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Moc07g20170 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g20170
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionU11/U12 small nuclear ribonucleoprotein 48 kDa protein
Genome locationchr7:14549462..14555911
RNA-Seq ExpressionMoc07g20170
SyntenyMoc07g20170
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151686.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Momordica charantia]1.0e-0881.4Show/hide
Query:  ELALYALVKYNSQLNDLQLLHGNHSGLTGCTTLDKVVAMVLRV
        ELA+YALVKY+SQLNDLQLL GNHSGL G TT DKVVA+ LRV
Subjt:  ELALYALVKYNSQLNDLQLLHGNHSGLTGCTTLDKVVAMVLRV
TrEMBL top hitse value%identityAlignment
A0A6J1DFF2 U11/U12 small nuclear ribonucleoprotein 48 kDa protein5.0e-0981.4Show/hide
Query:  ELALYALVKYNSQLNDLQLLHGNHSGLTGCTTLDKVVAMVLRV
        ELA+YALVKY+SQLNDLQLL GNHSGL G TT DKVVA+ LRV
Subjt:  ELALYALVKYNSQLNDLQLLHGNHSGLTGCTTLDKVVAMVLRV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTGTCACCTGTTGGAATCTACAATGTCGTCGCCGGAATCTGGGCGTCGGTCGGAGGTTGCTGCGCTGGTGGGAGTCAGATCACCTGATGTTGTTGCTATAGGCGC
CGTTCGTGGAGGCTTCGACGTCGACTTGGATGGTTTCGATTTAATGGAACGAGGAAATGCAACAGATCTGGCTTTAACAATAGGCTTTGACCTCGACTTGGATTGGGTTC
GATTTAACTGGAAGAGAAAATGCAACGGACCTAGCTTTAACACAGGCTTCGACCTCGACTTGGATCAGGTGAGACGTCGATCGGTCATTAAACGGCTGCAACAGCGTGAA
CAGTTAACAACTGGAATGCCCAGCGATCACAAAGGATGGGATAAGAATAAAGAACTTGCACTTTATGCTTTAGTGAAGTACAATTCTCAGTTGAATGACCTACAACTTCT
GCATGGTAATCACAGTGGACTTACAGGTTGTACTACTTTGGATAAGGTGGTTGCAATGGTTCTACGGGTAATGCTGGCAAACTTGGATGTGGGCCATTCTGCAGAGCCAA
TGAGTTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAACTGTCACCTGTTGGAATCTACAATGTCGTCGCCGGAATCTGGGCGTCGGTCGGAGGTTGCTGCGCTGGTGGGAGTCAGATCACCTGATGTTGTTGCTATAGGCGC
CGTTCGTGGAGGCTTCGACGTCGACTTGGATGGTTTCGATTTAATGGAACGAGGAAATGCAACAGATCTGGCTTTAACAATAGGCTTTGACCTCGACTTGGATTGGGTTC
GATTTAACTGGAAGAGAAAATGCAACGGACCTAGCTTTAACACAGGCTTCGACCTCGACTTGGATCAGGTGAGACGTCGATCGGTCATTAAACGGCTGCAACAGCGTGAA
CAGTTAACAACTGGAATGCCCAGCGATCACAAAGGATGGGATAAGAATAAAGAACTTGCACTTTATGCTTTAGTGAAGTACAATTCTCAGTTGAATGACCTACAACTTCT
GCATGGTAATCACAGTGGACTTACAGGTTGTACTACTTTGGATAAGGTGGTTGCAATGGTTCTACGGGTAATGCTGGCAAACTTGGATGTGGGCCATTCTGCAGAGCCAA
TGAGTTTATGA
Protein sequenceShow/hide protein sequence
MNCHLLESTMSSPESGRRSEVAALVGVRSPDVVAIGAVRGGFDVDLDGFDLMERGNATDLALTIGFDLDLDWVRFNWKRKCNGPSFNTGFDLDLDQVRRRSVIKRLQQRE
QLTTGMPSDHKGWDKNKELALYALVKYNSQLNDLQLLHGNHSGLTGCTTLDKVVAMVLRVMLANLDVGHSAEPMSL