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Moc07g19030 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g19030
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr7:13658577..13663543
RNA-Seq ExpressionMoc07g19030
SyntenyMoc07g19030
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]4.3e-1563.33Show/hide
Query:  QTLPDNHSSNLLAPVPVEPLQPPYPKWYDPHVRCDYHAGAVGHSTENCTSLKHEVQVLMR
        + LP    +N LAPVPV+P+QPPYP+WYD + RCDYHAGA+ HSTENCT LK+ VQ L++
Subjt:  QTLPDNHSSNLLAPVPVEPLQPPYPKWYDPHVRCDYHAGAVGHSTENCTSLKHEVQVLMR

XP_022153553.1 uncharacterized protein LOC111021029 [Momordica charantia]2.1e-7070.75Show/hide
Query:  MEVQNVELKKMRQDIDKIQGQITEIFNILKNI--VGGIFQPNNLVKPHNNSSPKVNSPPCQSIEGFPQHNSSHEAQLSKKGQQAPTICPVEFTFQDGQAS
        MEVQNVELKKMRQDID IQ Q+ +I N+LKNI  VGG  QPNNLV+P+NNSSP+V+ P CQS EGFPQH+SSH+AQLSKKGQQ PT C VEFTF+D Q  
Subjt:  MEVQNVELKKMRQDIDKIQGQITEIFNILKNI--VGGIFQPNNLVKPHNNSSPKVNSPPCQSIEGFPQHNSSHEAQLSKKGQQAPTICPVEFTFQDGQAS

Query:  KVIHSNILKGKEKNGKEKENVTNGNVEETAGKEYAQRWGEAMEQSPVPLINKEPHLETNRSSFKRKNKVQAVVSKRKRKYQQGFVAYSPSTVPINSLTLQ
        KV +S+ LK     G+EKENVT             QRWG+A+EQ PVPLINKEPH + N+SS KRKNKV AVVSKRKRKYQQGFVAYSPSTVPINS+TLQ
Subjt:  KVIHSNILKGKEKNGKEKENVTNGNVEETAGKEYAQRWGEAMEQSPVPLINKEPHLETNRSSFKRKNKVQAVVSKRKRKYQQGFVAYSPSTVPINSLTLQ

Query:  NDPQTLPDNHSS
        +DPQTLP+NHSS
Subjt:  NDPQTLPDNHSS

XP_022155098.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia]1.5e-1565Show/hide
Query:  QTLPDNHSSNLLAPVPVEPLQPPYPKWYDPHVRCDYHAGAVGHSTENCTSLKHEVQVLMR
        + LP    +N LAPVPV+P+QPPYP WYD + RCDYHAGA+GHSTENCT+LK+ VQ L++
Subjt:  QTLPDNHSSNLLAPVPVEPLQPPYPKWYDPHVRCDYHAGAVGHSTENCTSLKHEVQVLMR

XP_022158986.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]1.0e-1663.08Show/hide
Query:  QTLPDNHSSNLLAPVPVEPLQPPYPKWYDPHVRCDYHAGAVGHSTENCTSLKHEVQVLMRKTALN
        + LP    +N LAPVPV+P+QPPYP+WYD + RCDYHAGA+GHSTENCT+LK+ VQ L++   LN
Subjt:  QTLPDNHSSNLLAPVPVEPLQPPYPKWYDPHVRCDYHAGAVGHSTENCTSLKHEVQVLMRKTALN

XP_031737553.1 LOW QUALITY PROTEIN: uncharacterized protein LOC116402446 [Cucumis sativus]8.7e-1640.71Show/hide
Query:  KRKYQQGFVAYSPSTVPI---------NSLTLQNDP------QTLPDNHSSNLLAPVPVEPLQPPYPKWYDPHVRCDYHAGAVGHSTENCTSLKHEVQVL
        +RK+ Q F +Y  +   I         NS T + DP      + LP    +  LAP+P+ P+QPPYPKWYDP+ RCDYHAG VGHSTENC +LK +VQ L
Subjt:  KRKYQQGFVAYSPSTVPI---------NSLTLQNDP------QTLPDNHSSNLLAPVPVEPLQPPYPKWYDPHVRCDYHAGAVGHSTENCTSLKHEVQVL

