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Moc07g18980 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g18980
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111020110
Genome locationchr7:13645647..13646312
RNA-Seq ExpressionMoc07g18980
SyntenyMoc07g18980
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152366.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111020110 [Momordica charantia]2.8e-9784.19Show/hide
Query:  HTSLPTSSTQAPNATSIPFPPLENFQHHMGSDSRLAAVRGGNPLQTFECPPSQAPTQHPIMSPHGYVNFQQLPTFNIPQNSEFRAENPQQLPPMIN----
        HTSLPTSSTQAPNATSIPFPPLENFQHHM SDSRLAAVRGGNPLQTFECPPSQAPTQHPIMSPHGYVNFQQLPTFNIPQ+SEFRAENPQQLPPMIN    
Subjt:  HTSLPTSSTQAPNATSIPFPPLENFQHHMGSDSRLAAVRGGNPLQTFECPPSQAPTQHPIMSPHGYVNFQQLPTFNIPQNSEFRAENPQQLPPMIN----

Query:  --------------------PASVHSYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVSPPPQLPFLERGPQASQLNPNISSTFNMGQLKPLEPPRM
                            PASVH YGMPNPSTLFPSL PYYGMGHWVPP NYGMISPRV PPPQL FLERGPQA QLNPNI STFNMGQLKPLEPPRM
Subjt:  --------------------PASVHSYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVSPPPQLPFLERGPQASQLNPNISSTFNMGQLKPLEPPRM

Query:  PTPTNMPMDAGDEHG
        PTPTNMPMD GDEHG
Subjt:  PTPTNMPMDAGDEHG

XP_022156936.1 uncharacterized protein LOC111023763 [Momordica charantia]2.1e-6076.77Show/hide
Query:  MSPHGYVNFQQLPTFNIPQNSEFRAENPQQLPPMINP------------------------ASVHSYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPR
        M+PHGYVNFQQLPT NIPQNSEFRAENPQQLPPMINP                        ASVH YGMPNPSTLFPS PPYYGMGHWVPPHNYGMISPR
Subjt:  MSPHGYVNFQQLPTFNIPQNSEFRAENPQQLPPMINP------------------------ASVHSYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPR

Query:  VSPPPQLPFLERGPQASQLNPNISSTFNMGQLKPLEPPRMPTPTNMPMDAGDEHG
        V PPPQLPFLERGPQ  QLNPN  STFNMG LKPLEPPRMP PTNMPMDAG EHG
Subjt:  VSPPPQLPFLERGPQASQLNPNISSTFNMGQLKPLEPPRMPTPTNMPMDAGDEHG

XP_022157800.1 protein PAF1 homolog [Momordica charantia]3.1e-7275.4Show/hide
Query:  MGSDSRLAAVRGGNPLQTFECPPSQAPTQHPIMSPHGYVNFQQLPTFNIPQNSEFRAENPQQLPPMIN------------------------PASVHSYG
        M  D RLAAVRGGNPLQTFE PPSQAPTQHP+MSPHGYVNFQQLP  NIPQNSEFRAE+PQQ PPMIN                        PASVH YG
Subjt:  MGSDSRLAAVRGGNPLQTFECPPSQAPTQHPIMSPHGYVNFQQLPTFNIPQNSEFRAENPQQLPPMIN------------------------PASVHSYG

Query:  MPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVSPPPQLPFLERGPQASQLNPNISSTFNMGQLKPLEPPRMPTPTNMPMDAGDEHG
        MPNPSTLFPSLPPYY MG+WVPP NYGMISPRV PPPQLPFLERGPQA QLNPNI STFNMGQLKPLEPP MP P N+PMD G EHG
Subjt:  MPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVSPPPQLPFLERGPQASQLNPNISSTFNMGQLKPLEPPRMPTPTNMPMDAGDEHG

