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Moc07g19990 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g19990
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr7:14343623..14344048
RNA-Seq ExpressionMoc07g19990
SyntenyMoc07g19990
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD45748.1 TPA_asm: hypothetical protein HUJ06_003978 [Nelumbo nucifera]5.6e-0748.15Show/hide
Query:  IGSGCFNHTTEDVSFLSDV---CGRRGNAAAGNSLHPNEEEGHVN-IESCELGDVLH-KDGCHGPNLKKNVVSVSQVVDAG
        + SGC +H T + S LSDV   CG+R    A NSLHP   EG  N IE+  + + L  KD  H P LKKN+ SVSQ+ D+G
Subjt:  IGSGCFNHTTEDVSFLSDV---CGRRGNAAAGNSLHPNEEEGHVN-IESCELGDVLH-KDGCHGPNLKKNVVSVSQVVDAG

KAA8532301.1 hypothetical protein F0562_032334 [Nyssa sinensis]2.1e-0641.98Show/hide
Query:  IGSGCFNHTTEDVSFLSDVC---GRRGNAAAGNSLHPNEEEGHVNIES--CELGDVLHKDGCHGPNLKKNVVSVSQVVDAG
        + S C +H T + S L +VC   G+R    A NSLHP  +EG++N++     +G +  KD  H P LKKN+ SVSQ+ D+G
Subjt:  IGSGCFNHTTEDVSFLSDVC---GRRGNAAAGNSLHPNEEEGHVNIES--CELGDVLHKDGCHGPNLKKNVVSVSQVVDAG

KAA8540328.1 hypothetical protein F0562_024753 [Nyssa sinensis]1.2e-0644.44Show/hide
Query:  IGSGCFNHTTEDVSFLSDV---CGRRGNAAAGNSLHPNEEEGHVNIES--CELGDVLHKDGCHGPNLKKNVVSVSQVVDAG
        + SGC +H T + S LS+V    G+R    A NSLHP  +EG+ N++      G V  KD  H P LKKN+ SVSQ+ D+G
Subjt:  IGSGCFNHTTEDVSFLSDV---CGRRGNAAAGNSLHPNEEEGHVNIES--CELGDVLHKDGCHGPNLKKNVVSVSQVVDAG

KAA8541518.1 hypothetical protein F0562_022670 [Nyssa sinensis]7.3e-0744.44Show/hide
Query:  IGSGCFNHTTEDVSFLSDV---CGRRGNAAAGNSLHPNEEEGHVNIES--CELGDVLHKDGCHGPNLKKNVVSVSQVVDAG
        + SGC +H T + S LS+V    G+R    A NSLHP  +EG+ N++     +G V  KD  H P LKKN+ SVSQ+ D+G
Subjt:  IGSGCFNHTTEDVSFLSDV---CGRRGNAAAGNSLHPNEEEGHVNIES--CELGDVLHKDGCHGPNLKKNVVSVSQVVDAG

XP_022157658.1 serine/arginine-rich splicing factor RS2Z32-like [Momordica charantia]3.3e-0750.62Show/hide
Query:  IGSGCFNHTTEDVSFLSDV---CGRRGNAAAGNSLHPNEEEGHVNIE--SCELGDVLHKDGCHGPNLKKNVVSVSQVVDAG
        I SGC +H T + S LS+V    GRR  A A NSLHP  EEG VN+E  +  +G +  +D  H P LKKN+VSVSQ+ D+G
Subjt:  IGSGCFNHTTEDVSFLSDV---CGRRGNAAAGNSLHPNEEEGHVNIE--SCELGDVLHKDGCHGPNLKKNVVSVSQVVDAG

TrEMBL top hitse value%identityAlignment
A0A5J5ATF7 gag_pre-integrs domain-containing protein1.0e-0641.98Show/hide
Query:  IGSGCFNHTTEDVSFLSDVC---GRRGNAAAGNSLHPNEEEGHVNIES--CELGDVLHKDGCHGPNLKKNVVSVSQVVDAG
        + S C +H T + S L +VC   G+R    A NSLHP  +EG++N++     +G +  KD  H P LKKN+ SVSQ+ D+G
Subjt:  IGSGCFNHTTEDVSFLSDVC---GRRGNAAAGNSLHPNEEEGHVNIES--CELGDVLHKDGCHGPNLKKNVVSVSQVVDAG