Query:  MRKTALNQFPDPVETNAVKPGVPKMVLRAVPLPVHINTVV
        +    L          + K    K  +   PLP H N+ V
Subjt:  MRKTALNQFPDPVETNAVKPGVPKMVLRAVPLPVHINTVV

TrEMBL top hitse value%identityAlignment
A0A5A7VK41 Reverse transcriptase domain-containing protein3.6e-1537.04Show/hide
Query:  INKEPHLETNRSSFKRKNKVQAVVSKRKRKYQQGFVAY--SPSTVPINSLT----LQNDPQTLPDNHSSNLL---APVPVEPLQPPYPKWYDPHVRCDYH
        I+K+   E +   F    K +++    +RKY+Q F +Y  + S +P NS      +   P+ +  N     +   AP+P+ P+QPPYPKWYD + RCDYH
Subjt:  INKEPHLETNRSSFKRKNKVQAVVSKRKRKYQQGFVAY--SPSTVPINSLT----LQNDPQTLPDNHSSNLL---APVPVEPLQPPYPKWYDPHVRCDYH

Query:  AGAVGHSTENCTSLKHEVQVLMRKTALNQFPDPVETNAVKPGVPKMVLRAVPLPVHINTVVE
        AG VGHSTENC +LK +VQ L+    L+      + +  KP V +      PLP H N  V+
Subjt:  AGAVGHSTENCTSLKHEVQVLMRKTALNQFPDPVETNAVKPGVPKMVLRAVPLPVHINTVVE

A0A6J1D099 Ribonuclease H2.1e-1563.33Show/hide
Query:  QTLPDNHSSNLLAPVPVEPLQPPYPKWYDPHVRCDYHAGAVGHSTENCTSLKHEVQVLMR
        + LP    +N LAPVPV+P+QPPYP+WYD + RCDYHAGA+ HSTENCT LK+ VQ L++
Subjt:  QTLPDNHSSNLLAPVPVEPLQPPYPKWYDPHVRCDYHAGAVGHSTENCTSLKHEVQVLMR

A0A6J1DHS7 uncharacterized protein LOC1110210291.0e-7070.75Show/hide
Query:  MEVQNVELKKMRQDIDKIQGQITEIFNILKNI--VGGIFQPNNLVKPHNNSSPKVNSPPCQSIEGFPQHNSSHEAQLSKKGQQAPTICPVEFTFQDGQAS
        MEVQNVELKKMRQDID IQ Q+ +I N+LKNI  VGG  QPNNLV+P+NNSSP+V+ P CQS EGFPQH+SSH+AQLSKKGQQ PT C VEFTF+D Q  
Subjt:  MEVQNVELKKMRQDIDKIQGQITEIFNILKNI--VGGIFQPNNLVKPHNNSSPKVNSPPCQSIEGFPQHNSSHEAQLSKKGQQAPTICPVEFTFQDGQAS

Query:  KVIHSNILKGKEKNGKEKENVTNGNVEETAGKEYAQRWGEAMEQSPVPLINKEPHLETNRSSFKRKNKVQAVVSKRKRKYQQGFVAYSPSTVPINSLTLQ
        KV +S+ LK     G+EKENVT             QRWG+A+EQ PVPLINKEPH + N+SS KRKNKV AVVSKRKRKYQQGFVAYSPSTVPINS+TLQ
Subjt:  KVIHSNILKGKEKNGKEKENVTNGNVEETAGKEYAQRWGEAMEQSPVPLINKEPHLETNRSSFKRKNKVQAVVSKRKRKYQQGFVAYSPSTVPINSLTLQ

