ Y ++FG  +WKL+KGS +VA G + ST+Y +Q  ++++ +
Subjt:  MKIKNGRLSKTKGIGNIQFKTNSGTELLLRDVKYVPSIIMNLISIGKLDDDCYHSEFGGNQWKLTKGSKLVAVGNRRSTIYTLQLSVARQSL

KFK32108.1 hypothetical protein AALP_AA6G199700 [Arabis alpina]8.5e-1548.31Show/hide
Query:  MKIKNGRLSKTKGIGNIQFKTNSGTELLLRDVKYVPSIIMNLISIGKLDDDCYHSEFGGNQWKLTKGSKLVAVGNRRSTIYTLQLSVAR
        +K+ N  ++K  GIG+I  +T++GT LLL+ VK+VP I +NLIS GKLDD+ ++S FGG +WKLT+GS ++A G++ S  Y +Q  V++
Subjt:  MKIKNGRLSKTKGIGNIQFKTNSGTELLLRDVKYVPSIIMNLISIGKLDDDCYHSEFGGNQWKLTKGSKLVAVGNRRSTIYTLQLSVAR

RVW91307.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]6.5e-1547.19Show/hide
Query:  MKIKNGRLSKTKGIGNIQFKTNSGTELLLRDVKYVPSIIMNLISIGKLDDDCYHSEFGGNQWKLTKGSKLVAVGNRRSTIYTLQLSVAR
        +++ N  +SK  G+G+I  +TN+G +LLLRDV++VP I +NLIS GKLDD+ Y++ F   +WKL+KGS +VA GN+  ++YT+Q  + +
Subjt:  MKIKNGRLSKTKGIGNIQFKTNSGTELLLRDVKYVPSIIMNLISIGKLDDDCYHSEFGGNQWKLTKGSKLVAVGNRRSTIYTLQLSVAR

TrEMBL top hitse value%identityAlignment
A0A087GQF6 Uncharacterized protein4.1e-1548.31Show/hide
Query:  MKIKNGRLSKTKGIGNIQFKTNSGTELLLRDVKYVPSIIMNLISIGKLDDDCYHSEFGGNQWKLTKGSKLVAVGNRRSTIYTLQLSVAR
        +K+ N  ++K  GIG+I  +T++GT LLL+ VK+VP I +NLIS GKLDD+ ++S FGG +WKLT+GS ++A G++ S  Y +Q  V++
Subjt:  MKIKNGRLSKTKGIGNIQFKTNSGTELLLRDVKYVPSIIMNLISIGKLDDDCYHSEFGGNQWKLTKGSKLVAVGNRRSTIYTLQLSVAR

A0A438BTH6 Retrovirus-related Pol polyprotein from transposon TNT 1-942.7e-1446.07Show/hide
Query:  MKIKNGRLSKTKGIGNIQFKTNSGTELLLRDVKYVPSIIMNLISIGKLDDDCYHSEFGGNQWKLTKGSKLVAVGNRRSTIYTLQLSVAR
        +++ N  +SK  G+G+I  +TN+G +LLLRDV++VP I +NLIS GKLDD+ Y++ F   +WKL+KGS +VA G +  ++YT+Q  + +
Subjt:  MKIKNGRLSKTKGIGNIQFKTNSGTELLLRDVKYVPSIIMNLISIGKLDDDCYHSEFGGNQWKLTKGSKLVAVGNRRSTIYTLQLSVAR

A0A438I3N7 Retrovirus-related Pol polyprotein from transposon TNT 1-943.2e-1547.19Show/hide
Query:  MKIKNGRLSKTKGIGNIQFKTNSGTELLLRDVKYVPSIIMNLISIGKLDDDCYHSEFGGNQWKLTKGSKLVAVGNRRSTIYTLQLSVAR
        +++ N  +SK  G+G+I  +TN+G +LLLRDV++VP I +NLIS GKLDD+ Y++ F   +WKL+KGS +VA GN+  ++YT+Q  + +
Subjt:  MKIKNGRLSKTKGIGNIQFKTNSGTELLLRDVKYVPSIIMNLISIGKLDDDCYHSEFGGNQWKLTKGSKLVAVGNRRSTIYTLQLSVAR

A0A5N6N2Q3 Integrase catalytic domain-containing protein5.4e-1547.83Show/hide
Query:  MKIKNGRLSKTKGIGNIQFKTNSGTELLLRDVKYVPSIIMNLISIGKLDDDCYHSEFGGNQWKLTKGSKLVAVGNRRSTIYTLQLSVARQSL
        +K+ N  LSK  G+G+I  K ++G EL+L +VK+VP I +NLIS G LD+D YH+ FG   WKLT+GS +VA G R S +YT    +++ S+
Subjt:  MKIKNGRLSKTKGIGNIQFKTNSGTELLLRDVKYVPSIIMNLISIGKLDDDCYHSEFGGNQWKLTKGSKLVAVGNRRSTIYTLQLSVARQSL

A0A5N6NVJ4 Uncharacterized protein1.2e-1448.35Show/hide
Query:  KIKNGRLSKTKGIGNIQFKTNSGTELLLRDVKYVPSIIMNLISIGKLDDDCYHSEFGGNQWKLTKGSKLVAVGNRRSTIYTLQLSVARQSL
        K+ N  LSK  G+G+I  K ++G EL+L +VK+VP I +NLIS G LD+D YH+ FG   WKLT GS +VA G R S +Y   L +++ S+
Subjt:  KIKNGRLSKTKGIGNIQFKTNSGTELLLRDVKYVPSIIMNLISIGKLDDDCYHSEFGGNQWKLTKGSKLVAVGNRRSTIYTLQLSVARQSL

