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Moc07g18780 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g18780
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr7:13518870..13519837
RNA-Seq ExpressionMoc07g18780
SyntenyMoc07g18780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG69944.1 hypothetical protein EZV62_004879 [Acer yangbiense]5.5e-1245.98Show/hide
Query:  VVEQFRKLHPPSFDGTSTYPIVAEEWTEDIENAFDLMQCNDRQKMA----------FISPTTTHNKEAEFIKLEQGRLPLIEYEKKF
        VVEQFR+LHPPSF+GT T P+ AEEW  ++E  F  + C D QK+A          +      + KE+EF++L QG + L+EYE+KF
Subjt:  VVEQFRKLHPPSFDGTSTYPIVAEEWTEDIENAFDLMQCNDRQKMA----------FISPTTTHNKEAEFIKLEQGRLPLIEYEKKF

XP_022155935.1 uncharacterized protein LOC111022935 [Momordica charantia]4.3e-1755.24Show/hide
Query:  NAPANDGVNHVVEQFRKLHPPSFD---GTSTYPIVAEEW---TEDIENAFDLMQCNDRQKMAFISP----TTTHNKEAEFIKLEQGRLPLIEYEKKFEEL
        NAPAND VN VVEQFR LHPPSFD    T    I   +W   T    N  +    +DR K  F       T   NKEA+FIKLEQG+L LIEYEKKFEEL
Subjt:  NAPANDGVNHVVEQFRKLHPPSFD---GTSTYPIVAEEW---TEDIENAFDLMQCNDRQKMAFISP----TTTHNKEAEFIKLEQGRLPLIEYEKKFEEL

Query:  SHYTP
        SHY P
Subjt:  SHYTP

XP_022158216.1 uncharacterized protein LOC111024753 [Momordica charantia]1.4e-2866.99Show/hide
Query:  NAPANDGVNHVVEQFRKLHPPSFDGTSTYPIVAEEWTEDIENAFDLMQCNDRQK--------MAFISPTTTHNKEAEFIKLEQGRLPLIEYEKKFEELSH
        NA AND VN + +QFRKLHPPSFDG ST  IVAEEW E+IEN FD ++CNDRQ+          F  PT   NKEAEFIKLEQGRLP IEYEKKFEELSH
Subjt:  NAPANDGVNHVVEQFRKLHPPSFDGTSTYPIVAEEWTEDIENAFDLMQCNDRQK--------MAFISPTTTHNKEAEFIKLEQGRLPLIEYEKKFEELSH

Query:  YTP
          P
Subjt:  YTP

XP_022851618.1 uncharacterized protein LOC111373334 [Olea europaea var. sylvestris]1.6e-1127.67Show/hide
Query:  DGVNHVVEQFRKLHPPSFDGTSTYPIVAEEWTEDIENAFDLMQCNDRQKM---------------AFISPTTTH--------------------------
        +  N +VEQFR+  PP+F+   T P+ AEEW   +E  F  + C D QK+                F+S T T                           
Subjt:  DGVNHVVEQFRKLHPPSFDGTSTYPIVAEEWTEDIENAFDLMQCNDRQKM---------------AFISPTTTH--------------------------

Query:  NKEAEFIKLEQGRLPLIEYEKKFEELSHYTPIWWTLIGGKQDNLKRFKTRTK----------EACCYLQIDDLCRGVANSSDLVTEFGQREVTFQRWWFK
         KE EF++L+QG++ L++YE+KFE+LS Y      L+  +Q   +RF+ R +          E   Y+Q+    + +AN  +L       + T +   F 
Subjt:  NKEAEFIKLEQGRLPLIEYEKKFEELSHYTPIWWTLIGGKQDNLKRFKTRTK----------EACCYLQIDDLCRGVANSSDLVTEFGQREVTFQRWWFK

