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Moc07g20160 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g20160
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr7:14535854..14542971
RNA-Seq ExpressionMoc07g20160
SyntenyMoc07g20160
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3479651.1 reverse transcriptase [Gossypium australe]1.1e-1330.74Show/hide
Query:  SPKRHNRHATWELIRRLYNSDHFAWVVGGDLNEILPTEEKFIGPWRKAAFKFEEAWTSDTRCGNI--ITEARSWEA-SQGNQHLDVCLKKCVAALEEWGR
        SP   +++  W L++RL    +F W+V GD NEIL + EK  G  R   +K  E +       N+  I  +R+W    +GN       ++          
Subjt:  SPKRHNRHATWELIRRLYNSDHFAWVVGGDLNEILPTEEKFIGPWRKAAFKFEEAWTSDTRCGNI--ITEARSWEA-SQGNQHLDVCLKKCVAALEEWGR

Query:  NFNKEFKNQISYLRSSFARVYSKPPPWYFKLIHEWERIFEQNF-------PCIVIE--------EMNGKLLASFESSEIERALKQMHPTKAPGPDGFPAL
          ++   N IS L     +   +      K+  E +  FE  F       P  +++        E+N  L A F   E+ +ALK M PTKAPGPDGFPA+
Subjt:  NFNKEFKNQISYLRSSFARVYSKPPPWYFKLIHEWERIFEQNF-------PCIVIE--------EMNGKLLASFESSEIERALKQMHPTKAPGPDGFPAL

Query:  FYQRYWTTLGSVEVLRLCPICLKKVETVDHA
        F+Q+YW  +G  EVL  C   L +    D A
Subjt:  FYQRYWTTLGSVEVLRLCPICLKKVETVDHA

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.2e-1928.9Show/hide
Query:  PKRHNRHATWELIRRLYNSDHFAWVVGGDLNEIL---------------------------PTEEKFIG---PWRKAAFKFEEAWTSDTR--CGNIIT--
        P  H RH TWEL+RR+ N D   W++GGD+N IL                            T+  F G    W    F  ++ W    R  C +     
Subjt:  PKRHNRHATWELIRRLYNSDHFAWVVGGDLNEIL---------------------------PTEEKFIG---PWRKAAFKFEEAWTSDTR--CGNIIT--

Query:  ---EARSWEASQGNQHLDVCLKKCVAALEEWGRNFNKEFKNQISYLRSSFARVYSKPPPWYFKLIH----------EWERIFEQN---------------
            +  W  +  N      ++   +AL  WGR+   +   QI   +++    Y++P P  F +IH          E E IF +                
Subjt:  ---EARSWEASQGNQHLDVCLKKCVAALEEWGRNFNKEFKNQISYLRSSFARVYSKPPPWYFKLIH----------EWERIFEQN---------------

Query:  ----------FPCIVIEEMNGKLLASFESSEIERALKQMHPTKAPGPDGFPALFYQRYWTTLG
                   P  +  E+N +LLA +   EIE A++QM PTKA GPDGFPALFYQ YW  +G
Subjt:  ----------FPCIVIEEMNGKLLASFESSEIERALKQMHPTKAPGPDGFPALFYQRYWTTLG

XP_024195790.1 uncharacterized protein LOC112198938 [Rosa chinensis]1.3e-1429.51Show/hide
Query:  PKRHNRHATWELIRRLYNSDHFAWVVGGDLNEILPTEEKFIGPWR--KAAFKFEEAW-TSDTRCGNIITEARSWEASQGNQHLDVCLKKCVAALEEWGRN
        PK  NRH TW LI+ L    ++ W++GGD NEIL + EK  GP R  +    F EA   S  +         +W  ++  + + + L + VA    W + 
Subjt:  PKRHNRHATWELIRRLYNSDHFAWVVGGDLNEILPTEEKFIGPWR--KAAFKFEEAW-TSDTRCGNIITEARSWEASQGNQHLDVCLKKCVAALEEWGRN