Query:  NDPQTLPDNHSS
        +DPQTLP+NHSS
Subjt:  NDPQTLPDNHSS

A0A6J1DM29 LOW QUALITY PROTEIN: uncharacterized protein LOC1110222317.2e-1665Show/hide
Query:  QTLPDNHSSNLLAPVPVEPLQPPYPKWYDPHVRCDYHAGAVGHSTENCTSLKHEVQVLMR
        + LP    +N LAPVPV+P+QPPYP WYD + RCDYHAGA+GHSTENCT+LK+ VQ L++
Subjt:  QTLPDNHSSNLLAPVPVEPLQPPYPKWYDPHVRCDYHAGAVGHSTENCTSLKHEVQVLMR

A0A6J1E2J7 Ribonuclease H5.0e-1763.08Show/hide
Query:  QTLPDNHSSNLLAPVPVEPLQPPYPKWYDPHVRCDYHAGAVGHSTENCTSLKHEVQVLMRKTALN
        + LP    +N LAPVPV+P+QPPYP+WYD + RCDYHAGA+GHSTENCT+LK+ VQ L++   LN
Subjt:  QTLPDNHSSNLLAPVPVEPLQPPYPKWYDPHVRCDYHAGAVGHSTENCTSLKHEVQVLMRKTALN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTGCAGAATGTAGAGCTAAAGAAGATGAGACAAGACATTGATAAGATTCAGGGACAAATCACAGAAATTTTCAATATCTTAAAAAATATTGTTGGGGGC
ATTTTTCAACCTAACAATTTAGTCAAACCTCATAATAATTCATCACCTAAGGTGAACTCACCTCCTTGTCAGTCAATAGAGGGCTTCCCCCAGCATAATTCATCA
CATGAAGCTCAGCTTTCCAAGAAAGGCCAACAAGCTCCTACAATCTGTCCGGTTGAATTCACATTCCAAGATGGACAAGCATCAAAGGTCATTCACTCAAATATT
TTAAAAGGTAAAGAAAAAAATGGTAAAGAAAAAGAAAATGTTACCAATGGAAATGTTGAAGAGACTGCAGGGAAAGAATATGCTCAGAGATGGGGAGAAGCAATG
GAACAATCGCCAGTGCCTTTAATTAATAAAGAGCCACACCTTGAAACGAATAGAAGCTCTTTTAAAAGGAAAAATAAAGTTCAGGCAGTAGTTTCGAAGCGCAAG
AGGAAGTACCAACAAGGATTCGTGGCATACAGTCCTTCTACGGTACCCATAAACTCATTGACTCTGCAGAATGATCCACAAACATTACCTGACAATCATAGTAGT
AATCTATTAGCACCCGTACCCGTAGAGCCATTACAACCACCTTATCCAAAGTGGTACGACCCGCATGTTCGTTGTGATTACCATGCAGGAGCTGTAGGTCATTCA
ACTGAGAACTGTACTTCACTGAAGCATGAAGTGCAAGTGCTAATGAGGAAGACCGCTCTTAACCAGTTTCCCGATCCTGTTGAGACTAATGCGGTCAAGCCTGGG
GTGCCAAAGATGGTACTTCGGGCAGTTCCTCTTCCAGTGCACATCAACACCGTAGTGGAAACATTTCCCTTTGATTACGGCCTTAGCCTTCTTCCCCTTCTGGGT
AGTAGTACGGACAATTCTATTCCCCTATCCACCTTTCTTCTTCTTGAGGTTCTTCGTACCCGAAGAAGAAGGTCTAGGCTTAGTCCTAGAGGTCGAACCTCTATA
CAAGTTTTTGTTGGAGGTGACAACATTTGCCTCCCCTTCAGGTCCCTTGTTCTTCATGAGGGACTCGTAAGTCTGAAGCTCGTTGAGGAACGTGGTCAGGTTCTA