Query:  KKVPWN
         K  WN
Subjt:  KKVPWN

XP_022855142.1 uncharacterized protein LOC111376413 [Olea europaea var. sylvestris]1.6e-1134.16Show/hide
Query:  APAN-----DGVNHVVEQFRKLHPPSFDGTSTYPIVAEEWTEDIENAFDLMQCNDRQKMA-------------FISPTTT--------------------
        AP+N     + V+ +VEQFR+  PPSFDG    P  AEEW   +E  F+ M C+D QK++             + S T T                    
Subjt:  APAN-----DGVNHVVEQFRKLHPPSFDGTSTYPIVAEEWTEDIENAFDLMQCNDRQKMA-------------FISPTTT--------------------

Query:  --------HNKEAEFIKLEQGRLPLIEYEKKFEELSHYTPIWWTLIGGKQDNLKRFKTRTK
                  KE EF++L QG LPL EYE+KFE+LS Y P    ++  +    KRFK   K
Subjt:  --------HNKEAEFIKLEQGRLPLIEYEKKFEELSHYTPIWWTLIGGKQDNLKRFKTRTK

TrEMBL top hitse value%identityAlignment
A0A2N9FT08 Uncharacterized protein2.6e-1232.92Show/hide
Query:  QFRKLHPPSFDGTSTYPIVAEEWTEDIENAFDLMQCNDRQKMAFIS-----------PTTT-HNKEAEFIKLEQGRLPLIEYEKKFEELSHYTPIWWTLI
        +F++L PPSF+G ST P+VAE+W  ++E AF +++C + +K+ + +           PT+    KE EFIKLEQG + + +YE +F  L+ + P   TL+
Subjt:  QFRKLHPPSFDGTSTYPIVAEEWTEDIENAFDLMQCNDRQKMAFIS-----------PTTT-HNKEAEFIKLEQGRLPLIEYEKKFEELSHYTPIWWTLI

Query:  GGKQDNLKRF----KTRTKEACCYLQIDDLCRGVANSSDLVTEFGQREVTFQRWWFKKKVP
          +    +RF    + R K +    ++    R V N + L+ E G  E    R   +KK P
Subjt:  GGKQDNLKRF----KTRTKEACCYLQIDDLCRGVANSSDLVTEFGQREVTFQRWWFKKKVP

A0A2N9I1S3 Reverse transcriptase2.6e-1232.92Show/hide
Query:  QFRKLHPPSFDGTSTYPIVAEEWTEDIENAFDLMQCNDRQKMAFIS-----------PTTT-HNKEAEFIKLEQGRLPLIEYEKKFEELSHYTPIWWTLI
        +F++L PPSF+G ST P+VAE+W  ++E AF +++C + +K+ + +           PT+    KE EFIKLEQG + + +YE +F  L+ + P   TL+
Subjt:  QFRKLHPPSFDGTSTYPIVAEEWTEDIENAFDLMQCNDRQKMAFIS-----------PTTT-HNKEAEFIKLEQGRLPLIEYEKKFEELSHYTPIWWTLI

Query:  GGKQDNLKRF----KTRTKEACCYLQIDDLCRGVANSSDLVTEFGQREVTFQRWWFKKKVP
          +    +RF    + R K +    ++    R V N + L+ E G  E    R   +KK P
Subjt:  GGKQDNLKRF----KTRTKEACCYLQIDDLCRGVANSSDLVTEFGQREVTFQRWWFKKKVP

A0A5C7IMB1 Retrotrans_gag domain-containing protein2.6e-1245.98Show/hide
Query:  VVEQFRKLHPPSFDGTSTYPIVAEEWTEDIENAFDLMQCNDRQKMA----------FISPTTTHNKEAEFIKLEQGRLPLIEYEKKF
        VVEQFR+LHPPSF+GT T P+ AEEW  ++E  F  + C D QK+A          +      + KE+EF++L QG + L+EYE+KF
Subjt:  VVEQFRKLHPPSFDGTSTYPIVAEEWTEDIENAFDLMQCNDRQKMA----------FISPTTTHNKEAEFIKLEQGRLPLIEYEKKF

