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Moc07g18150 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g18150
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr7:12941133..12941885
RNA-Seq ExpressionMoc07g18150
SyntenyMoc07g18150
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PSS13376.1 Zinc finger, CCHC-type protein [Actinidia chinensis var. chinensis]1.2e-1171.19Show/hide
Query:  RGSLEQYDKVHLLLKAIDEQFVTPYKAQVSTLIMQFPSMKFNGIGGVRDQIMRMKDIAA
        RGS+EQYDKV  LLKAI+EQF T  KA  STLIMQF S++  GI GVRD IMRM+DIAA
Subjt:  RGSLEQYDKVHLLLKAIDEQFVTPYKAQVSTLIMQFPSMKFNGIGGVRDQIMRMKDIAA

RYE25001.1 hypothetical protein EOP45_05245, partial [Sphingobacteriaceae bacterium]3.7e-1371.19Show/hide
Query:  RGSLEQYDKVHLLLKAIDEQFVTPYKAQVSTLIMQFPSMKFNGIGGVRDQIMRMKDIAA
        RGS+E+YD V LL+KAID+QFVT  KA  STLIMQF S+K  GIGG+RD IMRM+DIAA
Subjt:  RGSLEQYDKVHLLLKAIDEQFVTPYKAQVSTLIMQFPSMKFNGIGGVRDQIMRMKDIAA

XP_019436009.1 PREDICTED: uncharacterized protein LOC109342486 [Lupinus angustifolius]8.3e-1369.49Show/hide
Query:  RGSLEQYDKVHLLLKAIDEQFVTPYKAQVSTLIMQFPSMKFNGIGGVRDQIMRMKDIAA
        RGS+EQYD +HLL+KAIDEQFVT  KA VST+IMQF S+K   +GGVRD IM M+DI A
Subjt:  RGSLEQYDKVHLLLKAIDEQFVTPYKAQVSTLIMQFPSMKFNGIGGVRDQIMRMKDIAA

XP_022847543.1 sodium/calcium exchanger NCL1-like [Olea europaea var. sylvestris]4.1e-1272.88Show/hide
Query:  RGSLEQYDKVHLLLKAIDEQFVTPYKAQVSTLIMQFPSMKFNGIGGVRDQIMRMKDIAA
        RGS+EQYDKV  LLKAIDEQFVT  KA  STLIMQF S+K   I GV D IMRM+DIAA
Subjt:  RGSLEQYDKVHLLLKAIDEQFVTPYKAQVSTLIMQFPSMKFNGIGGVRDQIMRMKDIAA

XP_022877045.1 uncharacterized protein LOC111395295 [Olea europaea var. sylvestris]8.3e-1374.58Show/hide
Query:  RGSLEQYDKVHLLLKAIDEQFVTPYKAQVSTLIMQFPSMKFNGIGGVRDQIMRMKDIAA
        RGS+EQYD V  LLKAID+QFVT  KA  STLIMQF SMK  GI GVRD IMRM+DIAA
Subjt:  RGSLEQYDKVHLLLKAIDEQFVTPYKAQVSTLIMQFPSMKFNGIGGVRDQIMRMKDIAA

TrEMBL top hitse value%identityAlignment
A0A2R6QQI3 Zinc finger, CCHC-type protein5.8e-1271.19Show/hide
Query:  RGSLEQYDKVHLLLKAIDEQFVTPYKAQVSTLIMQFPSMKFNGIGGVRDQIMRMKDIAA
        RGS+EQYDKV  LLKAI+EQF T  KA  STLIMQF S++  GI GVRD IMRM+DIAA
Subjt:  RGSLEQYDKVHLLLKAIDEQFVTPYKAQVSTLIMQFPSMKFNGIGGVRDQIMRMKDIAA

A0A438EQI6 Retrovirus-related Pol polyprotein from transposon TNT 1-946.4e-1162.71Show/hide
Query:  RGSLEQYDKVHLLLKAIDEQFVTPYKAQVSTLIMQFPSMKFNGIGGVRDQIMRMKDIAA
        RGS+EQ++ VH LLKAIDEQF+T  KA  STLI++F S+KF GI GVR+ IM M+D+ A
Subjt:  RGSLEQYDKVHLLLKAIDEQFVTPYKAQVSTLIMQFPSMKFNGIGGVRDQIMRMKDIAA