XP_022158357.1 uncharacterized protein LOC111024860 [Momordica charantia]1.6e-10083.71Show/hide
Query:  MASSSQHTSLPTSSTQAPNATSIPFPPLENFQHHMGSDSRLAAVRGGNPLQTFECPPSQAPTQHPIMSPHGYVNFQQLPTFNIPQNSEFRAENPQQLPPM
        MASSSQHTSLPTSST APNATSIPFPPLENFQHHM SDSRLAAVRGGNPLQTFECPPSQAPTQHPIMSPHGYVNFQQLPT NIPQNSEFRAENPQQLPPM
Subjt:  MASSSQHTSLPTSSTQAPNATSIPFPPLENFQHHMGSDSRLAAVRGGNPLQTFECPPSQAPTQHPIMSPHGYVNFQQLPTFNIPQNSEFRAENPQQLPPM

Query:  IN------------------------PASVHSYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVSPPPQLPFLERGPQASQLNPNISSTFNMGQLKP
        IN                        PASVH YGMPNPSTLFPSLPPYYGMGHW+PP NYGMISP+V PPPQLPFLERGPQA QL+PNI ST+NMGQLKP
Subjt:  IN------------------------PASVHSYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVSPPPQLPFLERGPQASQLNPNISSTFNMGQLKP

Query:  LEPPRMPTPTNMPMDAGDEHG
        LEPPRMPTPTNMPMDAGDEHG
Subjt:  LEPPRMPTPTNMPMDAGDEHG

XP_022158979.1 uncharacterized protein LOC111025424 [Momordica charantia]2.0e-7481.32Show/hide
Query:  MASSSQHTSLPTSSTQAPNATSIPFPPLENFQHHMGSDSRLAAVRGGNPLQTFECPPSQAPTQHPIMSPHGYVNFQQLPTFNIPQNSEFRAENPQQLPPM
        MASSSQHTSLPTSSTQAPNATSIPFPPLENFQHHM SDSRLAAVRGGNPLQTFECPP QA TQHPIMSPHGYVNFQQLPT NIPQNSEFRAENPQQL PM
Subjt:  MASSSQHTSLPTSSTQAPNATSIPFPPLENFQHHMGSDSRLAAVRGGNPLQTFECPPSQAPTQHPIMSPHGYVNFQQLPTFNIPQNSEFRAENPQQLPPM

Query:  IN------------------------PASVHSYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVSPPPQLPFLERGPQA
        IN                        PASVH YGMPNPSTLFPSLPPYYGMGHWV P NYGMISPRV PPPQL FLERGPQA
Subjt:  IN------------------------PASVHSYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVSPPPQLPFLERGPQA

TrEMBL top hitse value%identityAlignment
A0A6J1DHH9 LOW QUALITY PROTEIN: uncharacterized protein LOC1110201101.4e-9784.19Show/hide
Query:  HTSLPTSSTQAPNATSIPFPPLENFQHHMGSDSRLAAVRGGNPLQTFECPPSQAPTQHPIMSPHGYVNFQQLPTFNIPQNSEFRAENPQQLPPMIN----
        HTSLPTSSTQAPNATSIPFPPLENFQHHM SDSRLAAVRGGNPLQTFECPPSQAPTQHPIMSPHGYVNFQQLPTFNIPQ+SEFRAENPQQLPPMIN    
Subjt:  HTSLPTSSTQAPNATSIPFPPLENFQHHMGSDSRLAAVRGGNPLQTFECPPSQAPTQHPIMSPHGYVNFQQLPTFNIPQNSEFRAENPQQLPPMIN----

Query:  --------------------PASVHSYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVSPPPQLPFLERGPQASQLNPNISSTFNMGQLKPLEPPRM
                            PASVH YGMPNPSTLFPSL PYYGMGHWVPP NYGMISPRV PPPQL FLERGPQA QLNPNI STFNMGQLKPLEPPRM
Subjt:  --------------------PASVHSYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVSPPPQLPFLERGPQASQLNPNISSTFNMGQLKPLEPPRM

