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Moc07g20510 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g20510
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr7:14795492..14796068
RNA-Seq ExpressionMoc07g20510
SyntenyMoc07g20510
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]2.0e-2975.82Show/hide
Query:  PSQHHFSKPEQMMSPPTVLNLGALPTKTNPVRQTAPSNEKFEVLEERLRIVEETDVFGNIDASQLYLVSGLVIPPKFKMPEFKKYDGSSCP
        P+   F +PEQMMSPPTVLNLG L  KT+PV Q APSNEKFEVL+ERLR +E TDVFGNIDASQL  VSGLVIPPK K+PEF+KY+GSSCP
Subjt:  PSQHHFSKPEQMMSPPTVLNLGALPTKTNPVRQTAPSNEKFEVLEERLRIVEETDVFGNIDASQLYLVSGLVIPPKFKMPEFKKYDGSSCP

XP_022149382.1 uncharacterized protein LOC111017812 [Momordica charantia]8.0e-3451.53Show/hide
Query:  MEDQKAEQEKTRKDIEELQEKLYAILLVLEKGKR---------------------------LRILLH-----------LATLSMSRKKPHFIHLDTVHLL
        M+DQKAEQEK RKDIEEL+EKL  ILL LEKGK                            LR++             L  + + +  P F+        
Subjt:  MEDQKAEQEKTRKDIEELQEKLYAILLVLEKGKR---------------------------LRILLH-----------LATLSMSRKKPHFIHLDTVHLL

Query:  GNSANPSQHHFSKPEQMMSPPTVLNLGALPTKTNPVRQTAPSNEKFEVLEERLRIVEETDVFGNIDASQLYLVSGLVIPPKFKMPEFKKYDGSSCP
        G    P+   F +PEQMM PPTVLNLG L  KT+PV Q+ PSNEKFEVLEERL  VE TDVFGNIDASQL L+SGLVI  KFK+PEF+KYDGSSCP
Subjt:  GNSANPSQHHFSKPEQMMSPPTVLNLGALPTKTNPVRQTAPSNEKFEVLEERLRIVEETDVFGNIDASQLYLVSGLVIPPKFKMPEFKKYDGSSCP

XP_022155098.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia]3.4e-3249.74Show/hide
Query:  MMEDQKAEQEKTRKDIEELQEKLYAILLVLEKGKRL-------------------RILLHLATLSMSRKKPHFIHLDTVH---------------LLGNS
        M +D+K+EQEKTRKDIEEL+EKL AILL LEKGK +                         A  S       F+   T +               + G  
Subjt:  MMEDQKAEQEKTRKDIEELQEKLYAILLVLEKGKRL-------------------RILLHLATLSMSRKKPHFIHLDTVH---------------LLGNS

Query:  ANPSQHHFSKPEQMMSPPTVLNLGALPTKTNPVRQTAPSNEKFEVLEERLRIVEETDVFGNIDASQLYLVSGLVIPPKFKMPEFKKYDGSSCP
          P+   F +PEQ+++PPTVLNLG      +P RQ APS+EK EVLEERLR VE TDVFGNIDASQL L SGLVIPPKFK+PEF+KY+GSSCP
Subjt:  ANPSQHHFSKPEQMMSPPTVLNLGALPTKTNPVRQTAPSNEKFEVLEERLRIVEETDVFGNIDASQLYLVSGLVIPPKFKMPEFKKYDGSSCP

XP_022157796.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]1.9e-3554.17Show/hide
Query:  MEDQKAEQEKTRKDIEELQEKLYAILLVLEKGKRLRILLHLATLSMSRKKPH-------------------FIHLDTVH---------------LLGNSA
        MEDQKAEQEKTRKDIEEL+EKL  I L LEKGK        AT S    +P                    F+   T +               + G   
Subjt:  MEDQKAEQEKTRKDIEELQEKLYAILLVLEKGKRLRILLHLATLSMSRKKPH-------------------FIHLDTVH---------------LLGNSA

Query:  NPSQHHFSKPEQMMSPPTVLNLGALPTKTNPVRQTAPSNEKFEVLEERLRIVEETDVFGNIDASQLYLVSGLVIPPKFKMPEFKKYDGSSCP
         P+   F +PEQMMSPPTV NLG  P KT+PV Q A S EK EVLEERLR +E TDVFGNIDASQL LVSGLVIPPKFK+PEF+KYDGSSCP
Subjt:  NPSQHHFSKPEQMMSPPTVLNLGALPTKTNPVRQTAPSNEKFEVLEERLRIVEETDVFGNIDASQLYLVSGLVIPPKFKMPEFKKYDGSSCP

