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Moc07g17660 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g17660
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr7:12605088..12607329
RNA-Seq ExpressionMoc07g17660
SyntenyMoc07g17660
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015388578.1 uncharacterized protein LOC107178209 [Citrus sinensis]1.0e-1039.77Show/hide
Query:  SYLWKAFQWGRELLLKGIRIRVGNGRGTHV-NDKWLPREITFKLISPCFDGADLKDSEFMTASKQWNIKKSRQFVIKEEDVEIIRRIP
        S++W++  WGR+++LKG R R+G+G    V N  WLPR  TF+ ISP     D K  + +   ++W +   RQ+ + +ED +II+RIP
Subjt:  SYLWKAFQWGRELLLKGIRIRVGNGRGTHV-NDKWLPREITFKLISPCFDGADLKDSEFMTASKQWNIKKSRQFVIKEEDVEIIRRIP

XP_022131662.1 uncharacterized protein LOC111004787 [Momordica charantia]2.9e-1038.89Show/hide
Query:  SYLWKAFQWGRELLLKGIRIRVGNGRGTHV-NDKWLPREITFKLISPCFDGADLKDSEFMTASKQWNIKKSRQFVIKEEDVEIIRRIPSS
        SY WK F WGR+LL+KG+R RVGNG   ++ +D W+PR  +F+ I+  F   D+K ++ +  + QW++     ++  EED ++I  +P S
Subjt:  SYLWKAFQWGRELLLKGIRIRVGNGRGTHV-NDKWLPREITFKLISPCFDGADLKDSEFMTASKQWNIKKSRQFVIKEEDVEIIRRIPSS

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.7e-1038.53Show/hide
Query:  SDILTHSPHSSISYLWKAFQWGRELLLKGIRIRVGNGRGTHV-NDKWLPREITFKLISPCFDGADLKDSEFMTASKQWNIKK-SRQFVIKEEDVEIIRRI
        + +L  S +S  SY WK F WGR+LL+KG+R+RVGNG      +D WLPR  TFK +       D   + F+TA   W++   S  F    ED ++I  +
Subjt:  SDILTHSPHSSISYLWKAFQWGRELLLKGIRIRVGNGRGTHV-NDKWLPREITFKLISPCFDGADLKDSEFMTASKQWNIKK-SRQFVIKEEDVEIIRRI

Query:  PSSWTEIED
        P S   ++D
Subjt:  PSSWTEIED

XP_023919968.1 uncharacterized protein LOC112031507 [Quercus suber]1.4e-0941.28Show/hide
Query:  DILTHSPHSSISYLWKAFQWGRELLLKGIRIRVGNGRGTHV-NDKWLPREITFKLISPCFDGAD--LKDSEFMTASKQWNIKKSRQFVIKEEDVEIIRRI
        DIL     SS+SY W++     E++ +G R RVGNG+ TH+ +DKWLP   TFK+ISP  D  D  +  S   +ASK W +   R+  +  E  E I +I
Subjt:  DILTHSPHSSISYLWKAFQWGRELLLKGIRIRVGNGRGTHV-NDKWLPREITFKLISPCFDGAD--LKDSEFMTASKQWNIKKSRQFVIKEEDVEIIRRI

Query:  PSSWTEIED
        P S T  +D
Subjt:  PSSWTEIED

XP_024310402.1 uncharacterized protein LOC112268687 [Brachypodium distachyon]1.4e-0933.83Show/hide
Query:  WRSVLANAIECGWLKSILGIHEEASDILTHSPHSSISYLWKAFQWGRELLLKGIRIRVGNGRGTHV-NDKWLPREITFKLISPCFDGADLKDSEFM-TAS
        WR  L  +++    K++  ++    DILT S  + +S +W+A   GR++L +G+  R+GNG  TH  ND W+PR+   + I+   D A    S+F+ + S
Subjt:  WRSVLANAIECGWLKSILGIHEEASDILTHSPHSSISYLWKAFQWGRELLLKGIRIRVGNGRGTHV-NDKWLPREITFKLISPCFDGADLKDSEFM-TAS

Query:  KQWNIKKSRQFVIKEEDVEIIRRIPSSWTEIED
          WN  K  +F +   DVEII+ IP      +D
Subjt:  KQWNIKKSRQFVIKEEDVEIIRRIPSSWTEIED

TrEMBL top hitse value%identityAlignment
A0A6J1BRN0 uncharacterized protein LOC1110047871.4e-1038.89Show/hide
Query:  SYLWKAFQWGRELLLKGIRIRVGNGRGTHV-NDKWLPREITFKLISPCFDGADLKDSEFMTASKQWNIKKSRQFVIKEEDVEIIRRIPSS
        SY WK F WGR+LL+KG+R RVGNG   ++ +D W+PR  +F+ I+  F   D+K ++ +  + QW++     ++  EED ++I  +P S
Subjt:  SYLWKAFQWGRELLLKGIRIRVGNGRGTHV-NDKWLPREITFKLISPCFDGADLKDSEFMTASKQWNIKKSRQFVIKEEDVEIIRRIPSS