Query:  PTPTNMPMDAGDEHG
        PTPTNMPMD GDEHG
Subjt:  PTPTNMPMDAGDEHG

A0A6J1DU32 protein PAF1 homolog1.5e-7275.4Show/hide
Query:  MGSDSRLAAVRGGNPLQTFECPPSQAPTQHPIMSPHGYVNFQQLPTFNIPQNSEFRAENPQQLPPMIN------------------------PASVHSYG
        M  D RLAAVRGGNPLQTFE PPSQAPTQHP+MSPHGYVNFQQLP  NIPQNSEFRAE+PQQ PPMIN                        PASVH YG
Subjt:  MGSDSRLAAVRGGNPLQTFECPPSQAPTQHPIMSPHGYVNFQQLPTFNIPQNSEFRAENPQQLPPMIN------------------------PASVHSYG

Query:  MPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVSPPPQLPFLERGPQASQLNPNISSTFNMGQLKPLEPPRMPTPTNMPMDAGDEHG
        MPNPSTLFPSLPPYY MG+WVPP NYGMISPRV PPPQLPFLERGPQA QLNPNI STFNMGQLKPLEPP MP P N+PMD G EHG
Subjt:  MPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVSPPPQLPFLERGPQASQLNPNISSTFNMGQLKPLEPPRMPTPTNMPMDAGDEHG

A0A6J1DWG3 uncharacterized protein LOC1110237631.0e-6076.77Show/hide
Query:  MSPHGYVNFQQLPTFNIPQNSEFRAENPQQLPPMINP------------------------ASVHSYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPR
        M+PHGYVNFQQLPT NIPQNSEFRAENPQQLPPMINP                        ASVH YGMPNPSTLFPS PPYYGMGHWVPPHNYGMISPR
Subjt:  MSPHGYVNFQQLPTFNIPQNSEFRAENPQQLPPMINP------------------------ASVHSYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPR

Query:  VSPPPQLPFLERGPQASQLNPNISSTFNMGQLKPLEPPRMPTPTNMPMDAGDEHG
        V PPPQLPFLERGPQ  QLNPN  STFNMG LKPLEPPRMP PTNMPMDAG EHG
Subjt:  VSPPPQLPFLERGPQASQLNPNISSTFNMGQLKPLEPPRMPTPTNMPMDAGDEHG

A0A6J1DX11 uncharacterized protein LOC1110248607.7e-10183.71Show/hide
Query:  MASSSQHTSLPTSSTQAPNATSIPFPPLENFQHHMGSDSRLAAVRGGNPLQTFECPPSQAPTQHPIMSPHGYVNFQQLPTFNIPQNSEFRAENPQQLPPM
        MASSSQHTSLPTSST APNATSIPFPPLENFQHHM SDSRLAAVRGGNPLQTFECPPSQAPTQHPIMSPHGYVNFQQLPT NIPQNSEFRAENPQQLPPM
Subjt:  MASSSQHTSLPTSSTQAPNATSIPFPPLENFQHHMGSDSRLAAVRGGNPLQTFECPPSQAPTQHPIMSPHGYVNFQQLPTFNIPQNSEFRAENPQQLPPM

Query:  IN------------------------PASVHSYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVSPPPQLPFLERGPQASQLNPNISSTFNMGQLKP
        IN                        PASVH YGMPNPSTLFPSLPPYYGMGHW+PP NYGMISP+V PPPQLPFLERGPQA QL+PNI ST+NMGQLKP
Subjt:  IN------------------------PASVHSYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVSPPPQLPFLERGPQASQLNPNISSTFNMGQLKP

