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Moc07g21180 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g21180
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr7:15447110..15447625
RNA-Seq ExpressionMoc07g21180
SyntenyMoc07g21180
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156327.1 uncharacterized protein LOC111023248 [Momordica charantia]2.1e-6980.46Show/hide
Query:  MDRSMIDAASGGALVDKTPEAAKQLTSNIVENFQQFGFRIGGSVTQVNEVSELKSQISDLTALVRQIVVGEKSREMYALQGYPTNTFPQFQQDSIQEANA
        MDRSMIDAASG ALVDKTPEAAK L  N+ EN QQFGFR GGSVTQVNEVSELKSQISDLT LVRQI VGEK REMYALQGYPTNTFPQFQQD IQE  A
Subjt:  MDRSMIDAASGGALVDKTPEAAKQLTSNIVENFQQFGFRIGGSVTQVNEVSELKSQISDLTALVRQIVVGEKSREMYALQGYPTNTFPQFQQDSIQEANA

Query:  VRRFPDPPQRNYDPCSNYYNPGWRDHPNISYRNQNFIRPPPPSTQ----NAGMSLEDIVRNLANSTLQFQQETK
        + RF   PQRNYDP +N+YNPGWRDHPN+SY NQNFIRPPPP  Q    N+GMSLE+IV+NLANSTLQFQQET+
Subjt:  VRRFPDPPQRNYDPCSNYYNPGWRDHPNISYRNQNFIRPPPPSTQ----NAGMSLEDIVRNLANSTLQFQQETK

XP_038972621.1 uncharacterized protein LOC120104835 [Phoenix dactylifera]8.0e-4051.03Show/hide
Query:  DRSMIDAASGGALVDKTPEAAKQLTSNIVENFQQFGFRIGGSVTQVNEV--SELKSQISDLTALVRQIVVG----EKSREMYALQGYPTNTFPQFQQDSI
        +RSMIDAASGGALVDKTPE A+ L +N+  N QQFG R+      VNEV  S L+ QI+ LT+LVRQ+ VG    EK+  + ++ G+PT+  P  Q++  
Subjt:  DRSMIDAASGGALVDKTPEAAKQLTSNIVENFQQFGFRIGGSVTQVNEV--SELKSQISDLTALVRQIVVG----EKSREMYALQGYPTNTFPQFQQDSI

Query:  QEANAVRRFPDPPQRNYDPCSNYYNPGWRDHPNISYRN--------------QNFIRPPPP-----STQNAGMSLEDIVRNLANSTLQFQQETK
        ++ NA   FP  PQR YDP S+ YNPGWRDHPN++Y+N              Q + +P PP      T N+GMSLEDIVR LA +TLQFQQETK
Subjt:  QEANAVRRFPDPPQRNYDPCSNYYNPGWRDHPNISYRN--------------QNFIRPPPP-----STQNAGMSLEDIVRNLANSTLQFQQETK

XP_038978616.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120108957 [Phoenix dactylifera]9.4e-4155.06Show/hide
Query:  DRSMIDAASGGALVDKTPEAAKQLTSNIVENFQQFGFRIGGSVTQVNEV--SELKSQISDLTALVRQIVVG----EKSREMYALQGYPTNTFPQFQQDSI
        +RSMIDAASGGALVDKTPE A+ L +N+  N QQFG R+      VNEV  S L+ QI+ LT+LVRQ+ VG    EK+  + ++ G+PT+  P  Q++  
Subjt:  DRSMIDAASGGALVDKTPEAAKQLTSNIVENFQQFGFRIGGSVTQVNEV--SELKSQISDLTALVRQIVVG----EKSREMYALQGYPTNTFPQFQQDSI

Query:  QEANAVRRFPDPPQRNYDPCSNYYNPGWRDHPNISYRNQNFIRPP---PPSTQNAGMSLEDIVRNLANSTLQFQQETK
        ++ NA   FP  PQR YDP S+ YN GWRDHPN+SYRN     PP   P  T N+GMSLEDIV+ LA +TLQFQQETK
Subjt:  QEANAVRRFPDPPQRNYDPCSNYYNPGWRDHPNISYRNQNFIRPP---PPSTQNAGMSLEDIVRNLANSTLQFQQETK