A0A6J1DX30 uncharacterized protein LOC1110248748.2e-1138.53Show/hide
Query:  SDILTHSPHSSISYLWKAFQWGRELLLKGIRIRVGNGRGTHV-NDKWLPREITFKLISPCFDGADLKDSEFMTASKQWNIKK-SRQFVIKEEDVEIIRRI
        + +L  S +S  SY WK F WGR+LL+KG+R+RVGNG      +D WLPR  TFK +       D   + F+TA   W++   S  F    ED ++I  +
Subjt:  SDILTHSPHSSISYLWKAFQWGRELLLKGIRIRVGNGRGTHV-NDKWLPREITFKLISPCFDGADLKDSEFMTASKQWNIKK-SRQFVIKEEDVEIIRRI

Query:  PSSWTEIED
        P S   ++D
Subjt:  PSSWTEIED

A0A803PQQ6 Uncharacterized protein2.0e-0935.51Show/hide
Query:  DILTHSPHSSISYLWKAFQWGRELLLKGIRIRVGNGRGTHV-NDKWLPREITFKLISPCFDGADLKDSEFMTASKQWNIKKSRQFVIKEEDVEIIRRIPS
        D+L     S  S++W++  WG++LLLKG R R+GNG G  V +D WLPR +TF++        +L   +   A   W+ +   +    EEDV++I  +PS
Subjt:  DILTHSPHSSISYLWKAFQWGRELLLKGIRIRVGNGRGTHV-NDKWLPREITFKLISPCFDGADLKDSEFMTASKQWNIKKSRQFVIKEEDVEIIRRIPS

Query:  SWTEIED
            +ED
Subjt:  SWTEIED

A0A803Q6Z2 Uncharacterized protein9.1e-1040.21Show/hide
Query:  SYLWKAFQWGRELLLKGIRIRVGNGRGTH-VNDKWLPREITFKLISPCFDGADLKDSEFMTASKQWNIKKSRQFVIKEEDVEIIRRIPSSWTEIEDV
        S  WK+  WG+ELLLKG+R R+G+G   + V+  W+P    FK +       D+K ++F+T S+QW++ K +QF     DV+ I  IP S    EDV
Subjt:  SYLWKAFQWGRELLLKGIRIRVGNGRGTH-VNDKWLPREITFKLISPCFDGADLKDSEFMTASKQWNIKKSRQFVIKEEDVEIIRRIPSSWTEIEDV

M5W5F3 Reverse transcriptase domain-containing protein (Fragment)5.9e-0938.64Show/hide
Query:  SYLWKAFQWGRELLLKGIRIRVGNGRGTHV-NDKWLPREITFKLISPCFDGADLKDSEFMTASKQWNIKKSRQFVIKEEDVEIIRRIP
        S++W++ QWG+ELL KG+R RVG+G    V  DKWLP    FK++SP       +  +  T+S QWN+   +  +  +++V+ I +IP
Subjt:  SYLWKAFQWGRELLLKGIRIRVGNGRGTHV-NDKWLPREITFKLISPCFDGADLKDSEFMTASKQWNIKKSRQFVIKEEDVEIIRRIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGAAAAATACCCGGGACAGTGCCTCGGCGCCTATGGGCAGCGCCACGGCACTACTGCAGCAAAAAACCGTATCAGCAGCACCGCGACGCTACAGTGCAGCG
CCGTGGCGCTCTGTGTTAGCAAATGCTATTGAATGTGGTTGGCTCAAGTCAATCCTTGGGATCCATGAGGAGGCTTCAGATATTTTAACTCATAGCCCTCACTCT
TCAATCTCCTATCTGTGGAAAGCTTTTCAATGGGGGAGAGAATTGCTGCTGAAAGGGATCCGAATTCGAGTTGGAAATGGCAGAGGAACTCATGTCAATGATAAG
TGGTTGCCGAGAGAAATTACCTTCAAACTCATTTCTCCTTGTTTTGATGGGGCGGATTTGAAAGACTCGGAGTTTATGACGGCCTCTAAACAATGGAATATTAAG
AAGTCGAGACAGTTTGTTATAAAAGAAGAAGATGTTGAGATTATTAGAAGAATTCCCTCAAGCTGGACTGAAATTGAGGATGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGAAAAATACCCGGGACAGTGCCTCGGCGCCTATGGGCAGCGCCACGGCACTACTGCAGCAAAAAACCGTATCAGCAGCACCGCGACGCTACAGTGCAGCG
CCGTGGCGCTCTGTGTTAGCAAATGCTATTGAATGTGGTTGGCTCAAGTCAATCCTTGGGATCCATGAGGAGGCTTCAGATATTTTAACTCATAGCCCTCACTCT
TCAATCTCCTATCTGTGGAAAGCTTTTCAATGGGGGAGAGAATTGCTGCTGAAAGGGATCCGAATTCGAGTTGGAAATGGCAGAGGAACTCATGTCAATGATAAG
TGGTTGCCGAGAGAAATTACCTTCAAACTCATTTCTCCTTGTTTTGATGGGGCGGATTTGAAAGACTCGGAGTTTATGACGGCCTCTAAACAATGGAATATTAAG
AAGTCGAGACAGTTTGTTATAAAAGAAGAAGATGTTGAGATTATTAGAAGAATTCCCTCAAGCTGGACTGAAATTGAGGATGTTTGA
Protein sequenceShow/hide protein sequence
MPKNTRDSASAPMGSATALLQQKTVSAAPRRYSAAPWRSVLANAIECGWLKSILGIHEEASDILTHSPHSSISYLWKAFQWGRELLLKGIRIRVGNGRGTHVNDK
WLPREITFKLISPCFDGADLKDSEFMTASKQWNIKKSRQFVIKEEDVEIIRRIPSSWTEIEDV