Query:  F--------------------------------NKEFKNQISYLRSSFAR----------VYSKPPPWYFKLIHEWERIFEQNFPCIVIEEMNGKLLASF
        F                                 K+F+ +  +LR +  R            S P       + E +  F  N   I+ +E N +L +  
Subjt:  F--------------------------------NKEFKNQISYLRSSFAR----------VYSKPPPWYFKLIHEWERIFEQNFPCIVIEEMNGKLLASF

Query:  ESSEIERALKQMHPTKAPGPDGFPALFYQRYWTTLGS--VEVLR
        +  E+ +ALKQMHP+KAPGPDGF   FYQ++W  +GS  VE +R
Subjt:  ESSEIERALKQMHPTKAPGPDGFPALFYQRYWTTLGS--VEVLR

XP_042950043.1 uncharacterized protein LOC122282155 [Carya illinoinensis]6.3e-1429.72Show/hide
Query:  VEACVKVSPKRHNRHATWELIRRLYNSDHFAWVVGGDLNEILPTEEKFIGPWRKAAFKFEEAWTSDTRCGNIITEARSWEASQGNQHLDVCLKKCVAALE
        ++ CV  S  R   +  W       NSDH   VVG  L+ I    +++  P     F+FE  WT D  C  ++   R WE ++ N  L       +  ++
Subjt:  VEACVKVSPKRHNRHATWELIRRLYNSDHFAWVVGGDLNEILPTEEKFIGPWRKAAFKFEEAWTSDTRCGNIITEARSWEASQGNQHLDVCLKKCVAALE

Query:  EWGRNFNKEFKNQISYLRSSFARVYSKPPPWYFKLIHEWERIFEQNFPCI-------------VIEEMNGKLLASFESSEIERALKQMHPTKAPGPDGFP
        E  RN  +  +N+I  +R    RV  +           +E I     P +             V  EMN  LL  F  +E+E+A+  M P K+PGPDGF 
Subjt:  EWGRNFNKEFKNQISYLRSSFARVYSKPPPWYFKLIHEWERIFEQNFPCI-------------VIEEMNGKLLASFESSEIERALKQMHPTKAPGPDGFP

Query:  ALFYQRYWTTLG
        A F+Q+YW  +G
Subjt:  ALFYQRYWTTLG

XP_042974662.1 uncharacterized protein LOC122306298 [Carya illinoinensis]1.3e-1930.21Show/hide
Query:  EACVKARSNAFYHL-VKLNPIQVEVE---ACVKVSPKRHNRHATWELIRRLYNSDHFAWVVGGDLNEILPTEEKFIGPWRKAAFKFEEAWTSDTRCGNII
        E  +  +S +F+H+  K++ I   +E     +   P+   R  TW L+R L N D ++     D   I+         +R+  F+FE  W  D  CG++I
Subjt:  EACVKARSNAFYHL-VKLNPIQVEVE---ACVKVSPKRHNRHATWELIRRLYNSDHFAWVVGGDLNEILPTEEKFIGPWRKAAFKFEEAWTSDTRCGNII

Query:  TEARSWEASQGNQHLDVC---LKKCVAALEEWGRNFNKEFKNQ-----ISYLRSSFARVYSKPPPWYFKLIHEWERIFEQNFPCIVIEEMNGKLLASFES
          +R W  +  N+ +D     L+ C   LE W +     + N      ISY +S F      P           + +F ++    VI++MN +L   F  
Subjt:  TEARSWEASQGNQHLDVC---LKKCVAALEEWGRNFNKEFKNQ-----ISYLRSSFARVYSKPPPWYFKLIHEWERIFEQNFPCIVIEEMNGKLLASFES

Query:  SEIERALKQMHPTKAPGPDGFPALFYQRYWTTLGS
         E++ AL QMHPTK+PGPDG P LF+Q+YW  +G+
Subjt:  SEIERALKQMHPTKAPGPDGFPALFYQRYWTTLGS

