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Moc07g17780 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g17780
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr7:12687847..12692673
RNA-Seq ExpressionMoc07g17780
SyntenyMoc07g17780
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8516625.1 hypothetical protein F0562_016869 [Nyssa sinensis]2.9e-1046.25Show/hide
Query:  DHLLRSAILASLSPSIIPFIARTRSSGEAWIKIKTLYAKYSCDRIIDLREGLNKITKGSQSVTSYILVIRAQVDSLATAG
        D L+ +AI+ SLSP+IIPFIAR ++S EAW+ +   YAK S  RI  ++  +  +TKGSQSVT ++  ++ + D LA  G
Subjt:  DHLLRSAILASLSPSIIPFIARTRSSGEAWIKIKTLYAKYSCDRIIDLREGLNKITKGSQSVTSYILVIRAQVDSLATAG

RVX17771.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]2.2e-1050Show/hide
Query:  DHLLRSAILASLSPSIIPFIARTRSSGEAWIKIKTLYAKYSCDRIIDLREGLNKITKGSQSVTSYILVIRAQVDSLATAG
        D LL +AIL SLSP+IIPFIAR +++ EAW  +   YAK S  RI  ++  L +ITKGS  V+ ++  I+A+VD LA  G
Subjt:  DHLLRSAILASLSPSIIPFIARTRSSGEAWIKIKTLYAKYSCDRIIDLREGLNKITKGSQSVTSYILVIRAQVDSLATAG

XP_010656486.1 PREDICTED: uncharacterized protein LOC104880673 [Vitis vinifera]1.0e-1051.25Show/hide
Query:  DHLLRSAILASLSPSIIPFIARTRSSGEAWIKIKTLYAKYSCDRIIDLREGLNKITKGSQSVTSYILVIRAQVDSLATAG
        D LL +AIL SLSPSIIPFIAR +++ EAW  +   YAK S  RI  ++  L +ITKGS  V+ ++  I+A+VD LA  G
Subjt:  DHLLRSAILASLSPSIIPFIARTRSSGEAWIKIKTLYAKYSCDRIIDLREGLNKITKGSQSVTSYILVIRAQVDSLATAG

XP_012852928.1 PREDICTED: uncharacterized protein LOC105972513 [Erythranthe guttata]1.3e-1046.75Show/hide
Query:  DHLLRSAILASLSPSIIPFIARTRSSGEAWIKIKTLYAKYSCDRIIDLREGLNKITKGSQSVTSYILVIRAQVDSLA
        D+L+ +AI+ SLSP++IPFIA  ++S EAW+ +   YA+ SC RI  L+E L  +TKG+QS+T Y+  +++  D LA
Subjt:  DHLLRSAILASLSPSIIPFIARTRSSGEAWIKIKTLYAKYSCDRIIDLREGLNKITKGSQSVTSYILVIRAQVDSLA

XP_015896837.1 uncharacterized protein LOC107430506 [Ziziphus jujuba]1.1e-1251.25Show/hide
Query:  DHLLRSAILASLSPSIIPFIARTRSSGEAWIKIKTLYAKYSCDRIIDLREGLNKITKGSQSVTSYILVIRAQVDSLATAG
        DHLLRSA+LASL P+I+ F+A   SS EAW  + T+YAK S  RI+ +RE L+KITK ++S+  Y+  +++  D LA AG
Subjt:  DHLLRSAILASLSPSIIPFIARTRSSGEAWIKIKTLYAKYSCDRIIDLREGLNKITKGSQSVTSYILVIRAQVDSLATAG

TrEMBL top hitse value%identityAlignment
A0A2N9FNX4 CCHC-type domain-containing protein1.1e-1048.72Show/hide
Query:  LDHLLRSAILASLSPSIIPFIARTRSSGEAWIKIKTLYAKYSCDRIIDLREGLNKITKGSQSVTSYILVIRAQVDSLA
        LD LL SAILASLS +IIPFIA  ++S EAW K+ T+YAK S  R++ +++ L K+++ ++SVT Y+ +++   D LA
Subjt:  LDHLLRSAILASLSPSIIPFIARTRSSGEAWIKIKTLYAKYSCDRIIDLREGLNKITKGSQSVTSYILVIRAQVDSLA