XP_038978941.1 uncharacterized protein LOC120109260, partial [Phoenix dactylifera]3.6e-4051.55Show/hide
Query:  DRSMIDAASGGALVDKTPEAAKQLTSNIVENFQQFGFRIGGSVTQVNEV--SELKSQISDLTALVRQIVVG----EKSREMYALQGYPTNTFPQFQQDSI
        +RSMIDAASGGALVDKTPE A+ L +N+  N QQFG R+      VNEV  S L+ QI+ LT+LVRQ+ VG    EK+  + ++ G+PT+  P  Q++  
Subjt:  DRSMIDAASGGALVDKTPEAAKQLTSNIVENFQQFGFRIGGSVTQVNEV--SELKSQISDLTALVRQIVVG----EKSREMYALQGYPTNTFPQFQQDSI

Query:  QEANAVRRFPDPPQRNYDPCSNYYNPGWRDHPNISYRN--------------QNFIRPPPP-----STQNAGMSLEDIVRNLANSTLQFQQETK
        ++ NA   FP  PQR YDP S+ YNPGWRDHPN+SYRN              Q + +P PP      T N+GMSLEDIV+ LA +TLQFQQETK
Subjt:  QEANAVRRFPDPPQRNYDPCSNYYNPGWRDHPNISYRN--------------QNFIRPPPP-----STQNAGMSLEDIVRNLANSTLQFQQETK

XP_038979056.1 uncharacterized protein LOC120109374 [Phoenix dactylifera]3.0e-3951.03Show/hide
Query:  DRSMIDAASGGALVDKTPEAAKQLTSNIVENFQQFGFRIGGSVTQVNEV--SELKSQISDLTALVRQIVVG----EKSREMYALQGYPTNTFPQFQQDSI
        +RSMIDAASGGALVDKTPE A+ L +N+  N QQFG R+      VNEV  S L+ QI+ LT+LVRQ+ VG    EK+  + ++ G+PT+  P  Q++  
Subjt:  DRSMIDAASGGALVDKTPEAAKQLTSNIVENFQQFGFRIGGSVTQVNEV--SELKSQISDLTALVRQIVVG----EKSREMYALQGYPTNTFPQFQQDSI

Query:  QEANAVRRFPDPPQRNYDPCSNYYNPGWRDHPNISYRN--------------QNFIRPPPP-----STQNAGMSLEDIVRNLANSTLQFQQETK
        ++ NA   FP  PQR YDP S+ YN GWRDHPN+SYRN              Q + +P PP      T N+GMSLEDIV+ LA +TLQFQQETK
Subjt:  QEANAVRRFPDPPQRNYDPCSNYYNPGWRDHPNISYRN--------------QNFIRPPPP-----STQNAGMSLEDIVRNLANSTLQFQQETK

TrEMBL top hitse value%identityAlignment
A0A2G9GEL6 Retrotrans_gag domain-containing protein4.7e-3852.69Show/hide
Query:  MDRSMIDAASGGALVDKTPEAAKQLTSNIVENFQQFGFRIGGSVTQVNEV--SELKSQISDLTALVRQIVVGE----KSREMYALQGYPTNTFPQFQQDS
        M+R M+DAASGGA+V+KTP  A+ L S +  N QQFGF    S  +VNEV  S L+ QIS+LT+LV+Q+V G+    K+  + A  G+PT+  P  Q+DS
Subjt:  MDRSMIDAASGGALVDKTPEAAKQLTSNIVENFQQFGFRIGGSVTQVNEV--SELKSQISDLTALVRQIVVGE----KSREMYALQGYPTNTFPQFQQDS

Query:  IQEANAVRRFPDPPQRNYDPCSNYYNPGWRDHPNISY-----RNQNF----IRPPPPSTQNAGMSLEDIVRNLANSTLQFQQETKD
         + ANAV  FP PPQR YDP SN YNPGWRDHPN+SY       QNF      PPP S+  +GM LE+IV++LA +T QFQQET++
Subjt:  IQEANAVRRFPDPPQRNYDPCSNYYNPGWRDHPNISY-----RNQNF----IRPPPPSTQNAGMSLEDIVRNLANSTLQFQQETKD