A0A6J1DNX0 uncharacterized protein LOC1110229352.1e-1755.24Show/hide
Query:  NAPANDGVNHVVEQFRKLHPPSFD---GTSTYPIVAEEW---TEDIENAFDLMQCNDRQKMAFISP----TTTHNKEAEFIKLEQGRLPLIEYEKKFEEL
        NAPAND VN VVEQFR LHPPSFD    T    I   +W   T    N  +    +DR K  F       T   NKEA+FIKLEQG+L LIEYEKKFEEL
Subjt:  NAPANDGVNHVVEQFRKLHPPSFD---GTSTYPIVAEEW---TEDIENAFDLMQCNDRQKMAFISP----TTTHNKEAEFIKLEQGRLPLIEYEKKFEEL

Query:  SHYTP
        SHY P
Subjt:  SHYTP

A0A6J1E0B5 uncharacterized protein LOC1110247536.9e-2966.99Show/hide
Query:  NAPANDGVNHVVEQFRKLHPPSFDGTSTYPIVAEEWTEDIENAFDLMQCNDRQK--------MAFISPTTTHNKEAEFIKLEQGRLPLIEYEKKFEELSH
        NA AND VN + +QFRKLHPPSFDG ST  IVAEEW E+IEN FD ++CNDRQ+          F  PT   NKEAEFIKLEQGRLP IEYEKKFEELSH
Subjt:  NAPANDGVNHVVEQFRKLHPPSFDGTSTYPIVAEEWTEDIENAFDLMQCNDRQK--------MAFISPTTTHNKEAEFIKLEQGRLPLIEYEKKFEELSH

Query:  YTP
          P
Subjt:  YTP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGTATTAGAAAATACGGATTGTTACAGTTGGAATGCTCCAGCCAATGATGGAGTCAATCATGTGGTGGAACAGTTCAGAAAGCTTCATCCGCCCTCTTTTGATGG
TACAAGCACATATCCAATCGTTGCTGAAGAATGGACTGAGGACATTGAGAATGCTTTTGACCTTATGCAATGCAATGATCGTCAGAAAATGGCTTTTATTTCCCCGACTA
CCACACATAACAAGGAGGCAGAGTTTATCAAGTTAGAGCAAGGAAGACTGCCCCTGATAGAGTATGAAAAGAAGTTCGAAGAGCTTTCTCACTACACCCCCATTTGGTGG
ACACTGATTGGAGGAAAGCAAGACAATTTGAAGAGGTTTAAGACCAGAACTAAGGAAGCATGTTGCTACCTTCAGATTGATGACCTATGCCGAGGTGTTGCAAACAGCTC
AGATCTTGTCACAGAATTTGGACAACGCGAAGTCACTTTCCAAAGATGGTGGTTCAAAAAGAAAGTTCCATGGAATAGAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTGTATTAGAAAATACGGATTGTTACAGTTGGAATGCTCCAGCCAATGATGGAGTCAATCATGTGGTGGAACAGTTCAGAAAGCTTCATCCGCCCTCTTTTGATGG
TACAAGCACATATCCAATCGTTGCTGAAGAATGGACTGAGGACATTGAGAATGCTTTTGACCTTATGCAATGCAATGATCGTCAGAAAATGGCTTTTATTTCCCCGACTA
CCACACATAACAAGGAGGCAGAGTTTATCAAGTTAGAGCAAGGAAGACTGCCCCTGATAGAGTATGAAAAGAAGTTCGAAGAGCTTTCTCACTACACCCCCATTTGGTGG
ACACTGATTGGAGGAAAGCAAGACAATTTGAAGAGGTTTAAGACCAGAACTAAGGAAGCATGTTGCTACCTTCAGATTGATGACCTATGCCGAGGTGTTGCAAACAGCTC
AGATCTTGTCACAGAATTTGGACAACGCGAAGTCACTTTCCAAAGATGGTGGTTCAAAAAGAAAGTTCCATGGAATAGAGTTTGA
Protein sequenceShow/hide protein sequence
MTVLENTDCYSWNAPANDGVNHVVEQFRKLHPPSFDGTSTYPIVAEEWTEDIENAFDLMQCNDRQKMAFISPTTTHNKEAEFIKLEQGRLPLIEYEKKFEELSHYTPIWW
TLIGGKQDNLKRFKTRTKEACCYLQIDDLCRGVANSSDLVTEFGQREVTFQRWWFKKKVPWNRV