TrEMBL top hitse value%identityAlignment
A0A2N9G7B6 Uncharacterized protein1.0e-1432.46Show/hide
Query:  LPTEEKFIGPWRKAAFKFEEAWTSDTRCGNIITEARSWEASQGNQHLDVCLKKCVAALEEWGRNFNKEFKNQISYLRSSFARVYSK-----PPPWYFKLI
        + TE  FI    K  F+FEE WTSD  C  ++ ++   EA+     ++  LK+    +   GR+ ++     +S LR     + +K        +  +L 
Subjt:  LPTEEKFIGPWRKAAFKFEEAWTSDTRCGNIITEARSWEASQGNQHLDVCLKKCVAALEEWGRNFNKEFKNQISYLRSSFARVYSK-----PPPWYFKLI

Query:  HEWERIFE--QNFPCIVIEEMNGKLLASFESSEIERALKQMHPTKAPGPDGFPALFYQRYWTTLGSVEVLRLCPICL---KKVETVDHALV
           E+I E   N   +V EEMN +L+  F + E++ ALKQM P KAPGPDG P +FYQ YW  +G  +V      CL   K ++ ++H  +
Subjt:  HEWERIFE--QNFPCIVIEEMNGKLLASFESSEIERALKQMHPTKAPGPDGFPALFYQRYWTTLGSVEVLRLCPICL---KKVETVDHALV

A0A2N9HTH6 Reverse transcriptase domain-containing protein1.1e-1635.98Show/hide
Query:  RKAAFKFEEAWTSDTRCGNIITEARSWEASQGNQHLDVC--LKKCVAALEEWGRNFNKEFKNQISYLRSSFARVYSKPPPWYFKLIHE--WERIFEQNFP
        RK  F FE  W  D +C ++I  A   E   G+    V   LK C  AL  W       F ++I   R    R+  + P    + + E  +++IF  N P
Subjt:  RKAAFKFEEAWTSDTRCGNIITEARSWEASQGNQHLDVC--LKKCVAALEEWGRNFNKEFKNQISYLRSSFARVYSKPPPWYFKLIHE--WERIFEQNFP

Query:  -------CI------VIEEMNGKLLASFESSEIERALKQMHPTKAPGPDGFPALFYQRYWTTLG
               C+      V E MN +L+A F + E+ +ALKQM+PTKAPGPDG  A+FYQ YW  +G
Subjt:  -------CI------VIEEMNGKLLASFESSEIERALKQMHPTKAPGPDGFPALFYQRYWTTLG

A0A5B6WD12 Reverse transcriptase5.2e-1430.74Show/hide
Query:  SPKRHNRHATWELIRRLYNSDHFAWVVGGDLNEILPTEEKFIGPWRKAAFKFEEAWTSDTRCGNI--ITEARSWEA-SQGNQHLDVCLKKCVAALEEWGR
        SP   +++  W L++RL    +F W+V GD NEIL + EK  G  R   +K  E +       N+  I  +R+W    +GN       ++          
Subjt:  SPKRHNRHATWELIRRLYNSDHFAWVVGGDLNEILPTEEKFIGPWRKAAFKFEEAWTSDTRCGNI--ITEARSWEA-SQGNQHLDVCLKKCVAALEEWGR

Query:  NFNKEFKNQISYLRSSFARVYSKPPPWYFKLIHEWERIFEQNF-------PCIVIE--------EMNGKLLASFESSEIERALKQMHPTKAPGPDGFPAL
          ++   N IS L     +   +      K+  E +  FE  F       P  +++        E+N  L A F   E+ +ALK M PTKAPGPDGFPA+
Subjt:  NFNKEFKNQISYLRSSFARVYSKPPPWYFKLIHEWERIFEQNF-------PCIVIE--------EMNGKLLASFESSEIERALKQMHPTKAPGPDGFPAL