A0A2G9I3Q1 Retrotrans_gag domain-containing protein1.2e-3853.23Show/hide
Query:  MDRSMIDAASGGALVDKTPEAAKQLTSNIVENFQQFGFRIGGSVTQVNEV--SELKSQISDLTALVRQIVVGE----KSREMYALQGYPTNTFPQFQQDS
        M+R M+DAASGGA+V+KTP  A+ L S +  N QQFGF    S  +VNEV  S L+ QIS+LT+LV+Q+VVG+    K+  + A  G+PT+  P  Q+DS
Subjt:  MDRSMIDAASGGALVDKTPEAAKQLTSNIVENFQQFGFRIGGSVTQVNEV--SELKSQISDLTALVRQIVVGE----KSREMYALQGYPTNTFPQFQQDS

Query:  IQEANAVRRFPDPPQRNYDPCSNYYNPGWRDHPNISY-----RNQNF----IRPPPPSTQNAGMSLEDIVRNLANSTLQFQQETKD
         + ANAV  FP PPQR YDP SN YNPGWRDHPN+SY       QNF      PPP S+  +GM LE+IV++LA +T QFQQET++
Subjt:  IQEANAVRRFPDPPQRNYDPCSNYYNPGWRDHPNISY-----RNQNF----IRPPPPSTQNAGMSLEDIVRNLANSTLQFQQETKD

A0A6A3AMH9 tRNA dimethylallyltransferase 29.5e-3953.63Show/hide
Query:  MDRSMIDAASGGALVDKTPEAAKQLTSNIVENFQQFGFRIGGSVTQVNEV--SELKSQISDLTALVRQIVVGE----KSREMYALQGYPTNTFPQFQQDS
        M+R M+DAASGGA+V+KTP  A++L S +  N QQFGFR   S  +VNEV  S ++ Q+S LT+LV+Q+VV +    K+  + A  GYPT+  P  Q DS
Subjt:  MDRSMIDAASGGALVDKTPEAAKQLTSNIVENFQQFGFRIGGSVTQVNEV--SELKSQISDLTALVRQIVVGE----KSREMYALQGYPTNTFPQFQQDS

Query:  IQEANAVRRFPDPPQRNYDPCSNYYNPGWRDHPNISY--RNQNFIR-PPPPSTQNAGMSLEDIVRNLANSTLQFQQETK
         +  NAV RFPDPPQ  YDP SN YNPGWRDHPN++Y  R+  F R PP  S+   GMSLE+IV++L  +T QFQQET+
Subjt:  IQEANAVRRFPDPPQRNYDPCSNYYNPGWRDHPNISY--RNQNFIR-PPPPSTQNAGMSLEDIVRNLANSTLQFQQETK

A0A6J1DRS5 uncharacterized protein LOC1110232481.0e-6980.46Show/hide
Query:  MDRSMIDAASGGALVDKTPEAAKQLTSNIVENFQQFGFRIGGSVTQVNEVSELKSQISDLTALVRQIVVGEKSREMYALQGYPTNTFPQFQQDSIQEANA
        MDRSMIDAASG ALVDKTPEAAK L  N+ EN QQFGFR GGSVTQVNEVSELKSQISDLT LVRQI VGEK REMYALQGYPTNTFPQFQQD IQE  A
Subjt:  MDRSMIDAASGGALVDKTPEAAKQLTSNIVENFQQFGFRIGGSVTQVNEVSELKSQISDLTALVRQIVVGEKSREMYALQGYPTNTFPQFQQDSIQEANA

Query:  VRRFPDPPQRNYDPCSNYYNPGWRDHPNISYRNQNFIRPPPPSTQ----NAGMSLEDIVRNLANSTLQFQQETK
        + RF   PQRNYDP +N+YNPGWRDHPN+SY NQNFIRPPPP  Q    N+GMSLE+IV+NLANSTLQFQQET+
Subjt:  VRRFPDPPQRNYDPCSNYYNPGWRDHPNISYRNQNFIRPPPPSTQ----NAGMSLEDIVRNLANSTLQFQQETK

