CuGenDBv2

Gene ID	Moc07g18940
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ribonuclease H
Genome location	chr7:13633663..13634179
RNA-Seq Expression	Moc07g18940
Synteny	Moc07g18940
Gene Ontology terms	GO:0006310 - DNA recombination (biological process) GO:0015074 - DNA integration (biological process) GO:0071897 - DNA biosynthetic process (biological process) GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process) GO:0005634 - nucleus (cellular component) GO:0016020 - membrane (cellular component) GO:0030430 - host cell cytoplasm (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003887 - DNA-directed DNA polymerase activity (molecular function) GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function) GO:0016491 - oxidoreductase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022143495.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]

4.1e-48

89.42

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Query:  MFNLELNTDVHPIKVGRRDVPASCISIEEEPDGNPWFYDIKQYIKSKEYPPNASENDKRTLCKLAMKFFLNGEILYKRNHDMVFLTCVEGRDANRIMEEI
        MFNLELN DV PIKVGRRDVPASC+SIEEEPDGNPWF+DIKQYI SKEYPPNASENDKRT  KLAMKFFLNGEILYKRNHDMV L CVEGRDANRIMEE+
Subjt:  MFNLELNTDVHPIKVGRRDVPASCISIEEEPDGNPWFYDIKQYIKSKEYPPNASENDKRTLCKLAMKFFLNGEILYKRNHDMVFLTCVEGRDANRIMEEI

Query:  HEGL
        HEG+
Subjt:  HEGL

XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]

1.6e-49

85.09

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Query:  MFNLELNTDVHPIKVGRRDVPASCISIEEEPDGNPWFYDIKQYIKSKEYPPNASENDKRTLCKLAMKFFLNGEILYKRNHDMVFLTCVEGRDANRIMEEI
        MFNLELN DV PIKVGRRDVPASC+SIEEEPDG PWF+DIKQYIKSKEYPPNASENDKRTL KLA+KFFLNGEILYKRNHDMV L CVEGRDANRIMEEI
Subjt:  MFNLELNTDVHPIKVGRRDVPASCISIEEEPDGNPWFYDIKQYIKSKEYPPNASENDKRTLCKLAMKFFLNGEILYKRNHDMVFLTCVEGRDANRIMEEI

Query:  HEGLIGLSLCGAWM
        HEG+ G    G  M
Subjt:  HEGLIGLSLCGAWM

XP_022157796.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]

1.3e-49

85.09

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Query:  MFNLELNTDVHPIKVGRRDVPASCISIEEEPDGNPWFYDIKQYIKSKEYPPNASENDKRTLCKLAMKFFLNGEILYKRNHDMVFLTCVEGRDANRIMEEI
        MFNLELN DV PIKVGRRDVPASC+SIEEEPDGNPWF+DIKQYIKSKEY PNASENDKRTL KLAMKFFLNGEILYKRNHDMV L CVEGRDANRIMEE+
Subjt:  MFNLELNTDVHPIKVGRRDVPASCISIEEEPDGNPWFYDIKQYIKSKEYPPNASENDKRTLCKLAMKFFLNGEILYKRNHDMVFLTCVEGRDANRIMEEI

Query:  HEGLIGLSLCGAWM
        HEG+ G    G  M
Subjt:  HEGLIGLSLCGAWM

XP_022157838.1 uncharacterized protein LOC111024452 [Momordica charantia]

4.3e-50

85.09

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Query:  MFNLELNTDVHPIKVGRRDVPASCISIEEEPDGNPWFYDIKQYIKSKEYPPNASENDKRTLCKLAMKFFLNGEILYKRNHDMVFLTCVEGRDANRIMEEI
        MFNLELN DV PIKVGRRD+PASC+SIEEEPDGNPWF+DIKQYIKSKEYPPNASENDKRTL KLAMKFFLNGEILYKRNHDMV L CVEGR+ANRIMEEI
Subjt:  MFNLELNTDVHPIKVGRRDVPASCISIEEEPDGNPWFYDIKQYIKSKEYPPNASENDKRTLCKLAMKFFLNGEILYKRNHDMVFLTCVEGRDANRIMEEI

Query:  HEGLIGLSLCGAWM
        HEG+ G    G  M
Subjt:  HEGLIGLSLCGAWM

XP_022158986.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]

3.7e-49

84.21

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Query:  MFNLELNTDVHPIKVGRRDVPASCISIEEEPDGNPWFYDIKQYIKSKEYPPNASENDKRTLCKLAMKFFLNGEILYKRNHDMVFLTCVEGRDANRIMEEI
        MFNLELN DV PIKVGRRDVPASC+SIEEEPDGNPWF++IK YIKSKEYPPNASENDKRTL KLAMKFFLNGEILYKRNHDMV L CVEGRDANRIMEE+
Subjt:  MFNLELNTDVHPIKVGRRDVPASCISIEEEPDGNPWFYDIKQYIKSKEYPPNASENDKRTLCKLAMKFFLNGEILYKRNHDMVFLTCVEGRDANRIMEEI