XP_022158986.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]5.0e-2883.75Show/hide
Query:  MMSPPTVLNLGALPTKTNPVRQTAPSNEKFEVLEERLRIVEETDVFGNIDASQLYLVSGLVIPPKFKMPEFKKYDGSSCP
        MMSPPTVLNLG LP KT+ V Q APSNEKFEVLEERLR +E T VFGNIDASQL LVSGLVIPPKFK+PEF+KYDGSSCP
Subjt:  MMSPPTVLNLGALPTKTNPVRQTAPSNEKFEVLEERLRIVEETDVFGNIDASQLYLVSGLVIPPKFKMPEFKKYDGSSCP

TrEMBL top hitse value%identityAlignment
A0A6J1D099 Ribonuclease H9.9e-3075.82Show/hide
Query:  PSQHHFSKPEQMMSPPTVLNLGALPTKTNPVRQTAPSNEKFEVLEERLRIVEETDVFGNIDASQLYLVSGLVIPPKFKMPEFKKYDGSSCP
        P+   F +PEQMMSPPTVLNLG L  KT+PV Q APSNEKFEVL+ERLR +E TDVFGNIDASQL  VSGLVIPPK K+PEF+KY+GSSCP
Subjt:  PSQHHFSKPEQMMSPPTVLNLGALPTKTNPVRQTAPSNEKFEVLEERLRIVEETDVFGNIDASQLYLVSGLVIPPKFKMPEFKKYDGSSCP

A0A6J1D7T3 uncharacterized protein LOC1110178123.9e-3451.53Show/hide
Query:  MEDQKAEQEKTRKDIEELQEKLYAILLVLEKGKR---------------------------LRILLH-----------LATLSMSRKKPHFIHLDTVHLL
        M+DQKAEQEK RKDIEEL+EKL  ILL LEKGK                            LR++             L  + + +  P F+        
Subjt:  MEDQKAEQEKTRKDIEELQEKLYAILLVLEKGKR---------------------------LRILLH-----------LATLSMSRKKPHFIHLDTVHLL

Query:  GNSANPSQHHFSKPEQMMSPPTVLNLGALPTKTNPVRQTAPSNEKFEVLEERLRIVEETDVFGNIDASQLYLVSGLVIPPKFKMPEFKKYDGSSCP
        G    P+   F +PEQMM PPTVLNLG L  KT+PV Q+ PSNEKFEVLEERL  VE TDVFGNIDASQL L+SGLVI  KFK+PEF+KYDGSSCP
Subjt:  GNSANPSQHHFSKPEQMMSPPTVLNLGALPTKTNPVRQTAPSNEKFEVLEERLRIVEETDVFGNIDASQLYLVSGLVIPPKFKMPEFKKYDGSSCP

A0A6J1DM29 LOW QUALITY PROTEIN: uncharacterized protein LOC1110222319.6e-3350.26Show/hide
Query:  MMEDQKAEQEKTRKDIEELQEKLYAILLVLEKGKRL-------------------RILLHLATLSMSRKKPHFIHLDTVH---------------LLGNS
        M +D+K+EQEKTRKDIEEL+EKL AILL LEKGK +                         A  S       F+   T +               + G  
Subjt:  MMEDQKAEQEKTRKDIEELQEKLYAILLVLEKGKRL-------------------RILLHLATLSMSRKKPHFIHLDTVH---------------LLGNS

Query:  ANPSQHHFSKPEQMMSPPTVLNLGALPTKTNPVRQTAPSNEKFEVLEERLRIVEETDVFGNIDASQLYLVSGLVIPPKFKMPEFKKYDGSSCP
          P+   F +PEQ+++PPTVLNLG      +P RQ APS+EK EVLEERLR VE TDVFGNIDASQL L SGLVIPPKFK+PEF+KYDGSSCP
Subjt:  ANPSQHHFSKPEQMMSPPTVLNLGALPTKTNPVRQTAPSNEKFEVLEERLRIVEETDVFGNIDASQLYLVSGLVIPPKFKMPEFKKYDGSSCP