Query:  FYQRYWTTLGSVEVLRLCPICLKKVETVDHA
        F+Q+YW  +G  EVL  C   L +    D A
Subjt:  FYQRYWTTLGSVEVLRLCPICLKKVETVDHA

A0A6J1DX30 uncharacterized protein LOC1110248741.1e-1928.9Show/hide
Query:  PKRHNRHATWELIRRLYNSDHFAWVVGGDLNEIL---------------------------PTEEKFIG---PWRKAAFKFEEAWTSDTR--CGNIIT--
        P  H RH TWEL+RR+ N D   W++GGD+N IL                            T+  F G    W    F  ++ W    R  C +     
Subjt:  PKRHNRHATWELIRRLYNSDHFAWVVGGDLNEIL---------------------------PTEEKFIG---PWRKAAFKFEEAWTSDTR--CGNIIT--

Query:  ---EARSWEASQGNQHLDVCLKKCVAALEEWGRNFNKEFKNQISYLRSSFARVYSKPPPWYFKLIH----------EWERIFEQN---------------
            +  W  +  N      ++   +AL  WGR+   +   QI   +++    Y++P P  F +IH          E E IF +                
Subjt:  ---EARSWEASQGNQHLDVCLKKCVAALEEWGRNFNKEFKNQISYLRSSFARVYSKPPPWYFKLIH----------EWERIFEQN---------------

Query:  ----------FPCIVIEEMNGKLLASFESSEIERALKQMHPTKAPGPDGFPALFYQRYWTTLG
                   P  +  E+N +LLA +   EIE A++QM PTKA GPDGFPALFYQ YW  +G
Subjt:  ----------FPCIVIEEMNGKLLASFESSEIERALKQMHPTKAPGPDGFPALFYQRYWTTLG

A0A803PJG3 Uncharacterized protein2.6e-1831.02Show/hide
Query:  PKRHNRHATWELIRRLYNSDHFAWVVGGDLNEILPTEEKFIGPWRKA---AFKFEEAWTSDTRCGNIITEARSWEASQGNQHLDVCLKKCVAALEEWGRN
        PKR  R  +W+L+R L N  +  W + GDLN +    EK  G +      +F+FE AW  +  C  ++ +   WE S G  ++   ++KC   L +WGR 
Subjt:  PKRHNRHATWELIRRLYNSDHFAWVVGGDLNEILPTEEKFIGPWRKA---AFKFEEAWTSDTRCGNIITEARSWEASQGNQHLDVCLKKCVAALEEWGRN

Query:  FNKEF-------KNQISYLRSSFARVYSKPPPWYFKLIHEWERIFEQNFPCIVIE--------------EMNGKLLASFESSEIERALKQMHPTKAPGPD
            F        N IS L+ +  R  +    W   L H     F+  F    I+              E N  LL      E+  AL QMHP K+PGPD
Subjt:  FNKEF-------KNQISYLRSSFARVYSKPPPWYFKLIHEWERIFEQNFPCIVIE--------------EMNGKLLASFESSEIERALKQMHPTKAPGPD