Query:  LEPPRMPTPTNMPMDAGDEHG
        LEPPRMPTPTNMPMDAGDEHG
Subjt:  LEPPRMPTPTNMPMDAGDEHG

A0A6J1E110 uncharacterized protein LOC1110254249.5e-7581.32Show/hide
Query:  MASSSQHTSLPTSSTQAPNATSIPFPPLENFQHHMGSDSRLAAVRGGNPLQTFECPPSQAPTQHPIMSPHGYVNFQQLPTFNIPQNSEFRAENPQQLPPM
        MASSSQHTSLPTSSTQAPNATSIPFPPLENFQHHM SDSRLAAVRGGNPLQTFECPP QA TQHPIMSPHGYVNFQQLPT NIPQNSEFRAENPQQL PM
Subjt:  MASSSQHTSLPTSSTQAPNATSIPFPPLENFQHHMGSDSRLAAVRGGNPLQTFECPPSQAPTQHPIMSPHGYVNFQQLPTFNIPQNSEFRAENPQQLPPM

Query:  IN------------------------PASVHSYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVSPPPQLPFLERGPQA
        IN                        PASVH YGMPNPSTLFPSLPPYYGMGHWV P NYGMISPRV PPPQL FLERGPQA
Subjt:  IN------------------------PASVHSYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVSPPPQLPFLERGPQA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTCTTCTCAACATACTTCACTTCCTACCTCTTCTACTCAAGCTCCAAATGCCACAAGCATTCCTTTTCCACCATTGGAGAACTTCCAACACCACATG
GGTTCAGATTCTAGGCTAGCTGCTGTTAGGGGAGGAAACCCGCTTCAAACATTTGAATGTCCTCCATCCCAAGCTCCTACACAACATCCTATAATGAGCCCACAT
GGTTATGTTAATTTTCAGCAACTACCCACCTTTAATATACCTCAAAACAGTGAGTTTAGGGCTGAAAATCCTCAACAACTTCCTCCAATGATCAATCCGGCTAGT
GTTCATTCTTATGGAATGCCAAACCCATCTACTCTATTTCCTAGCCTTCCACCTTATTATGGAATGGGTCATTGGGTACCTCCACATAATTATGGTATGATTTCA
CCTAGAGTTTCCCCACCACCTCAACTTCCATTCCTAGAAAGAGGACCTCAAGCATCCCAATTGAACCCTAACATATCGAGTACCTTCAACATGGGACAACTAAAA
CCCTTAGAGCCTCCTAGGATGCCAACCCCAACCAATATGCCAATGGATGCAGGAGATGAGCATGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCTCTTCTCAACATACTTCACTTCCTACCTCTTCTACTCAAGCTCCAAATGCCACAAGCATTCCTTTTCCACCATTGGAGAACTTCCAACACCACATG
GGTTCAGATTCTAGGCTAGCTGCTGTTAGGGGAGGAAACCCGCTTCAAACATTTGAATGTCCTCCATCCCAAGCTCCTACACAACATCCTATAATGAGCCCACAT
GGTTATGTTAATTTTCAGCAACTACCCACCTTTAATATACCTCAAAACAGTGAGTTTAGGGCTGAAAATCCTCAACAACTTCCTCCAATGATCAATCCGGCTAGT
GTTCATTCTTATGGAATGCCAAACCCATCTACTCTATTTCCTAGCCTTCCACCTTATTATGGAATGGGTCATTGGGTACCTCCACATAATTATGGTATGATTTCA
CCTAGAGTTTCCCCACCACCTCAACTTCCATTCCTAGAAAGAGGACCTCAAGCATCCCAATTGAACCCTAACATATCGAGTACCTTCAACATGGGACAACTAAAA
CCCTTAGAGCCTCCTAGGATGCCAACCCCAACCAATATGCCAATGGATGCAGGAGATGAGCATGGATGA
Protein sequenceShow/hide protein sequence
MASSSQHTSLPTSSTQAPNATSIPFPPLENFQHHMGSDSRLAAVRGGNPLQTFECPPSQAPTQHPIMSPHGYVNFQQLPTFNIPQNSEFRAENPQQLPPMINPAS
VHSYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVSPPPQLPFLERGPQASQLNPNISSTFNMGQLKPLEPPRMPTPTNMPMDAGDEHG