A0A438K988 Retrovirus-related Pol polyprotein from transposon RE11.1e-1050Show/hide
Query:  DHLLRSAILASLSPSIIPFIARTRSSGEAWIKIKTLYAKYSCDRIIDLREGLNKITKGSQSVTSYILVIRAQVDSLATAG
        D LL +AIL SLSP+IIPFIAR +++ EAW  +   YAK S  RI  ++  L +ITKGS  V+ ++  I+A+VD LA  G
Subjt:  DHLLRSAILASLSPSIIPFIARTRSSGEAWIKIKTLYAKYSCDRIIDLREGLNKITKGSQSVTSYILVIRAQVDSLATAG

A0A438KKL3 Retrovirus-related Pol polyprotein from transposon RE21.4e-1048.75Show/hide
Query:  DHLLRSAILASLSPSIIPFIARTRSSGEAWIKIKTLYAKYSCDRIIDLREGLNKITKGSQSVTSYILVIRAQVDSLATAG
        D LL +AIL SLSP+IIPFIAR +++ EAW  + + YAK S  +I  ++  L +ITKGS  V+ ++  I+A+VD LA  G
Subjt:  DHLLRSAILASLSPSIIPFIARTRSSGEAWIKIKTLYAKYSCDRIIDLREGLNKITKGSQSVTSYILVIRAQVDSLATAG

A0A5J4ZDA4 CCHC-type domain-containing protein1.4e-1046.25Show/hide
Query:  DHLLRSAILASLSPSIIPFIARTRSSGEAWIKIKTLYAKYSCDRIIDLREGLNKITKGSQSVTSYILVIRAQVDSLATAG
        D L+ +AI+ SLSP+IIPFIAR ++S EAW+ +   YAK S  RI  ++  +  +TKGSQSVT ++  ++ + D LA  G
Subjt:  DHLLRSAILASLSPSIIPFIARTRSSGEAWIKIKTLYAKYSCDRIIDLREGLNKITKGSQSVTSYILVIRAQVDSLATAG

A0A6P4BCX5 uncharacterized protein LOC1074305065.2e-1351.25Show/hide
Query:  DHLLRSAILASLSPSIIPFIARTRSSGEAWIKIKTLYAKYSCDRIIDLREGLNKITKGSQSVTSYILVIRAQVDSLATAG
        DHLLRSA+LASL P+I+ F+A   SS EAW  + T+YAK S  RI+ +RE L+KITK ++S+  Y+  +++  D LA AG
Subjt:  DHLLRSAILASLSPSIIPFIARTRSSGEAWIKIKTLYAKYSCDRIIDLREGLNKITKGSQSVTSYILVIRAQVDSLATAG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCAGACAAAGCCTCAACGACTCTTTAAGGTGGCTGTGAAACGCGGCGTGATGTTGCGGAGTTTGTTGGAGAATAGGTCGAGCCGAGGTGGAGAAGGATGG
TCCAAACAACTATTCAGAGCCTCTTACTTGAGAAATCGCTATCTTGATCATCTTCTTCGTAGTGCAATTCTTGCTTCTTTATCTCCGTCTATTATTCCTTTTATA
GCCAGGACAAGATCTTCTGGTGAAGCTTGGATCAAAATTAAAACTCTGTATGCCAAGTACTCTTGCGATCGTATTATAGATCTTCGTGAAGGACTCAATAAGATC
ACCAAAGGCTCTCAAAGTGTCACTTCTTATATACTAGTCATTCGAGCACAAGTTGATTCACTTGCTACAGCTGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCCAGACAAAGCCTCAACGACTCTTTAAGGTGGCTGTGAAACGCGGCGTGATGTTGCGGAGTTTGTTGGAGAATAGGTCGAGCCGAGGTGGAGAAGGATGG
TCCAAACAACTATTCAGAGCCTCTTACTTGAGAAATCGCTATCTTGATCATCTTCTTCGTAGTGCAATTCTTGCTTCTTTATCTCCGTCTATTATTCCTTTTATA
GCCAGGACAAGATCTTCTGGTGAAGCTTGGATCAAAATTAAAACTCTGTATGCCAAGTACTCTTGCGATCGTATTATAGATCTTCGTGAAGGACTCAATAAGATC
ACCAAAGGCTCTCAAAGTGTCACTTCTTATATACTAGTCATTCGAGCACAAGTTGATTCACTTGCTACAGCTGGATAA
Protein sequenceShow/hide protein sequence
MFQTKPQRLFKVAVKRGVMLRSLLENRSSRGGEGWSKQLFRASYLRNRYLDHLLRSAILASLSPSIIPFIARTRSSGEAWIKIKTLYAKYSCDRIIDLREGLNKI
TKGSQSVTSYILVIRAQVDSLATAG