A0A438HHU9 Uncharacterized protein4.9e-1164.41Show/hide
Query:  RGSLEQYDKVHLLLKAIDEQFVTPYKAQVSTLIMQFPSMKFNGIGGVRDQIMRMKDIAA
        RGS+EQ++ VH LLKAIDEQF+T  KA  STLIM+F S+KF GI GVR+ IM M+D+ A
Subjt:  RGSLEQYDKVHLLLKAIDEQFVTPYKAQVSTLIMQFPSMKFNGIGGVRDQIMRMKDIAA

A0A4V1T1E6 Uncharacterized protein (Fragment)1.8e-1371.19Show/hide
Query:  RGSLEQYDKVHLLLKAIDEQFVTPYKAQVSTLIMQFPSMKFNGIGGVRDQIMRMKDIAA
        RGS+E+YD V LL+KAID+QFVT  KA  STLIMQF S+K  GIGG+RD IMRM+DIAA
Subjt:  RGSLEQYDKVHLLLKAIDEQFVTPYKAQVSTLIMQFPSMKFNGIGGVRDQIMRMKDIAA

A0A7J0ER39 CCHC-type domain-containing protein2.2e-1169.49Show/hide
Query:  RGSLEQYDKVHLLLKAIDEQFVTPYKAQVSTLIMQFPSMKFNGIGGVRDQIMRMKDIAA
        RGS+EQYDKV  LLKAI+EQF T  KA  STLIMQF S++  GI GVR+ IMRM+DIAA
Subjt:  RGSLEQYDKVHLLLKAIDEQFVTPYKAQVSTLIMQFPSMKFNGIGGVRDQIMRMKDIAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTGGATTCGACCCGCCTCCAGTTAGCTCGGAGGACTTCGCCGAGCCGACCTCCGCCCCGCCGAAGTGGGGGCCAATGTTGGAGGCGAATCCTAGCCTGCCA
CGTGTCATGATCGAAAAAGTGAACTGGTCAAACACGCAGGCGAGATGGAGAAGTCGACTCCAAAATACTCAGGGTGTGTCAGAATCCCTGTCGGGCCCAGTTGCT
ATAAATAGAAACCCTTGCCTTATATGCAAGGTACGCAATCCTAAGTCTCAAGAAGGGTTCAGAGAAGGAGTGGGACCACTGGCCATAGTTCGTCCTGAGCATTCC
GATCTAAATCGTATCCGAGCTCGGGGTTCACTTGAGCAATACGACAAGGTTCACCTCTTGCTGAAAGCAATAGACGAACAATTTGTCACTCCATATAAGGCACAA
GTAAGTACCCTCATCATGCAATTTCCATCCATGAAGTTCAATGGAATTGGAGGAGTGCGTGACCAGATCATGCGAATGAAGGATATTGCAGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGTGGATTCGACCCGCCTCCAGTTAGCTCGGAGGACTTCGCCGAGCCGACCTCCGCCCCGCCGAAGTGGGGGCCAATGTTGGAGGCGAATCCTAGCCTGCCA
CGTGTCATGATCGAAAAAGTGAACTGGTCAAACACGCAGGCGAGATGGAGAAGTCGACTCCAAAATACTCAGGGTGTGTCAGAATCCCTGTCGGGCCCAGTTGCT
ATAAATAGAAACCCTTGCCTTATATGCAAGGTACGCAATCCTAAGTCTCAAGAAGGGTTCAGAGAAGGAGTGGGACCACTGGCCATAGTTCGTCCTGAGCATTCC
GATCTAAATCGTATCCGAGCTCGGGGTTCACTTGAGCAATACGACAAGGTTCACCTCTTGCTGAAAGCAATAGACGAACAATTTGTCACTCCATATAAGGCACAA
GTAAGTACCCTCATCATGCAATTTCCATCCATGAAGTTCAATGGAATTGGAGGAGTGCGTGACCAGATCATGCGAATGAAGGATATTGCAGCCTAA
Protein sequenceShow/hide protein sequence
MRGFDPPPVSSEDFAEPTSAPPKWGPMLEANPSLPRVMIEKVNWSNTQARWRSRLQNTQGVSESLSGPVAINRNPCLICKVRNPKSQEGFREGVGPLAIVRPEHS
DLNRIRARGSLEQYDKVHLLLKAIDEQFVTPYKAQVSTLIMQFPSMKFNGIGGVRDQIMRMKDIAA