Query:  HEGLIGLSLCGAWM
        HEG+ G    G  M
Subjt:  HEGLIGLSLCGAWM

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CNY7 Ribonuclease H

2.0e-48

89.42

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Query:  MFNLELNTDVHPIKVGRRDVPASCISIEEEPDGNPWFYDIKQYIKSKEYPPNASENDKRTLCKLAMKFFLNGEILYKRNHDMVFLTCVEGRDANRIMEEI
        MFNLELN DV PIKVGRRDVPASC+SIEEEPDGNPWF+DIKQYI SKEYPPNASENDKRT  KLAMKFFLNGEILYKRNHDMV L CVEGRDANRIMEE+
Subjt:  MFNLELNTDVHPIKVGRRDVPASCISIEEEPDGNPWFYDIKQYIKSKEYPPNASENDKRTLCKLAMKFFLNGEILYKRNHDMVFLTCVEGRDANRIMEEI

Query:  HEGL
        HEG+
Subjt:  HEGL

A0A6J1D099 Ribonuclease H

8.0e-50

85.09

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Query:  MFNLELNTDVHPIKVGRRDVPASCISIEEEPDGNPWFYDIKQYIKSKEYPPNASENDKRTLCKLAMKFFLNGEILYKRNHDMVFLTCVEGRDANRIMEEI
        MFNLELN DV PIKVGRRDVPASC+SIEEEPDG PWF+DIKQYIKSKEYPPNASENDKRTL KLA+KFFLNGEILYKRNHDMV L CVEGRDANRIMEEI
Subjt:  MFNLELNTDVHPIKVGRRDVPASCISIEEEPDGNPWFYDIKQYIKSKEYPPNASENDKRTLCKLAMKFFLNGEILYKRNHDMVFLTCVEGRDANRIMEEI

Query:  HEGLIGLSLCGAWM
        HEG+ G    G  M
Subjt:  HEGLIGLSLCGAWM

A0A6J1DUG0 Ribonuclease H

2.1e-50

85.09

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Query:  MFNLELNTDVHPIKVGRRDVPASCISIEEEPDGNPWFYDIKQYIKSKEYPPNASENDKRTLCKLAMKFFLNGEILYKRNHDMVFLTCVEGRDANRIMEEI
        MFNLELN DV PIKVGRRD+PASC+SIEEEPDGNPWF+DIKQYIKSKEYPPNASENDKRTL KLAMKFFLNGEILYKRNHDMV L CVEGR+ANRIMEEI
Subjt:  MFNLELNTDVHPIKVGRRDVPASCISIEEEPDGNPWFYDIKQYIKSKEYPPNASENDKRTLCKLAMKFFLNGEILYKRNHDMVFLTCVEGRDANRIMEEI

Query:  HEGLIGLSLCGAWM
        HEG+ G    G  M
Subjt:  HEGLIGLSLCGAWM

A0A6J1DZ90 Ribonuclease H

6.1e-50

85.09

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Query:  MFNLELNTDVHPIKVGRRDVPASCISIEEEPDGNPWFYDIKQYIKSKEYPPNASENDKRTLCKLAMKFFLNGEILYKRNHDMVFLTCVEGRDANRIMEEI
        MFNLELN DV PIKVGRRDVPASC+SIEEEPDGNPWF+DIKQYIKSKEY PNASENDKRTL KLAMKFFLNGEILYKRNHDMV L CVEGRDANRIMEE+
Subjt:  MFNLELNTDVHPIKVGRRDVPASCISIEEEPDGNPWFYDIKQYIKSKEYPPNASENDKRTLCKLAMKFFLNGEILYKRNHDMVFLTCVEGRDANRIMEEI

Query:  HEGLIGLSLCGAWM
        HEG+ G    G  M
Subjt:  HEGLIGLSLCGAWM

A0A6J1E2J7 Ribonuclease H

1.8e-49

84.21

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Query:  MFNLELNTDVHPIKVGRRDVPASCISIEEEPDGNPWFYDIKQYIKSKEYPPNASENDKRTLCKLAMKFFLNGEILYKRNHDMVFLTCVEGRDANRIMEEI
        MFNLELN DV PIKVGRRDVPASC+SIEEEPDGNPWF++IK YIKSKEYPPNASENDKRTL KLAMKFFLNGEILYKRNHDMV L CVEGRDANRIMEE+
Subjt:  MFNLELNTDVHPIKVGRRDVPASCISIEEEPDGNPWFYDIKQYIKSKEYPPNASENDKRTLCKLAMKFFLNGEILYKRNHDMVFLTCVEGRDANRIMEEI

Query:  HEGLIGLSLCGAWM
        HEG+ G    G  M
Subjt:  HEGLIGLSLCGAWM

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGTTCAATTTAGAACTTAATACAGATGTCCATCCGATTAAAGTTGGGAGGAGAGATGTCCCAGCTTCTTGTATAAGCATTGAGGAAGAACCCGACGGTAACCCC
TGGTTTTATGACATCAAGCAGTATATCAAGAGTAAAGAATATCCACCAAATGCTTCAGAAAATGATAAGCGCACCCTCTGCAAGTTGGCAATGAAGTTTTTCTTA
AACGGAGAGATACTGTACAAGAGAAACCATGACATGGTTTTCCTAACGTGCGTTGAAGGAAGAGATGCCAATAGGATTATGGAGGAAATTCATGAAGGACTCATT
GGCCTTTCTCTATGTGGGGCATGGATGTGA

mRNA sequence

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Protein sequence

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MFNLELNTDVHPIKVGRRDVPASCISIEEEPDGNPWFYDIKQYIKSKEYPPNASENDKRTLCKLAMKFFLNGEILYKRNHDMVFLTCVEGRDANRIMEEIHEGLI
GLSLCGAWM

Moc07g18940 (gene) of Bitter gourd (OHB3-1) v2 genome