A0A6J1DZ90 Ribonuclease H9.2e-3654.17Show/hide
Query:  MEDQKAEQEKTRKDIEELQEKLYAILLVLEKGKRLRILLHLATLSMSRKKPH-------------------FIHLDTVH---------------LLGNSA
        MEDQKAEQEKTRKDIEEL+EKL  I L LEKGK        AT S    +P                    F+   T +               + G   
Subjt:  MEDQKAEQEKTRKDIEELQEKLYAILLVLEKGKRLRILLHLATLSMSRKKPH-------------------FIHLDTVH---------------LLGNSA

Query:  NPSQHHFSKPEQMMSPPTVLNLGALPTKTNPVRQTAPSNEKFEVLEERLRIVEETDVFGNIDASQLYLVSGLVIPPKFKMPEFKKYDGSSCP
         P+   F +PEQMMSPPTV NLG  P KT+PV Q A S EK EVLEERLR +E TDVFGNIDASQL LVSGLVIPPKFK+PEF+KYDGSSCP
Subjt:  NPSQHHFSKPEQMMSPPTVLNLGALPTKTNPVRQTAPSNEKFEVLEERLRIVEETDVFGNIDASQLYLVSGLVIPPKFKMPEFKKYDGSSCP

A0A6J1E2J7 Ribonuclease H2.4e-2883.75Show/hide
Query:  MMSPPTVLNLGALPTKTNPVRQTAPSNEKFEVLEERLRIVEETDVFGNIDASQLYLVSGLVIPPKFKMPEFKKYDGSSCP
        MMSPPTVLNLG LP KT+ V Q APSNEKFEVLEERLR +E T VFGNIDASQL LVSGLVIPPKFK+PEF+KYDGSSCP
Subjt:  MMSPPTVLNLGALPTKTNPVRQTAPSNEKFEVLEERLRIVEETDVFGNIDASQLYLVSGLVIPPKFKMPEFKKYDGSSCP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAAGATCAAAAAGCTGAGCAGGAGAAAACAAGGAAAGATATTGAGGAGTTGCAGGAAAAGTTATATGCCATCCTCCTCGTGTTGGAAAAAGGCAAGCGG
CTACGAATCCTGCTACATCTAGCAACCCTGTCCATGAGTCGCAAGAAACCACACTTTATCCACCTGGATACGGTCCACCTCTTAGGGAACTCAGCAAATCCCAGT
CAACATCATTTTTCGAAGCCCGAGCAAATGATGTCACCCCCTACAGTCCTTAATCTAGGTGCTCTCCCAACCAAGACAAACCCAGTCAGACAAACTGCCCCCAGT
AACGAGAAGTTCGAAGTTCTGGAGGAAAGATTAAGAATTGTAGAAGAGACAGACGTTTTTGGCAATATTGATGCATCTCAATTATATTTGGTTTCTGGATTAGTC
ATCCCTCCAAAATTTAAGATGCCAGAATTCAAGAAATATGATGGTTCTTCTTGTCCTAACTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGGAAGATCAAAAAGCTGAGCAGGAGAAAACAAGGAAAGATATTGAGGAGTTGCAGGAAAAGTTATATGCCATCCTCCTCGTGTTGGAAAAAGGCAAGCGG
CTACGAATCCTGCTACATCTAGCAACCCTGTCCATGAGTCGCAAGAAACCACACTTTATCCACCTGGATACGGTCCACCTCTTAGGGAACTCAGCAAATCCCAGT
CAACATCATTTTTCGAAGCCCGAGCAAATGATGTCACCCCCTACAGTCCTTAATCTAGGTGCTCTCCCAACCAAGACAAACCCAGTCAGACAAACTGCCCCCAGT
AACGAGAAGTTCGAAGTTCTGGAGGAAAGATTAAGAATTGTAGAAGAGACAGACGTTTTTGGCAATATTGATGCATCTCAATTATATTTGGTTTCTGGATTAGTC
ATCCCTCCAAAATTTAAGATGCCAGAATTCAAGAAATATGATGGTTCTTCTTGTCCTAACTTATAA
Protein sequenceShow/hide protein sequence
MMEDQKAEQEKTRKDIEELQEKLYAILLVLEKGKRLRILLHLATLSMSRKKPHFIHLDTVHLLGNSANPSQHHFSKPEQMMSPPTVLNLGALPTKTNPVRQTAPS
NEKFEVLEERLRIVEETDVFGNIDASQLYLVSGLVIPPKFKMPEFKKYDGSSCPNL