A0A7J0FIA0 Uncharacterized protein2.5e-3950.52Show/hide
Query:  DRSMIDAASGGALVDKTPEAAKQLTSNIVENFQQFGFRIGGSVTQVNEV--SELKSQISDLTALVRQIVVGE----KSREMYALQGYPTNTFPQFQQDSI
        DRSMIDAASGGALVDKTPEAA+ L +N+  N QQFG R+      VNEV  S L+ QI+ LT+LVRQ+ VG     K   + +++G+PT+  P  Q++ I
Subjt:  DRSMIDAASGGALVDKTPEAAKQLTSNIVENFQQFGFRIGGSVTQVNEV--SELKSQISDLTALVRQIVVGE----KSREMYALQGYPTNTFPQFQQDSI

Query:  QEANAVRRFPDPPQRNYDPCSNYYNPGWRDHPNISYRN--------------QNFIRPPPP-----STQNAGMSLEDIVRNLANSTLQFQQETK
        ++ NA   FP  PQR +DP S  YNPGWRDHPN  Y N              Q + +P PP      T N+GMSLEDIV++LA +T+QFQQETK
Subjt:  QEANAVRRFPDPPQRNYDPCSNYYNPGWRDHPNISYRN--------------QNFIRPPPP-----STQNAGMSLEDIVRNLANSTLQFQQETK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGGAGTATGATCGATGCAGCTAGTGGAGGAGCTTTGGTAGATAAAACGCCAGAAGCAGCCAAGCAACTAACTTCAAACATAGTTGAAAACTTCCAACAATTTGG
ATTTAGAATAGGAGGATCTGTTACACAAGTCAACGAGGTAAGTGAACTTAAAAGTCAAATTTCCGATCTAACTGCTTTAGTTCGTCAAATTGTTGTAGGAGAAAAGTCAC
GTGAAATGTATGCACTTCAAGGATATCCTACAAATACATTCCCTCAATTTCAACAAGATTCCATTCAGGAGGCCAATGCGGTAAGAAGATTTCCTGATCCTCCACAAAGA
AACTATGATCCATGCTCCAATTATTATAATCCTGGATGGAGAGACCACCCAAATATAAGCTACAGGAATCAAAACTTCATTAGACCACCTCCACCTTCTACGCAAAATGC
AGGTATGTCTCTAGAGGATATTGTTAGAAATCTTGCTAATAGTACTCTTCAATTTCAACAGGAAACAAAGGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATAGGAGTATGATCGATGCAGCTAGTGGAGGAGCTTTGGTAGATAAAACGCCAGAAGCAGCCAAGCAACTAACTTCAAACATAGTTGAAAACTTCCAACAATTTGG
ATTTAGAATAGGAGGATCTGTTACACAAGTCAACGAGGTAAGTGAACTTAAAAGTCAAATTTCCGATCTAACTGCTTTAGTTCGTCAAATTGTTGTAGGAGAAAAGTCAC
GTGAAATGTATGCACTTCAAGGATATCCTACAAATACATTCCCTCAATTTCAACAAGATTCCATTCAGGAGGCCAATGCGGTAAGAAGATTTCCTGATCCTCCACAAAGA
AACTATGATCCATGCTCCAATTATTATAATCCTGGATGGAGAGACCACCCAAATATAAGCTACAGGAATCAAAACTTCATTAGACCACCTCCACCTTCTACGCAAAATGC
AGGTATGTCTCTAGAGGATATTGTTAGAAATCTTGCTAATAGTACTCTTCAATTTCAACAGGAAACAAAGGACTAG
Protein sequenceShow/hide protein sequence
MDRSMIDAASGGALVDKTPEAAKQLTSNIVENFQQFGFRIGGSVTQVNEVSELKSQISDLTALVRQIVVGEKSREMYALQGYPTNTFPQFQQDSIQEANAVRRFPDPPQR
NYDPCSNYYNPGWRDHPNISYRNQNFIRPPPPSTQNAGMSLEDIVRNLANSTLQFQQETKD