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Moc07g18700 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g18700
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr7:13463979..13478268
RNA-Seq ExpressionMoc07g18700
SyntenyMoc07g18700
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143486.1 uncharacterized protein LOC111013362 [Momordica charantia]1.7e-3596.34Show/hide
Query:  SVQVEILDNPSILEPDLIEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGL
        SV VEILDNPSI EPDL+EIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGL
Subjt:  SVQVEILDNPSILEPDLIEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGL
XP_022156575.1 uncharacterized protein LOC111023451 [Momordica charantia]4.2e-3491.46Show/hide
Query:  SVQVEILDNPSILEPDLIEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGL
        SV VEILDNPSILEPDL+E+GAPESSWMDPI DFIRGNSPQDPKERRKLARR AR VVRDGALYRRGFSLPLL+CLTPEEGL
Subjt:  SVQVEILDNPSILEPDLIEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGL
XP_022158219.1 protein NYNRIN-like [Momordica charantia]4.2e-3493.9Show/hide
Query:  SVQVEILDNPSILEPDLIEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGL
        SV VEILDNPSI EPDL+EIGAPESSWMDPIADFIRGNSPQDPKERRKLA R ARFVVRDGALYRRGFSLPLLRCLTPEEGL
Subjt:  SVQVEILDNPSILEPDLIEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGL
XP_022158520.1 uncharacterized protein LOC111024991 [Momordica charantia]1.9e-3491.46Show/hide
Query:  SVQVEILDNPSILEPDLIEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGL
        SV VEILDNPSILEPDL+EIGAPESSWM+PI DFI+GNSPQDPKERRKLARRAARFV+RDGALYRRGFSLPLL+CLTPEEGL
Subjt:  SVQVEILDNPSILEPDLIEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGL
XP_022158854.1 uncharacterized protein LOC111025319 [Momordica charantia]4.2e-3495.12Show/hide
Query:  SVQVEILDNPSILEPDLIEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGL
        SV VEILDNPSILEPDL+EIGAPESSWMD IADFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLT EEGL
Subjt:  SVQVEILDNPSILEPDLIEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGL
TrEMBL top hitse value%identityAlignment
A0A6J1CQD7 Ribonuclease H8.3e-3696.34Show/hide
Query:  SVQVEILDNPSILEPDLIEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGL
        SV VEILDNPSI EPDL+EIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGL
Subjt:  SVQVEILDNPSILEPDLIEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGL
A0A6J1DQP4 Ribonuclease H2.1e-3491.46Show/hide
Query:  SVQVEILDNPSILEPDLIEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGL
        SV VEILDNPSILEPDL+E+GAPESSWMDPI DFIRGNSPQDPKERRKLARR AR VVRDGALYRRGFSLPLL+CLTPEEGL
Subjt:  SVQVEILDNPSILEPDLIEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGL
A0A6J1DW30 Ribonuclease H9.2e-3591.46Show/hide
Query:  SVQVEILDNPSILEPDLIEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGL
        SV VEILDNPSILEPDL+EIGAPESSWM+PI DFI+GNSPQDPKERRKLARRAARFV+RDGALYRRGFSLPLL+CLTPEEGL
Subjt:  SVQVEILDNPSILEPDLIEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGL
A0A6J1DYS0 Ribonuclease H2.1e-3493.9Show/hide
Query:  SVQVEILDNPSILEPDLIEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGL
        SV VEILDNPSI EPDL+EIGAPESSWMDPIADFIRGNSPQDPKERRKLA R ARFVVRDGALYRRGFSLPLLRCLTPEEGL
Subjt:  SVQVEILDNPSILEPDLIEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGL
A0A6J1E0M8 uncharacterized protein LOC1110253192.1e-3495.12Show/hide
Query:  SVQVEILDNPSILEPDLIEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGL
        SV VEILDNPSILEPDL+EIGAPESSWMD IADFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLT EEGL
Subjt:  SVQVEILDNPSILEPDLIEIGAPESSWMDPIADFIRGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGGTGGGGTCCCTTGTTCAAGTCCAGGAGTCAGCATTTAAAAGAACACTCATCTACTCCCCTAAAGTCGGGGAGGAGTGAATTCCATCTTGTGAAGTTATGTTC
CCAGCTCCCCACTCGGTCTCGTCCCCAAAATGGTAGGAATATTGAGTCGGCAACTCGGGCCACTCTCACCCATACAGATCAAAGGGCGAGCCGATACCCTCACTCGCATG
TCTCCACACGAATGACCTGGATCGAGTCGTCTGTAACCTTTACAGAGTGGGCCGTATCCATAGTGTTGCCAGGACAAAGTACCCAGCCTTATCCATATACTATAGACCCT
TTAGATCTTGGTGTTGGCGTTGCAGATTTTGGCGTGGGTAGTGGGAGAACAAAACAGTCATTGAAGCTTATCGGAGGAACGCGCTGTGTCGTCAGTTATAAGCTGCCGTC
GCAGATCTGCTCGTGGGTAGACATTGTGCGCCGTTCCATTAACAGGATTAAGAGTCATCGCCGTTGCCTGTTTAGATCCATCGTTCGTGGGTCTTACTCGAAACCGATGC
ACCCAAGAGCTGCAAGGAGTTGCGCCACTACTCGACGCCGGCCGCTGCTAAGTCGTGGTTCTCAGACTACTCTGTGCGCCGCTGCTACTGGTTCGATGGAGGGAGGGGGA
CGTCGTGCTGCCATGGACCGACGAAAGAAGAGCAGGAGATGTTGCCACCGAACCAAACACATTGCCGTTGGTGCTGCAGTCGTTGCCGCTGCAGCTGGTCGCCTGAGGAG
TCCGCCCAAGTGTTTAGGTCGGTCCGGAGACCGAGTTCGAGCTACAATCTGGAACACACTGTTGTGCATATCCTTGCATAAACATGTGCAGGTCCGCCCAAGTGTTCAGG
TCGAGATCCTAGATAATCCCTCGATCTTAGAGCCAGATCTGATAGAGATCGGCGCTCCAGAATCCTCATGGATGGACCCGATCGCGGACTTCATTAGGGGCAACTCACCA
CAAGATCCCAAGGAGCGCAGAAAGTTGGCAAGGCGGGCAGCTCGGTTCGTGGTCCGAGATGGGGCATTGTACCGACGTGGCTTTTCCCTGCCTCTATTGAGATGCCTAAC
CCCTGAAGAGGGCCTGGTCCAAACGCATGTGGGTGCCCTTGATCCGGCCTGGGAGGGCCCATTTGAGATCAAGGGCATAGTCCGACCTGGGACGTACATATTGGCCGATC
TGAAAGGAGATGTCCTCGCGCACCCGTGGAACGCGGAACACCTGAAGCGTTATTATCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGGTGGGGTCCCTTGTTCAAGTCCAGGAGTCAGCATTTAAAAGAACACTCATCTACTCCCCTAAAGTCGGGGAGGAGTGAATTCCATCTTGTGAAGTTATGTTC
CCAGCTCCCCACTCGGTCTCGTCCCCAAAATGGTAGGAATATTGAGTCGGCAACTCGGGCCACTCTCACCCATACAGATCAAAGGGCGAGCCGATACCCTCACTCGCATG
TCTCCACACGAATGACCTGGATCGAGTCGTCTGTAACCTTTACAGAGTGGGCCGTATCCATAGTGTTGCCAGGACAAAGTACCCAGCCTTATCCATATACTATAGACCCT
TTAGATCTTGGTGTTGGCGTTGCAGATTTTGGCGTGGGTAGTGGGAGAACAAAACAGTCATTGAAGCTTATCGGAGGAACGCGCTGTGTCGTCAGTTATAAGCTGCCGTC
GCAGATCTGCTCGTGGGTAGACATTGTGCGCCGTTCCATTAACAGGATTAAGAGTCATCGCCGTTGCCTGTTTAGATCCATCGTTCGTGGGTCTTACTCGAAACCGATGC
ACCCAAGAGCTGCAAGGAGTTGCGCCACTACTCGACGCCGGCCGCTGCTAAGTCGTGGTTCTCAGACTACTCTGTGCGCCGCTGCTACTGGTTCGATGGAGGGAGGGGGA
CGTCGTGCTGCCATGGACCGACGAAAGAAGAGCAGGAGATGTTGCCACCGAACCAAACACATTGCCGTTGGTGCTGCAGTCGTTGCCGCTGCAGCTGGTCGCCTGAGGAG
TCCGCCCAAGTGTTTAGGTCGGTCCGGAGACCGAGTTCGAGCTACAATCTGGAACACACTGTTGTGCATATCCTTGCATAAACATGTGCAGGTCCGCCCAAGTGTTCAGG
TCGAGATCCTAGATAATCCCTCGATCTTAGAGCCAGATCTGATAGAGATCGGCGCTCCAGAATCCTCATGGATGGACCCGATCGCGGACTTCATTAGGGGCAACTCACCA
CAAGATCCCAAGGAGCGCAGAAAGTTGGCAAGGCGGGCAGCTCGGTTCGTGGTCCGAGATGGGGCATTGTACCGACGTGGCTTTTCCCTGCCTCTATTGAGATGCCTAAC
CCCTGAAGAGGGCCTGGTCCAAACGCATGTGGGTGCCCTTGATCCGGCCTGGGAGGGCCCATTTGAGATCAAGGGCATAGTCCGACCTGGGACGTACATATTGGCCGATC
TGAAAGGAGATGTCCTCGCGCACCCGTGGAACGCGGAACACCTGAAGCGTTATTATCCTTGA
Protein sequenceShow/hide protein sequence
MRGWGPLFKSRSQHLKEHSSTPLKSGRSEFHLVKLCSQLPTRSRPQNGRNIESATRATLTHTDQRASRYPHSHVSTRMTWIESSVTFTEWAVSIVLPGQSTQPYPYTIDP
LDLGVGVADFGVGSGRTKQSLKLIGGTRCVVSYKLPSQICSWVDIVRRSINRIKSHRRCLFRSIVRGSYSKPMHPRAARSCATTRRRPLLSRGSQTTLCAAATGSMEGGG
RRAAMDRRKKSRRCCHRTKHIAVGAAVVAAAAGRLRSPPKCLGRSGDRVRATIWNTLLCISLHKHVQVRPSVQVEILDNPSILEPDLIEIGAPESSWMDPIADFIRGNSP
QDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLVQTHVGALDPAWEGPFEIKGIVRPGTYILADLKGDVLAHPWNAEHLKRYYP