A0A5J5B3A5 Integrase catalytic domain-containing protein3.0e-0643.21Show/hide
Query:  IGSGCFNHTTEDVSFLSDV---CGRRGNAAAGNSLHPNEEEGHVNIES--CELGDVLHKDGCHGPNLKKNVVSVSQVVDAG
        + SGC +H T +VS L +V    G+R      NSLHP  +EG+ N+++     G V  KD  H P LKKN+ SVSQ+ D G
Subjt:  IGSGCFNHTTEDVSFLSDV---CGRRGNAAAGNSLHPNEEEGHVNIES--CELGDVLHKDGCHGPNLKKNVVSVSQVVDAG

A0A5J5BCB3 Uncharacterized protein6.0e-0744.44Show/hide
Query:  IGSGCFNHTTEDVSFLSDV---CGRRGNAAAGNSLHPNEEEGHVNIES--CELGDVLHKDGCHGPNLKKNVVSVSQVVDAG
        + SGC +H T + S LS+V    G+R    A NSLHP  +EG+ N++      G V  KD  H P LKKN+ SVSQ+ D+G
Subjt:  IGSGCFNHTTEDVSFLSDV---CGRRGNAAAGNSLHPNEEEGHVNIES--CELGDVLHKDGCHGPNLKKNVVSVSQVVDAG

A0A5J5BFR6 Uncharacterized protein3.5e-0744.44Show/hide
Query:  IGSGCFNHTTEDVSFLSDV---CGRRGNAAAGNSLHPNEEEGHVNIES--CELGDVLHKDGCHGPNLKKNVVSVSQVVDAG
        + SGC +H T + S LS+V    G+R    A NSLHP  +EG+ N++     +G V  KD  H P LKKN+ SVSQ+ D+G
Subjt:  IGSGCFNHTTEDVSFLSDV---CGRRGNAAAGNSLHPNEEEGHVNIES--CELGDVLHKDGCHGPNLKKNVVSVSQVVDAG

A0A6J1DTX9 serine/arginine-rich splicing factor RS2Z32-like1.6e-0750.62Show/hide
Query:  IGSGCFNHTTEDVSFLSDV---CGRRGNAAAGNSLHPNEEEGHVNIE--SCELGDVLHKDGCHGPNLKKNVVSVSQVVDAG
        I SGC +H T + S LS+V    GRR  A A NSLHP  EEG VN+E  +  +G +  +D  H P LKKN+VSVSQ+ D+G
Subjt:  IGSGCFNHTTEDVSFLSDV---CGRRGNAAAGNSLHPNEEEGHVNIE--SCELGDVLHKDGCHGPNLKKNVVSVSQVVDAG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTACAGGAAATTAACAAGTCTGAACAACTCAATTGGGAACATTGTTTATGAATTGAAGTTATTGATCAACCCATTAATTGTTATACTAATGCTTCTTTTGATTAT
AGTACTGAAGATTGGGTCTATTGGTTCTGGTTGTTTTAATCATACTACTGAAGATGTATCTTTTCTTTCTGATGTTTGTGGAAGAAGAGGCAATGCGGCGGCTGGTAATT
CCTTACATCCCAATGAGGAAGAAGGACATGTCAATATTGAAAGTTGTGAATTGGGCGATGTTCTTCATAAAGATGGTTGTCATGGTCCAAATTTGAAGAAAAATGTTGTT
TCAGTCTCTCAGGTTGTTGATGCTGGGAGTGTTTCTGGAAACAAGTTGAATTATGGAAAAAATTCTGCTCATTCTTGTGCTAAAGATGTGATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTACAGGAAATTAACAAGTCTGAACAACTCAATTGGGAACATTGTTTATGAATTGAAGTTATTGATCAACCCATTAATTGTTATACTAATGCTTCTTTTGATTAT
AGTACTGAAGATTGGGTCTATTGGTTCTGGTTGTTTTAATCATACTACTGAAGATGTATCTTTTCTTTCTGATGTTTGTGGAAGAAGAGGCAATGCGGCGGCTGGTAATT
CCTTACATCCCAATGAGGAAGAAGGACATGTCAATATTGAAAGTTGTGAATTGGGCGATGTTCTTCATAAAGATGGTTGTCATGGTCCAAATTTGAAGAAAAATGTTGTT
TCAGTCTCTCAGGTTGTTGATGCTGGGAGTGTTTCTGGAAACAAGTTGAATTATGGAAAAAATTCTGCTCATTCTTGTGCTAAAGATGTGATGTGA
Protein sequenceShow/hide protein sequence
MLYRKLTSLNNSIGNIVYELKLLINPLIVILMLLLIIVLKIGSIGSGCFNHTTEDVSFLSDVCGRRGNAAAGNSLHPNEEEGHVNIESCELGDVLHKDGCHGPNLKKNVV
SVSQVVDAGSVSGNKLNYGKNSAHSCAKDVM