TTCCAGTTTATTCATCATAACATTGCTGTGAAACTGAATGAAGCTCTTCGAAAGAGACTCCAGAATAAAACTGACTTAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGTGCAGAATGTAGAGCTAAAGAAGATGAGACAAGACATTGATAAGATTCAGGGACAAATCACAGAAATTTTCAATATCTTAAAAAATATTGTTGGGGGC
ATTTTTCAACCTAACAATTTAGTCAAACCTCATAATAATTCATCACCTAAGGTGAACTCACCTCCTTGTCAGTCAATAGAGGGCTTCCCCCAGCATAATTCATCA
CATGAAGCTCAGCTTTCCAAGAAAGGCCAACAAGCTCCTACAATCTGTCCGGTTGAATTCACATTCCAAGATGGACAAGCATCAAAGGTCATTCACTCAAATATT
TTAAAAGGTAAAGAAAAAAATGGTAAAGAAAAAGAAAATGTTACCAATGGAAATGTTGAAGAGACTGCAGGGAAAGAATATGCTCAGAGATGGGGAGAAGCAATG
GAACAATCGCCAGTGCCTTTAATTAATAAAGAGCCACACCTTGAAACGAATAGAAGCTCTTTTAAAAGGAAAAATAAAGTTCAGGCAGTAGTTTCGAAGCGCAAG
AGGAAGTACCAACAAGGATTCGTGGCATACAGTCCTTCTACGGTACCCATAAACTCATTGACTCTGCAGAATGATCCACAAACATTACCTGACAATCATAGTAGT
AATCTATTAGCACCCGTACCCGTAGAGCCATTACAACCACCTTATCCAAAGTGGTACGACCCGCATGTTCGTTGTGATTACCATGCAGGAGCTGTAGGTCATTCA
ACTGAGAACTGTACTTCACTGAAGCATGAAGTGCAAGTGCTAATGAGGAAGACCGCTCTTAACCAGTTTCCCGATCCTGTTGAGACTAATGCGGTCAAGCCTGGG
GTGCCAAAGATGGTACTTCGGGCAGTTCCTCTTCCAGTGCACATCAACACCGTAGTGGAAACATTTCCCTTTGATTACGGCCTTAGCCTTCTTCCCCTTCTGGGT
AGTAGTACGGACAATTCTATTCCCCTATCCACCTTTCTTCTTCTTGAGGTTCTTCGTACCCGAAGAAGAAGGTCTAGGCTTAGTCCTAGAGGTCGAACCTCTATA
CAAGTTTTTGTTGGAGGTGACAACATTTGCCTCCCCTTCAGGTCCCTTGTTCTTCATGAGGGACTCGTAAGTCTGAAGCTCGTTGAGGAACGTGGTCAGGTTCTA
TTCCAGTTTATTCATCATAACATTGCTGTGAAACTGAATGAAGCTCTTCGAAAGAGACTCCAGAATAAAACTGACTTAGCTTGA
Protein sequenceShow/hide protein sequence
MEVQNVELKKMRQDIDKIQGQITEIFNILKNIVGGIFQPNNLVKPHNNSSPKVNSPPCQSIEGFPQHNSSHEAQLSKKGQQAPTICPVEFTFQDGQASKVIHSNI
LKGKEKNGKEKENVTNGNVEETAGKEYAQRWGEAMEQSPVPLINKEPHLETNRSSFKRKNKVQAVVSKRKRKYQQGFVAYSPSTVPINSLTLQNDPQTLPDNHSS
NLLAPVPVEPLQPPYPKWYDPHVRCDYHAGAVGHSTENCTSLKHEVQVLMRKTALNQFPDPVETNAVKPGVPKMVLRAVPLPVHINTVVETFPFDYGLSLLPLLG
SSTDNSIPLSTFLLLEVLRTRRRRSRLSPRGRTSIQVFVGGDNICLPFRSLVLHEGLVSLKLVEERGQVLFQFIHHNIAVKLNEALRKRLQNKTDLA