Query:  GFPALFYQRYWTTLGS
        G    FYQ++W+ +G+
Subjt:  GFPALFYQRYWTTLGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCTACGGCTATTTCTAGGACCAACCGACACCTCACTTGCACAGGTCAAGAACTTCCGAGTAAATCAAATAACTTCATCTTTTTCGGGAGTTGCATTATCTGTTGG
ATTTACACATGACACGTCCTTATTGGAAAGGAAAAGCATGATTAGCTTTAAGTCTGTGAAGCCAAGTTTTATCACCTCGAACGCCGTGATTCACGCTTACCTTAAAGAGT
CATTAGGGCCTTATCGAGAATCCTGTCAGAGACCTTGCCTATATATAGAAACCATTTGCCTCCATTCCAGATACGCGAACACTGTCTTTTCTCTCGAGTACAACTCGGGC
GTCAGAGTGTTTTCTCTTGCAAGTCTCTTGCTCAGCACATTTCGACACATCCTTAAGGTTGTCCTTCCATCCGAGCCGAGCTTGCAAGCTTGGTCCATTGCATTTTATCA
TTCGATTAAATCAAACCCGATCCAAGTCGAGGTTGAAGCCTATGTTAAAGCCAAGTCCATTGTATTTTATCATTCGGTTAAATCGAACCCGATCCAAGTCGAGGTCGAAG
CTTGTGTTAAAGCTAGGTCCGTTGCATTTTACCATCCGGTTAAATTGAACTCGATCCAAGTCGATGTCCAAGCTTGTGTTAAAGCTAGGTCCATTGCATTTTACCATCTT
GTTAAATCGAACCCGATCCAAGTCGAGGTCGAAGTCTGTGTTAAAACCAGGTCTGTTGCATTTTATCATTCAGTTAAATCGAACCCGATCAAAGTCGAGGTCGAAGCCTG
TGTTAAAGCCAGGTCTAATGCATTTTATCATCTGGTTAAATTGAACCCGATCCAAGTCGAGGTCGAAGCTTGTGTTAAAGTCAGCCCGAAGAGACATAATCGGCATGCTA
CTTGGGAGCTAATCAGACGGCTTTATAATTCGGATCATTTTGCTTGGGTTGTGGGAGGCGACTTGAATGAGATTTTACCAACAGAGGAGAAATTTATAGGCCCGTGGAGG
AAGGCTGCTTTCAAATTTGAGGAAGCTTGGACTAGTGACACAAGATGTGGAAACATTATTACTGAGGCAAGAAGTTGGGAGGCGTCTCAAGGCAATCAACATTTGGATGT
ATGTTTGAAGAAGTGTGTTGCAGCTTTGGAGGAGTGGGGAAGAAATTTCAACAAAGAGTTCAAGAACCAGATTTCCTATCTGCGTTCTTCCTTCGCCCGAGTGTACTCAA
AGCCCCCTCCCTGGTATTTCAAGCTTATTCATGAATGGGAAAGAATCTTTGAACAGAATTTTCCTTGCATAGTGATTGAGGAGATGAATGGGAAGTTGTTGGCGTCTTTT
GAGAGTAGTGAAATTGAGAGAGCTTTGAAGCAGATGCACCCCACAAAGGCTCCTGGTCCAGATGGATTTCCCGCTCTTTTCTATCAGCGTTACTGGACGACACTGGGGAG
TGTTGAAGTGTTACGTTTATGCCCGATTTGTTTGAAGAAGGTGGAGACGGTAGATCATGCCCTTGTGAGGTGTAAAGGGCACAACAGATTCGGAATTGTTTGTTCCCAAA
CAGGGTCAGTGGAGATTGCTTCAATAATTGCTTTATTGATTGGTGGGCAGAGTGGCAGCATTCTTTCTCCAAAGCTGAAACAATTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCGCTACGGCTATTTCTAGGACCAACCGACACCTCACTTGCACAGGTCAAGAACTTCCGAGTAAATCAAATAACTTCATCTTTTTCGGGAGTTGCATTATCTGTTGG
ATTTACACATGACACGTCCTTATTGGAAAGGAAAAGCATGATTAGCTTTAAGTCTGTGAAGCCAAGTTTTATCACCTCGAACGCCGTGATTCACGCTTACCTTAAAGAGT