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.7e-1344.57Show/hide
Query:  MKIKNGRLSKTKGIGNIQFKTNSGTELLLRDVKYVPSIIMNLISIGKLDDDCYHSEFGGNQWKLTKGSKLVAVGNRRSTIYTLQLSVARQSL
        +K+ N   SK  GIG+I  KTN G  L+L+DV++VP + MNLIS   LD D Y S F   +W+LTKGS ++A G  R T+Y     + +  L
Subjt:  MKIKNGRLSKTKGIGNIQFKTNSGTELLLRDVKYVPSIIMNLISIGKLDDDCYHSEFGGNQWKLTKGSKLVAVGNRRSTIYTLQLSVARQSL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATAAAGAATGGAAGACTTTCCAAGACTAAAGGAATTGGAAATATACAATTTAAGACCAATAGTGGGACTGAGTTATTACTGCGAGATGTCAAGTATGTA
CCCAGTATAATAATGAACCTTATCTCTATAGGTAAGTTGGACGATGATTGTTATCATAGTGAGTTTGGTGGAAATCAGTGGAAGCTCACCAAAGGATCCAAGTTG
GTGGCAGTTGGCAATAGAAGATCTACAATTTACACGTTGCAATTGAGTGTTGCTAGACAATCGTTGAAACAACGGATGCAATTTGCAGATAGTGTCCAAAGAGGT
AGGACTAAGCCAGCAACAAAGACAACCAGAATAGATCAGGAGAATCTGCCATCAATTGAGGAAGAACAATTGGGAAATAAAAGAACGAGAACAAGTTCTTTAGGT
TATCAGGGATTATCGTCAATTGTCAAATGGATGGGTGAATTGATGAAGTCGAGTCAGCGAACAGTTGTATCAAAGAAGACAAACCCAGTAAGTGCTAAGGAAAAG
ACAATGCGAGCAATGATTTGCATCTGGAAGTCAAGACCACGTAGATTACCTGACCTCAAGGCAAAGACAGATGAGAACATTGTAGAAGCTTTAGCTAATATTCCA
CCAGAAATTACAAGAGAAGATGCAGAATATCGTGCAAACTTGTGGAAGTCAACTGAATATCAGTCGGAACTCAAATCATATGCCTCTCAAGTGATGGATGGTACA
CTTGACATGAACAACGACGAGATTTTTGTGCAAGTCTTTGGACCAGAGAAACATGGGCGTGTTCGAGGTTATGGAGCCGGTGTTACTCCTTCTGAGTTGTTTGTG
TAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATAAAGAATGGAAGACTTTCCAAGACTAAAGGAATTGGAAATATACAATTTAAGACCAATAGTGGGACTGAGTTATTACTGCGAGATGTCAAGTATGTA
CCCAGTATAATAATGAACCTTATCTCTATAGGTAAGTTGGACGATGATTGTTATCATAGTGAGTTTGGTGGAAATCAGTGGAAGCTCACCAAAGGATCCAAGTTG
GTGGCAGTTGGCAATAGAAGATCTACAATTTACACGTTGCAATTGAGTGTTGCTAGACAATCGTTGAAACAACGGATGCAATTTGCAGATAGTGTCCAAAGAGGT
AGGACTAAGCCAGCAACAAAGACAACCAGAATAGATCAGGAGAATCTGCCATCAATTGAGGAAGAACAATTGGGAAATAAAAGAACGAGAACAAGTTCTTTAGGT
TATCAGGGATTATCGTCAATTGTCAAATGGATGGGTGAATTGATGAAGTCGAGTCAGCGAACAGTTGTATCAAAGAAGACAAACCCAGTAAGTGCTAAGGAAAAG
ACAATGCGAGCAATGATTTGCATCTGGAAGTCAAGACCACGTAGATTACCTGACCTCAAGGCAAAGACAGATGAGAACATTGTAGAAGCTTTAGCTAATATTCCA
CCAGAAATTACAAGAGAAGATGCAGAATATCGTGCAAACTTGTGGAAGTCAACTGAATATCAGTCGGAACTCAAATCATATGCCTCTCAAGTGATGGATGGTACA
CTTGACATGAACAACGACGAGATTTTTGTGCAAGTCTTTGGACCAGAGAAACATGGGCGTGTTCGAGGTTATGGAGCCGGTGTTACTCCTTCTGAGTTGTTTGTG
TAA
Protein sequenceShow/hide protein sequence
MKIKNGRLSKTKGIGNIQFKTNSGTELLLRDVKYVPSIIMNLISIGKLDDDCYHSEFGGNQWKLTKGSKLVAVGNRRSTIYTLQLSVARQSLKQRMQFADSVQRG
RTKPATKTTRIDQENLPSIEEEQLGNKRTRTSSLGYQGLSSIVKWMGELMKSSQRTVVSKKTNPVSAKEKTMRAMICIWKSRPRRLPDLKAKTDENIVEALANIP
PEITREDAEYRANLWKSTEYQSELKSYASQVMDGTLDMNNDEIFVQVFGPEKHGRVRGYGAGVTPSELFV