CATTAGGGCCTTATCGAGAATCCTGTCAGAGACCTTGCCTATATATAGAAACCATTTGCCTCCATTCCAGATACGCGAACACTGTCTTTTCTCTCGAGTACAACTCGGGC
GTCAGAGTGTTTTCTCTTGCAAGTCTCTTGCTCAGCACATTTCGACACATCCTTAAGGTTGTCCTTCCATCCGAGCCGAGCTTGCAAGCTTGGTCCATTGCATTTTATCA
TTCGATTAAATCAAACCCGATCCAAGTCGAGGTTGAAGCCTATGTTAAAGCCAAGTCCATTGTATTTTATCATTCGGTTAAATCGAACCCGATCCAAGTCGAGGTCGAAG
CTTGTGTTAAAGCTAGGTCCGTTGCATTTTACCATCCGGTTAAATTGAACTCGATCCAAGTCGATGTCCAAGCTTGTGTTAAAGCTAGGTCCATTGCATTTTACCATCTT
GTTAAATCGAACCCGATCCAAGTCGAGGTCGAAGTCTGTGTTAAAACCAGGTCTGTTGCATTTTATCATTCAGTTAAATCGAACCCGATCAAAGTCGAGGTCGAAGCCTG
TGTTAAAGCCAGGTCTAATGCATTTTATCATCTGGTTAAATTGAACCCGATCCAAGTCGAGGTCGAAGCTTGTGTTAAAGTCAGCCCGAAGAGACATAATCGGCATGCTA
CTTGGGAGCTAATCAGACGGCTTTATAATTCGGATCATTTTGCTTGGGTTGTGGGAGGCGACTTGAATGAGATTTTACCAACAGAGGAGAAATTTATAGGCCCGTGGAGG
AAGGCTGCTTTCAAATTTGAGGAAGCTTGGACTAGTGACACAAGATGTGGAAACATTATTACTGAGGCAAGAAGTTGGGAGGCGTCTCAAGGCAATCAACATTTGGATGT
ATGTTTGAAGAAGTGTGTTGCAGCTTTGGAGGAGTGGGGAAGAAATTTCAACAAAGAGTTCAAGAACCAGATTTCCTATCTGCGTTCTTCCTTCGCCCGAGTGTACTCAA
AGCCCCCTCCCTGGTATTTCAAGCTTATTCATGAATGGGAAAGAATCTTTGAACAGAATTTTCCTTGCATAGTGATTGAGGAGATGAATGGGAAGTTGTTGGCGTCTTTT
GAGAGTAGTGAAATTGAGAGAGCTTTGAAGCAGATGCACCCCACAAAGGCTCCTGGTCCAGATGGATTTCCCGCTCTTTTCTATCAGCGTTACTGGACGACACTGGGGAG
TGTTGAAGTGTTACGTTTATGCCCGATTTGTTTGAAGAAGGTGGAGACGGTAGATCATGCCCTTGTGAGGTGTAAAGGGCACAACAGATTCGGAATTGTTTGTTCCCAAA
CAGGGTCAGTGGAGATTGCTTCAATAATTGCTTTATTGATTGGTGGGCAGAGTGGCAGCATTCTTTCTCCAAAGCTGAAACAATTTTAG
Protein sequenceShow/hide protein sequence
MPLRLFLGPTDTSLAQVKNFRVNQITSSFSGVALSVGFTHDTSLLERKSMISFKSVKPSFITSNAVIHAYLKESLGPYRESCQRPCLYIETICLHSRYANTVFSLEYNSG
VRVFSLASLLLSTFRHILKVVLPSEPSLQAWSIAFYHSIKSNPIQVEVEAYVKAKSIVFYHSVKSNPIQVEVEACVKARSVAFYHPVKLNSIQVDVQACVKARSIAFYHL
VKSNPIQVEVEVCVKTRSVAFYHSVKSNPIKVEVEACVKARSNAFYHLVKLNPIQVEVEACVKVSPKRHNRHATWELIRRLYNSDHFAWVVGGDLNEILPTEEKFIGPWR
KAAFKFEEAWTSDTRCGNIITEARSWEASQGNQHLDVCLKKCVAALEEWGRNFNKEFKNQISYLRSSFARVYSKPPPWYFKLIHEWERIFEQNFPCIVIEEMNGKLLASF
ESSEIERALKQMHPTKAPGPDGFPALFYQRYWTTLGSVEVLRLCPICLKKVETVDHALVRCKGHNRFGIVCSQTGSVEIASIIALLIGGQSGSILSPKLKQF